RNA–Protein interactions for RNA: ENST00000470563.5

RBM39-227, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 384 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-227ENST00000470563 GP6Q9HCN6 339 aa7.7□□□□□ -1.18
RBM39-227ENST00000470563 TYW1Q9NV66 732 aaKnown RBP7.7□□□□□ -1.18
RBM39-227ENST00000470563 USP21Q9UK80 565 aa7.7□□□□□ -1.18
RBM39-227ENST00000470563 ADAMTS8Q9UP79 889 aa7.7□□□□□ -1.18
RBM39-227ENST00000470563 COL4A3BPQ9Y5P4 624 aa7.7□□□□□ -1.18
RBM39-227ENST00000470563 hCG_2014768A0A024R1R8 64 aa7.69□□□□□ -1.18
RBM39-227ENST00000470563 IGF2BP3O00425 579 aaKnown RBP eCLIP7.69□□□□□ -1.18
RBM39-227ENST00000470563 SCG5P05408 212 aa7.69□□□□□ -1.18
RBM39-227ENST00000470563 ITGAVP06756 1048 aa7.69□□□□□ -1.18
RBM39-227ENST00000470563 GLB1P16278 677 aa7.69□□□□□ -1.18
RBM39-227ENST00000470563 PPP2R2AP63151 447 aa7.69□□□□□ -1.18
RBM39-227ENST00000470563 SUMO1P63165 101 aaKnown RBP7.69□□□□□ -1.18
RBM39-227ENST00000470563 SV2CQ496J9 727 aa7.69□□□□□ -1.18
RBM39-227ENST00000470563 GPAT2Q6NUI2 795 aa7.69□□□□□ -1.18
RBM39-227ENST00000470563 EXOC2Q96KP1 924 aa7.69□□□□□ -1.18
RBM39-227ENST00000470563 MIPEPQ99797 713 aa7.69□□□□□ -1.18
RBM39-227ENST00000470563 MKRN2Q9H000 416 aaKnown RBP7.69□□□□□ -1.18
RBM39-227ENST00000470563 APEX2Q9UBZ4 518 aa7.69□□□□□ -1.18
RBM39-227ENST00000470563 MRPS23Q9Y3D9 190 aaKnown RBP7.69□□□□□ -1.18
RBM39-227ENST00000470563 ZNF451Q9Y4E5 1061 aa7.69□□□□□ -1.18
RBM39-227ENST00000470563 PCDHB12Q9Y5F1 795 aa7.69□□□□□ -1.18
RBM39-227ENST00000470563 TRBV23-1A0A0A0MS06 115 aa7.68□□□□□ -1.18
RBM39-227ENST00000470563 ALX3O95076 343 aa7.68□□□□□ -1.18
RBM39-227ENST00000470563 EOMESO95936 686 aa7.68□□□□□ -1.18
RBM39-227ENST00000470563 NFICP08651 508 aa7.68□□□□□ -1.18
RBM39-227ENST00000470563 MAP4P27816 1152 aaKnown RBP7.68□□□□□ -1.18
RBM39-227ENST00000470563 MAP4K2Q12851 820 aa7.68□□□□□ -1.18
RBM39-227ENST00000470563 TDRD10Q5VZ19 366 aaKnown RBP7.68□□□□□ -1.18
RBM39-227ENST00000470563 DCAF15Q66K64 600 aa7.68□□□□□ -1.18
RBM39-227ENST00000470563 FAM214BQ7L5A3 538 aa7.68□□□□□ -1.18
RBM39-227ENST00000470563 ENOX1Q8TC92 643 aaKnown RBP7.68□□□□□ -1.18
RBM39-227ENST00000470563 CNTNAP5Q8WYK1 1306 aa7.68□□□□□ -1.18
RBM39-227ENST00000470563 FAM86C2PA6NEL3 165 aa7.67□□□□□ -1.18
RBM39-227ENST00000470563 TP53P04637 393 aaPredicted RBP7.67□□□□□ -1.18
RBM39-227ENST00000470563 ZNF865P0CJ78 1059 aaPredicted RBP7.67□□□□□ -1.18
RBM39-227ENST00000470563 RAB6AP20340 208 aa7.67□□□□□ -1.18
RBM39-227ENST00000470563 CDK11BP21127 795 aaKnown RBP7.67□□□□□ -1.18
RBM39-227ENST00000470563 TESK1Q15569 626 aa7.67□□□□□ -1.18
RBM39-227ENST00000470563 SGO2Q562F6 1265 aa7.67□□□□□ -1.18
RBM39-227ENST00000470563 FOXB2Q5VYV0 432 aa7.67□□□□□ -1.18
RBM39-227ENST00000470563 CLEC10AQ8IUN9 316 aa7.67□□□□□ -1.18
RBM39-227ENST00000470563 PIWIL2Q8TC59 973 aaKnown RBP7.67□□□□□ -1.18
RBM39-227ENST00000470563 FBLIM1Q8WUP2 373 aa7.67□□□□□ -1.18
RBM39-227ENST00000470563 UTP4Q969X6 686 aaKnown RBP7.67□□□□□ -1.18
RBM39-227ENST00000470563 DAGLAQ9Y4D2 1042 aa7.67□□□□□ -1.18
RBM39-227ENST00000470563 CD2APQ9Y5K6 639 aa7.67□□□□□ -1.18
RBM39-227ENST00000470563 ZCCHC6Q5VYS8 1495 aaKnown RBP7.67□□□□□ -1.18
RBM39-227ENST00000470563 FAM95CA0A1B0GW59 222 aa7.66□□□□□ -1.18
RBM39-227ENST00000470563 NOP56O00567 594 aaKnown RBP7.66□□□□□ -1.18
RBM39-227ENST00000470563 IREB2P48200 963 aaKnown RBP7.66□□□□□ -1.18
RBM39-227ENST00000470563 ZNF445P59923 1031 aa7.66□□□□□ -1.18
RBM39-227ENST00000470563 INSM1Q01101 510 aaPredicted RBP7.66□□□□□ -1.18
RBM39-227ENST00000470563 PAOXQ6QHF9 649 aa7.66□□□□□ -1.18
RBM39-227ENST00000470563 NIM1KQ8IY84 436 aa7.66□□□□□ -1.18
RBM39-227ENST00000470563 LRRN4CLQ8ND94 238 aa7.66□□□□□ -1.18
RBM39-227ENST00000470563 GATA6Q92908 595 aa7.66□□□□□ -1.18
RBM39-227ENST00000470563 OSBP2Q969R2 916 aa7.66□□□□□ -1.18
RBM39-227ENST00000470563 MEGF10Q96KG7 1140 aa7.66□□□□□ -1.18
RBM39-227ENST00000470563 FAM83CQ9BQN1 747 aa7.66□□□□□ -1.18
RBM39-227ENST00000470563 DUSP23Q9BVJ7 150 aa7.66□□□□□ -1.18
RBM39-227ENST00000470563 CWC22Q9HCG8 908 aaKnown RBP7.66□□□□□ -1.18
RBM39-227ENST00000470563 CGGBP1Q9UFW8 167 aaPredicted RBP7.66□□□□□ -1.18
RBM39-227ENST00000470563 SIGLEC6O43699 453 aa7.65□□□□□ -1.18
RBM39-227ENST00000470563 PABPC1P11940 636 aaKnown RBP7.65□□□□□ -1.18
RBM39-227ENST00000470563 BMP3P12645 472 aa7.65□□□□□ -1.18
RBM39-227ENST00000470563 ANAPC15P60006 121 aa7.65□□□□□ -1.18
RBM39-227ENST00000470563 AMPD3Q01432 767 aa7.65□□□□□ -1.18
RBM39-227ENST00000470563 PABPC4Q13310 644 aaKnown RBP eCLIP7.65□□□□□ -1.18
RBM39-227ENST00000470563 THNSL2Q86YJ6 484 aa7.65□□□□□ -1.18
RBM39-227ENST00000470563 GSTCDQ8NEC7 633 aa7.65□□□□□ -1.18
RBM39-227ENST00000470563 RIN3Q8TB24 985 aa7.65□□□□□ -1.18
RBM39-227ENST00000470563 IPO9Q96P70 1041 aaKnown RBP7.65□□□□□ -1.18
RBM39-227ENST00000470563 MKNK2Q9HBH9 465 aa7.65□□□□□ -1.18
RBM39-227ENST00000470563 KCNH3Q9ULD8 1083 aa7.65□□□□□ -1.18
RBM39-227ENST00000470563 MAPRE3Q9UPY8 281 aa7.65□□□□□ -1.18
RBM39-227ENST00000470563 DHX15O43143 795 aaKnown RBP7.64□□□□□ -1.19
RBM39-227ENST00000470563 DYNC1LI2O43237 492 aaPredicted RBP7.64□□□□□ -1.19
RBM39-227ENST00000470563 EFCAB14O75071 495 aa7.64□□□□□ -1.19
RBM39-227ENST00000470563 NPTXRO95502 500 aa7.64□□□□□ -1.19
RBM39-227ENST00000470563 CPP00450 1065 aa7.64□□□□□ -1.19
RBM39-227ENST00000470563 POU3F2P20265 443 aaPredicted RBP7.64□□□□□ -1.19
RBM39-227ENST00000470563 HOXC12P31275 282 aa7.64□□□□□ -1.19
RBM39-227ENST00000470563 STAT3P40763 770 aa7.64□□□□□ -1.19
RBM39-227ENST00000470563 CDH24Q86UP0 819 aa7.64□□□□□ -1.19
RBM39-227ENST00000470563 XAGE3Q8WTP9 111 aa7.64□□□□□ -1.19
RBM39-227ENST00000470563 NKX2-4Q9H2Z4 354 aa7.64□□□□□ -1.19
RBM39-227ENST00000470563 METTL14Q9HCE5 456 aaKnown RBP7.64□□□□□ -1.19
RBM39-227ENST00000470563 LRP2BPQ9P2M1 347 aa7.64□□□□□ -1.19
RBM39-227ENST00000470563 MAGEC2Q9UBF1 373 aaPredicted RBP7.64□□□□□ -1.19
RBM39-227ENST00000470563 AKT3Q9Y243 479 aa7.64□□□□□ -1.19
RBM39-227ENST00000470563 SF3B6Q9Y3B4 125 aaKnown RBP7.64□□□□□ -1.19
RBM39-227ENST00000470563 A0A087X0B3 334 aa7.63□□□□□ -1.19
RBM39-227ENST00000470563 C6orf222P0C671 652 aaPredicted RBP7.63□□□□□ -1.19
RBM39-227ENST00000470563 SRFP11831 508 aa7.63□□□□□ -1.19
RBM39-227ENST00000470563 GFRA1P56159 465 aa7.63□□□□□ -1.19
RBM39-227ENST00000470563 GABREP78334 506 aa7.63□□□□□ -1.19
RBM39-227ENST00000470563 RBM10P98175 930 aaKnown RBP7.63□□□□□ -1.19
RBM39-227ENST00000470563 CPSF6Q16630 551 aaKnown RBP eCLIP7.63□□□□□ -1.19
RBM39-227ENST00000470563 FAM209AQ5JX71 171 aa7.63□□□□□ -1.19
RBM39-227ENST00000470563 SFRP5Q5T4F7 317 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms