RNA–Protein interactions for RNA: ENST00000470458.1

RFTN1-208, Transcript of raftlin, lipid raft linker 1, human

TSL 4

Gene RFTN1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFTN1-208	ENST00000470458	CCDC129	Q6ZRS4	1044 aa		12.84	□□□□□ -0.35
RFTN1-208	ENST00000470458	GPR142	Q7Z601	462 aa		12.84	□□□□□ -0.35
RFTN1-208	ENST00000470458	STAG1	Q8WVM7	1258 aa		12.84	□□□□□ -0.35
RFTN1-208	ENST00000470458	CEP95	Q96GE4	821 aa		12.84	□□□□□ -0.35
RFTN1-208	ENST00000470458	GMCL1	Q96IK5	515 aa		12.84	□□□□□ -0.35
RFTN1-208	ENST00000470458	CCDC136	Q96JN2	1154 aa		12.84	□□□□□ -0.35
RFTN1-208	ENST00000470458	SPATC1L	Q9H0A9	340 aa		12.84	□□□□□ -0.35
RFTN1-208	ENST00000470458	GJD2	Q9UKL4	321 aa		12.84	□□□□□ -0.35
RFTN1-208	ENST00000470458	PPP1R9A	Q9ULJ8	1098 aa		12.84	□□□□□ -0.35
RFTN1-208	ENST00000470458	STX8	Q9UNK0	236 aa		12.84	□□□□□ -0.35
RFTN1-208	ENST00000470458		U3KPZ7	1027 aa	Predicted RBP	12.84	□□□□□ -0.35
RFTN1-208	ENST00000470458	PRDM1	O75626	825 aa		12.83	□□□□□ -0.36
RFTN1-208	ENST00000470458	TOP1	P11387	765 aa	Known RBP	12.83	□□□□□ -0.36
RFTN1-208	ENST00000470458	FCER1A	P12319	257 aa		12.83	□□□□□ -0.36
RFTN1-208	ENST00000470458	BMP3	P12645	472 aa		12.83	□□□□□ -0.36
RFTN1-208	ENST00000470458	PTPRE	P23469	700 aa		12.83	□□□□□ -0.36
RFTN1-208	ENST00000470458	SOX10	P56693	466 aa		12.83	□□□□□ -0.36
RFTN1-208	ENST00000470458	MAP2K5	Q13163	448 aa		12.83	□□□□□ -0.36
RFTN1-208	ENST00000470458	WDR78	Q5VTH9	848 aa		12.83	□□□□□ -0.36
RFTN1-208	ENST00000470458	MFSD14C	Q5VZR4	134 aa		12.83	□□□□□ -0.36
RFTN1-208	ENST00000470458	SLFN13	Q68D06	897 aa		12.83	□□□□□ -0.36
RFTN1-208	ENST00000470458	DPP9	Q86TI2	863 aa		12.83	□□□□□ -0.36
RFTN1-208	ENST00000470458	SPICE1	Q8N0Z3	855 aa		12.83	□□□□□ -0.36
RFTN1-208	ENST00000470458	STK11IP	Q8N1F8	1099 aa		12.83	□□□□□ -0.36
RFTN1-208	ENST00000470458	APBA2	Q99767	749 aa		12.83	□□□□□ -0.36
RFTN1-208	ENST00000470458	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	12.83	□□□□□ -0.36
RFTN1-208	ENST00000470458	RNF208	Q9H0X6	261 aa		12.83	□□□□□ -0.36
RFTN1-208	ENST00000470458	TXNRD2	Q9NNW7	524 aa		12.83	□□□□□ -0.36
RFTN1-208	ENST00000470458	HMX1	Q9NP08	348 aa	Predicted RBP	12.83	□□□□□ -0.36
RFTN1-208	ENST00000470458	FBXO40	Q9UH90	709 aa		12.83	□□□□□ -0.36
RFTN1-208	ENST00000470458	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	12.83	□□□□□ -0.36
RFTN1-208	ENST00000470458	RPTOR	Q8N122	1335 aa		12.83	□□□□□ -0.36
RFTN1-208	ENST00000470458	VWA5A	O00534	786 aa		12.82	□□□□□ -0.36
RFTN1-208	ENST00000470458	ATP2A1	O14983	1001 aa		12.82	□□□□□ -0.36
RFTN1-208	ENST00000470458	MSC	O60682	206 aa		12.82	□□□□□ -0.36
RFTN1-208	ENST00000470458	NDUFB10	O96000	172 aa		12.82	□□□□□ -0.36
RFTN1-208	ENST00000470458	HOXC6	P09630	235 aa		12.82	□□□□□ -0.36
RFTN1-208	ENST00000470458	ZKSCAN1	P17029	563 aa	Predicted RBP	12.82	□□□□□ -0.36
RFTN1-208	ENST00000470458	CTGF	P29279	349 aa		12.82	□□□□□ -0.36
RFTN1-208	ENST00000470458	STAT3	P40763	770 aa		12.82	□□□□□ -0.36
RFTN1-208	ENST00000470458	SLC1A4	P43007	532 aa		12.82	□□□□□ -0.36
RFTN1-208	ENST00000470458	STAT2	P52630	851 aa		12.82	□□□□□ -0.36
RFTN1-208	ENST00000470458	PLS1	Q14651	629 aa		12.82	□□□□□ -0.36
RFTN1-208	ENST00000470458	KCTD2	Q14681	263 aa		12.82	□□□□□ -0.36
RFTN1-208	ENST00000470458		Q3C1V9	767 aa		12.82	□□□□□ -0.36
RFTN1-208	ENST00000470458	VPS53	Q5VIR6	699 aa		12.82	□□□□□ -0.36
RFTN1-208	ENST00000470458	DGKH	Q86XP1	1220 aa		12.82	□□□□□ -0.36
RFTN1-208	ENST00000470458	SH3TC2	Q8TF17	1288 aa		12.82	□□□□□ -0.36
RFTN1-208	ENST00000470458	DCAF4	Q8WV16	495 aa		12.82	□□□□□ -0.36
RFTN1-208	ENST00000470458	TEX13B	Q9BXU2	312 aa		12.82	□□□□□ -0.36
RFTN1-208	ENST00000470458	GABRQ	Q9UN88	632 aa		12.82	□□□□□ -0.36
RFTN1-208	ENST00000470458	DIS3	Q9Y2L1	958 aa	Known RBP	12.82	□□□□□ -0.36
RFTN1-208	ENST00000470458	INHA	P05111	366 aa		12.81	□□□□□ -0.36
RFTN1-208	ENST00000470458	CCL5	P13501	91 aa		12.81	□□□□□ -0.36
RFTN1-208	ENST00000470458	GJA8	P48165	433 aa		12.81	□□□□□ -0.36
RFTN1-208	ENST00000470458	NOV	P48745	357 aa		12.81	□□□□□ -0.36
RFTN1-208	ENST00000470458	EVX2	Q03828	476 aa		12.81	□□□□□ -0.36
RFTN1-208	ENST00000470458	CTDSPL2	Q05D32	466 aa		12.81	□□□□□ -0.36
RFTN1-208	ENST00000470458	GRB14	Q14449	540 aa		12.81	□□□□□ -0.36
RFTN1-208	ENST00000470458	SART3	Q15020	963 aa	Known RBP	12.81	□□□□□ -0.36
RFTN1-208	ENST00000470458	TKFC	Q3LXA3	575 aa		12.81	□□□□□ -0.36
RFTN1-208	ENST00000470458	FAM47A	Q5JRC9	791 aa		12.81	□□□□□ -0.36
RFTN1-208	ENST00000470458	RRP12	Q5JTH9	1297 aa	Known RBP	12.81	□□□□□ -0.36
RFTN1-208	ENST00000470458	MORN1	Q5T089	497 aa		12.81	□□□□□ -0.36
RFTN1-208	ENST00000470458	FAM83B	Q5T0W9	1011 aa		12.81	□□□□□ -0.36
RFTN1-208	ENST00000470458	NCAPG2	Q86XI2	1143 aa		12.81	□□□□□ -0.36
RFTN1-208	ENST00000470458	RIOX2	Q8IUF8	465 aa		12.81	□□□□□ -0.36
RFTN1-208	ENST00000470458	MSL3	Q8N5Y2	521 aa	Known RBP	12.81	□□□□□ -0.36
RFTN1-208	ENST00000470458	ANKLE1	Q8NAG6	615 aa		12.81	□□□□□ -0.36
RFTN1-208	ENST00000470458	NRBP1	Q9UHY1	535 aa		12.81	□□□□□ -0.36
RFTN1-208	ENST00000470458	ZNFX1	Q9P2E3	1918 aa	Known RBP	12.8	□□□□□ -0.36
RFTN1-208	ENST00000470458	EIF5B	O60841	1220 aa	Known RBP	12.8	□□□□□ -0.36
RFTN1-208	ENST00000470458	SGPL1	O95470	568 aa		12.8	□□□□□ -0.36
RFTN1-208	ENST00000470458	CYP2B6	P20813	491 aa		12.8	□□□□□ -0.36
RFTN1-208	ENST00000470458	CHML	P26374	656 aa		12.8	□□□□□ -0.36
RFTN1-208	ENST00000470458	PDE4A	P27815	886 aa		12.8	□□□□□ -0.36
RFTN1-208	ENST00000470458	IK	Q13123	557 aa	Predicted RBP	12.8	□□□□□ -0.36
RFTN1-208	ENST00000470458	BMP2KL	Q5H9B9	411 aa		12.8	□□□□□ -0.36
RFTN1-208	ENST00000470458	ZNF589	Q86UQ0	364 aa	Predicted RBP	12.8	□□□□□ -0.36
RFTN1-208	ENST00000470458	CHST13	Q8NET6	341 aa		12.8	□□□□□ -0.36
RFTN1-208	ENST00000470458	USP6NL	Q92738	828 aa		12.8	□□□□□ -0.36
RFTN1-208	ENST00000470458	UBAC1	Q9BSL1	405 aa		12.8	□□□□□ -0.36
RFTN1-208	ENST00000470458	HTATIP2	Q9BUP3	242 aa		12.8	□□□□□ -0.36
RFTN1-208	ENST00000470458	MOV10L1	Q9BXT6	1211 aa	Known RBP	12.8	□□□□□ -0.36
RFTN1-208	ENST00000470458	MAF1	Q9H063	256 aa		12.8	□□□□□ -0.36
RFTN1-208	ENST00000470458	BTBD7	Q9P203	1132 aa		12.8	□□□□□ -0.36
RFTN1-208	ENST00000470458	ISY1	Q9ULR0	285 aa	Known RBP	12.8	□□□□□ -0.36
RFTN1-208	ENST00000470458	RLF	Q13129	1914 aa		12.8	□□□□□ -0.36
RFTN1-208	ENST00000470458	PARP14	Q460N5	1801 aa		12.79	□□□□□ -0.36
RFTN1-208	ENST00000470458	ERICH2	A1L162	156 aa		12.79	□□□□□ -0.36
RFTN1-208	ENST00000470458	CNMD	O75829	334 aa		12.79	□□□□□ -0.36
RFTN1-208	ENST00000470458	ECM2	O94769	699 aa	Predicted RBP	12.79	□□□□□ -0.36
RFTN1-208	ENST00000470458	TFRC	P02786	760 aa	Known RBP	12.79	□□□□□ -0.36
RFTN1-208	ENST00000470458	ERCC3	P19447	782 aa		12.79	□□□□□ -0.36
RFTN1-208	ENST00000470458	CAP1	Q01518	475 aa		12.79	□□□□□ -0.36
RFTN1-208	ENST00000470458	TRAF1	Q13077	416 aa		12.79	□□□□□ -0.36
RFTN1-208	ENST00000470458	GPATCH4	Q5T3I0	446 aa	Known RBP	12.79	□□□□□ -0.36
RFTN1-208	ENST00000470458	OLFML2B	Q68BL8	750 aa		12.79	□□□□□ -0.36
RFTN1-208	ENST00000470458	ATG4C	Q96DT6	458 aa		12.79	□□□□□ -0.36
RFTN1-208	ENST00000470458	PORCN	Q9H237	461 aa		12.79	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms