RNA–Protein interactions for RNA: ENST00000470537.1

XRN1-208, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-208ENST00000470537 WDR78Q5VTH9 848 aa10.82□□□□□ -0.68
XRN1-208ENST00000470537 FEZ1Q99689 392 aa10.82□□□□□ -0.68
XRN1-208ENST00000470537 TXNRD2Q9NNW7 524 aa10.82□□□□□ -0.68
XRN1-208ENST00000470537 DDX20Q9UHI6 824 aaKnown RBP10.82□□□□□ -0.68
XRN1-208ENST00000470537 KBTBD13C9JR72 458 aa10.81□□□□□ -0.68
XRN1-208ENST00000470537 HOXC6P09630 235 aa10.81□□□□□ -0.68
XRN1-208ENST00000470537 PTGDRQ13258 359 aa10.81□□□□□ -0.68
XRN1-208ENST00000470537 MTX1Q13505 466 aa10.81□□□□□ -0.68
XRN1-208ENST00000470537 Q3C1V9 767 aa10.81□□□□□ -0.68
XRN1-208ENST00000470537 TMED8Q6PL24 325 aaPredicted RBP10.81□□□□□ -0.68
XRN1-208ENST00000470537 TBC1D9Q6ZT07 1266 aa10.81□□□□□ -0.68
XRN1-208ENST00000470537 SH3RF3Q8TEJ3 882 aaPredicted RBP10.81□□□□□ -0.68
XRN1-208ENST00000470537 TGFBRAP1Q8WUH2 860 aa10.81□□□□□ -0.68
XRN1-208ENST00000470537 AATFQ9NY61 560 aaKnown RBP eCLIP10.81□□□□□ -0.68
XRN1-208ENST00000470537 NOB1Q9ULX3 412 aaKnown RBP10.81□□□□□ -0.68
XRN1-208ENST00000470537 RNF223E7ERA6 249 aa10.8□□□□□ -0.68
XRN1-208ENST00000470537 SMAD3P84022 425 aaKnown RBP10.8□□□□□ -0.68
XRN1-208ENST00000470537 SLFN5Q08AF3 891 aa10.8□□□□□ -0.68
XRN1-208ENST00000470537 CCL14Q16627 93 aa10.8□□□□□ -0.68
XRN1-208ENST00000470537 ZNF787Q6DD87 383 aa10.8□□□□□ -0.68
XRN1-208ENST00000470537 DPP9Q86TI2 863 aa10.8□□□□□ -0.68
XRN1-208ENST00000470537 ZNF384Q8TF68 577 aa10.8□□□□□ -0.68
XRN1-208ENST00000470537 ARHGAP45Q92619 1136 aa10.8□□□□□ -0.68
XRN1-208ENST00000470537 C12orf42Q96LP6 360 aa10.8□□□□□ -0.68
XRN1-208ENST00000470537 FAM161BQ96MY7 647 aa10.8□□□□□ -0.68
XRN1-208ENST00000470537 GUCD1Q96NT3 240 aa10.8□□□□□ -0.68
XRN1-208ENST00000470537 PORCNQ9H237 461 aa10.8□□□□□ -0.68
XRN1-208ENST00000470537 CABP5Q9NP86 173 aa10.8□□□□□ -0.68
XRN1-208ENST00000470537 HOXC10Q9NYD6 342 aa10.8□□□□□ -0.68
XRN1-208ENST00000470537 ZBTB21Q9ULJ3 1066 aa10.8□□□□□ -0.68
XRN1-208ENST00000470537 ATAD5Q96QE3 1844 aa10.79□□□□□ -0.68
XRN1-208ENST00000470537 IPO8O15397 1037 aaKnown RBP10.79□□□□□ -0.68
XRN1-208ENST00000470537 TLL1O43897 1013 aa10.79□□□□□ -0.68
XRN1-208ENST00000470537 SLC19A1P41440 591 aa10.79□□□□□ -0.68
XRN1-208ENST00000470537 RRP1BQ14684 758 aaKnown RBP10.79□□□□□ -0.68
XRN1-208ENST00000470537 TTC39AQ5SRH9 613 aa10.79□□□□□ -0.68
XRN1-208ENST00000470537 LBX2Q6XYB7 198 aa10.79□□□□□ -0.68
XRN1-208ENST00000470537 TTC6Q86TZ1 520 aa10.79□□□□□ -0.68
XRN1-208ENST00000470537 MAPKAPK5Q8IW41 473 aa10.79□□□□□ -0.68
XRN1-208ENST00000470537 MAFAQ8NHW3 353 aaPredicted RBP10.79□□□□□ -0.68
XRN1-208ENST00000470537 CDX2Q99626 313 aaPredicted RBP10.79□□□□□ -0.68
XRN1-208ENST00000470537 KIAA1683Q9H0B3 1180 aa10.79□□□□□ -0.68
XRN1-208ENST00000470537 SEMA6BQ9H3T3 888 aa10.79□□□□□ -0.68
XRN1-208ENST00000470537 TMEM134Q9H6X4 195 aa10.79□□□□□ -0.68
XRN1-208ENST00000470537 PALD1Q9ULE6 856 aa10.79□□□□□ -0.68
XRN1-208ENST00000470537 FLT1P17948 1338 aa10.79□□□□□ -0.68
XRN1-208ENST00000470537 TMEM265A0A087WTH1 108 aa10.78□□□□□ -0.68
XRN1-208ENST00000470537 GDF11O95390 407 aa10.78□□□□□ -0.68
XRN1-208ENST00000470537 GH2P01242 217 aa10.78□□□□□ -0.68
XRN1-208ENST00000470537 GNAI2P04899 355 aa10.78□□□□□ -0.68
XRN1-208ENST00000470537 MCAMP43121 646 aa10.78□□□□□ -0.68
XRN1-208ENST00000470537 RTP1P59025 263 aa10.78□□□□□ -0.68
XRN1-208ENST00000470537 GRB14Q14449 540 aa10.78□□□□□ -0.68
XRN1-208ENST00000470537 CERKLQ49MI3 558 aaPredicted RBP10.78□□□□□ -0.68
XRN1-208ENST00000470537 KMT5BQ4FZB7 885 aa10.78□□□□□ -0.68
XRN1-208ENST00000470537 SLC39A5Q6ZMH5 540 aa10.78□□□□□ -0.68
XRN1-208ENST00000470537 CATSPERGQ6ZRH7 1159 aa10.78□□□□□ -0.68
XRN1-208ENST00000470537 KCNV2Q8TDN2 545 aa10.78□□□□□ -0.68
XRN1-208ENST00000470537 MEIS3Q99687 375 aa10.78□□□□□ -0.68
XRN1-208ENST00000470537 GPR108Q9NPR9 543 aa10.78□□□□□ -0.68
XRN1-208ENST00000470537 PRDM6Q9NQX0 595 aa10.78□□□□□ -0.68
XRN1-208ENST00000470537 SERPINB13Q9UIV8 391 aa10.78□□□□□ -0.68
XRN1-208ENST00000470537 ATP11BQ9Y2G3 1177 aa10.78□□□□□ -0.68
XRN1-208ENST00000470537 ADGRG1Q9Y653 693 aa10.78□□□□□ -0.68
XRN1-208ENST00000470537 PLXNB2O15031 1838 aa10.77□□□□□ -0.68
XRN1-208ENST00000470537 USP5P45974 858 aa10.77□□□□□ -0.69
XRN1-208ENST00000470537 COG2Q14746 738 aa10.77□□□□□ -0.69
XRN1-208ENST00000470537 RAB3GAP1Q15042 981 aa10.77□□□□□ -0.69
XRN1-208ENST00000470537 C1orf53Q5VUE5 145 aa10.77□□□□□ -0.69
XRN1-208ENST00000470537 OLFML2BQ68BL8 750 aa10.77□□□□□ -0.69
XRN1-208ENST00000470537 TATDN1Q6P1N9 297 aa10.77□□□□□ -0.69
XRN1-208ENST00000470537 PI16Q6UXB8 463 aa10.77□□□□□ -0.69
XRN1-208ENST00000470537 ZNF512BQ96KM6 892 aaPredicted RBP10.77□□□□□ -0.69
XRN1-208ENST00000470537 EHD4Q9H223 541 aa10.77□□□□□ -0.69
XRN1-208ENST00000470537 PRDM5Q9NQX1 630 aaPredicted RBP10.77□□□□□ -0.69
XRN1-208ENST00000470537 TACC3Q9Y6A5 838 aa10.77□□□□□ -0.69
XRN1-208ENST00000470537 SEPT4O43236 478 aa10.76□□□□□ -0.69
XRN1-208ENST00000470537 CFHP08603 1231 aa10.76□□□□□ -0.69
XRN1-208ENST00000470537 FOSL2P15408 326 aa10.76□□□□□ -0.69
XRN1-208ENST00000470537 CYP2C19P33261 490 aa10.76□□□□□ -0.69
XRN1-208ENST00000470537 OS9Q13438 667 aaPredicted RBP10.76□□□□□ -0.69
XRN1-208ENST00000470537 SHHQ15465 462 aa10.76□□□□□ -0.69
XRN1-208ENST00000470537 ABCB5Q2M3G0 1257 aa10.76□□□□□ -0.69
XRN1-208ENST00000470537 MB21D1Q8N884 522 aa10.76□□□□□ -0.69
XRN1-208ENST00000470537 MROH8Q9H579 483 aa10.76□□□□□ -0.69
XRN1-208ENST00000470537 PRUNE2Q8WUY3 3088 aa10.76□□□□□ -0.69
XRN1-208ENST00000470537 VCANP13611 3396 aa10.75□□□□□ -0.69
XRN1-208ENST00000470537 RCCD1A6NED2 376 aa10.75□□□□□ -0.69
XRN1-208ENST00000470537 PEX10O60683 326 aa10.75□□□□□ -0.69
XRN1-208ENST00000470537 VCAM1P19320 739 aa10.75□□□□□ -0.69
XRN1-208ENST00000470537 CYP7A1P22680 504 aa10.75□□□□□ -0.69
XRN1-208ENST00000470537 ZYXQ15942 572 aaKnown RBP10.75□□□□□ -0.69
XRN1-208ENST00000470537 GJC2Q5T442 439 aaPredicted RBP10.75□□□□□ -0.69
XRN1-208ENST00000470537 CCDC174Q6PII3 467 aa10.75□□□□□ -0.69
XRN1-208ENST00000470537 TRIM67Q6ZTA4 783 aa10.75□□□□□ -0.69
XRN1-208ENST00000470537 ABRAQ8N0Z2 381 aa10.75□□□□□ -0.69
XRN1-208ENST00000470537 SHCBP1Q8NEM2 672 aa10.75□□□□□ -0.69
XRN1-208ENST00000470537 BADQ92934 168 aa10.75□□□□□ -0.69
XRN1-208ENST00000470537 DNAJC18Q9H819 358 aa10.75□□□□□ -0.69
XRN1-208ENST00000470537 SAP30BPQ9UHR5 308 aaKnown RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms