RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 USP6NLQ92738 828 aa16.75■□□□□ 0.27
TOP3B-215ENST00000470338 ATG4CQ96DT6 458 aa16.75■□□□□ 0.27
TOP3B-215ENST00000470338 FBXO28Q9NVF7 368 aa16.75■□□□□ 0.27
TOP3B-215ENST00000470338 ZNF213O14771 459 aa16.74■□□□□ 0.27
TOP3B-215ENST00000470338 RAD21O60216 631 aa16.74■□□□□ 0.27
TOP3B-215ENST00000470338 NMT2O60551 498 aa16.74■□□□□ 0.27
TOP3B-215ENST00000470338 ELNP15502 786 aa16.74■□□□□ 0.27
TOP3B-215ENST00000470338 MLLT1Q03111 559 aaPredicted RBP16.74■□□□□ 0.27
TOP3B-215ENST00000470338 MORN1Q5T089 497 aa16.74■□□□□ 0.27
TOP3B-215ENST00000470338 MFSD6Q6ZSS7 791 aa16.74■□□□□ 0.27
TOP3B-215ENST00000470338 RUFY2Q8WXA3 655 aa16.74■□□□□ 0.27
TOP3B-215ENST00000470338 SOCS4Q8WXH5 440 aa16.74■□□□□ 0.27
TOP3B-215ENST00000470338 NUDT12Q9BQG2 462 aa16.74■□□□□ 0.27
TOP3B-215ENST00000470338 TMEM106CQ9BVX2 250 aa16.74■□□□□ 0.27
TOP3B-215ENST00000470338 MOV10L1Q9BXT6 1211 aaKnown RBP16.74■□□□□ 0.27
TOP3B-215ENST00000470338 SPATC1LQ9H0A9 340 aa16.74■□□□□ 0.27
TOP3B-215ENST00000470338 TCP11L1Q9NUJ3 509 aa16.74■□□□□ 0.27
TOP3B-215ENST00000470338 PPP1R9AQ9ULJ8 1098 aa16.74■□□□□ 0.27
TOP3B-215ENST00000470338 XRCC5P13010 732 aaKnown RBP16.73■□□□□ 0.27
TOP3B-215ENST00000470338 UBXN2AP68543 259 aa16.73■□□□□ 0.27
TOP3B-215ENST00000470338 MTFR1Q15390 333 aa16.73■□□□□ 0.27
TOP3B-215ENST00000470338 TBC1D10CQ8IV04 446 aa16.73■□□□□ 0.27
TOP3B-215ENST00000470338 LRRC47Q8N1G4 583 aaKnown RBP16.73■□□□□ 0.27
TOP3B-215ENST00000470338 SHCBP1Q8NEM2 672 aa16.73■□□□□ 0.27
TOP3B-215ENST00000470338 NUP88Q99567 741 aaPredicted RBP16.73■□□□□ 0.27
TOP3B-215ENST00000470338 RNF41Q9H4P4 317 aaPredicted RBP16.73■□□□□ 0.27
TOP3B-215ENST00000470338 TOMM22Q9NS69 142 aa16.73■□□□□ 0.27
TOP3B-215ENST00000470338 BIN2Q9UBW5 565 aaPredicted RBP16.73■□□□□ 0.27
TOP3B-215ENST00000470338 CTNNA3Q9UI47 895 aa16.73■□□□□ 0.27
TOP3B-215ENST00000470338 SLC15A5A6NIM6 579 aa16.72■□□□□ 0.27
TOP3B-215ENST00000470338 VWA5AO00534 786 aa16.72■□□□□ 0.27
TOP3B-215ENST00000470338 PTPREP23469 700 aa16.72■□□□□ 0.27
TOP3B-215ENST00000470338 NT5C2P49902 561 aa16.72■□□□□ 0.27
TOP3B-215ENST00000470338 RRP12Q5JTH9 1297 aaKnown RBP16.72■□□□□ 0.27
TOP3B-215ENST00000470338 SLFN13Q68D06 897 aa16.72■□□□□ 0.27
TOP3B-215ENST00000470338 PRPF38AQ8NAV1 312 aaKnown RBP16.72■□□□□ 0.27
TOP3B-215ENST00000470338 STX8Q9UNK0 236 aa16.72■□□□□ 0.27
TOP3B-215ENST00000470338 ZNF236Q9UL36 1845 aa16.71■□□□□ 0.27
TOP3B-215ENST00000470338 SGSM2O43147 1006 aa16.71■□□□□ 0.27
TOP3B-215ENST00000470338 MYCP01106 439 aaPredicted RBP16.71■□□□□ 0.27
TOP3B-215ENST00000470338 INHAP05111 366 aa16.71■□□□□ 0.27
TOP3B-215ENST00000470338 CCL5P13501 91 aa16.71■□□□□ 0.27
TOP3B-215ENST00000470338 CYP2B6P20813 491 aa16.71■□□□□ 0.27
TOP3B-215ENST00000470338 TMEM132BQ14DG7 1078 aa16.71■□□□□ 0.27
TOP3B-215ENST00000470338 IMMTQ16891 758 aaKnown RBP16.71■□□□□ 0.27
TOP3B-215ENST00000470338 REPS2Q8NFH8 660 aa16.71■□□□□ 0.27
TOP3B-215ENST00000470338 NKX2-3Q8TAU0 364 aa16.71■□□□□ 0.27
TOP3B-215ENST00000470338 GMCL1Q96IK5 515 aa16.71■□□□□ 0.27
TOP3B-215ENST00000470338 CCDC136Q96JN2 1154 aa16.71■□□□□ 0.27
TOP3B-215ENST00000470338 SLF1Q9BQI6 1058 aa16.71■□□□□ 0.27
TOP3B-215ENST00000470338 FEM1BQ9UK73 627 aa16.71■□□□□ 0.27
TOP3B-215ENST00000470338 STRNO43815 780 aa16.7■□□□□ 0.26
TOP3B-215ENST00000470338 HMGCRP04035 888 aa16.7■□□□□ 0.26
TOP3B-215ENST00000470338 BMP3P12645 472 aa16.7■□□□□ 0.26
TOP3B-215ENST00000470338 ERCC3P19447 782 aa16.7■□□□□ 0.26
TOP3B-215ENST00000470338 EN2P19622 333 aaPredicted RBP16.7■□□□□ 0.26
TOP3B-215ENST00000470338 RGS2P41220 211 aa16.7■□□□□ 0.26
TOP3B-215ENST00000470338 MAP2K5Q13163 448 aa16.7■□□□□ 0.26
TOP3B-215ENST00000470338 GRB14Q14449 540 aa16.7■□□□□ 0.26
TOP3B-215ENST00000470338 PLS1Q14651 629 aa16.7■□□□□ 0.26
TOP3B-215ENST00000470338 SAMD1Q6SPF0 538 aaPredicted RBP16.7■□□□□ 0.26
TOP3B-215ENST00000470338 SKAP1Q86WV1 359 aa16.7■□□□□ 0.26
TOP3B-215ENST00000470338 TRMT44Q8IYL2 757 aaKnown RBP16.7■□□□□ 0.26
TOP3B-215ENST00000470338 ESR2Q92731 530 aa16.7■□□□□ 0.26
TOP3B-215ENST00000470338 TTC14Q96N46 770 aa16.7■□□□□ 0.26
TOP3B-215ENST00000470338 MROH8Q9H579 483 aa16.7■□□□□ 0.26
TOP3B-215ENST00000470338 CWC22Q9HCG8 908 aaKnown RBP16.7■□□□□ 0.26
TOP3B-215ENST00000470338 ZNF214Q9UL59 606 aaPredicted RBP16.7■□□□□ 0.26
TOP3B-215ENST00000470338 IVNS1ABPQ9Y6Y0 642 aa16.7■□□□□ 0.26
TOP3B-215ENST00000470338 MKI67P46013 3256 aaKnown RBP16.7■□□□□ 0.26
TOP3B-215ENST00000470338 NEDD4P46934 1319 aa16.7■□□□□ 0.26
TOP3B-215ENST00000470338 SLC25A27O95847 323 aa16.69■□□□□ 0.26
TOP3B-215ENST00000470338 NEFLP07196 543 aa16.69■□□□□ 0.26
TOP3B-215ENST00000470338 GJB1P08034 283 aa16.69■□□□□ 0.26
TOP3B-215ENST00000470338 HOXC6P09630 235 aa16.69■□□□□ 0.26
TOP3B-215ENST00000470338 PTH1RQ03431 593 aa16.69■□□□□ 0.26
TOP3B-215ENST00000470338 BMP2KLQ5H9B9 411 aa16.69■□□□□ 0.26
TOP3B-215ENST00000470338 WDR78Q5VTH9 848 aa16.69■□□□□ 0.26
TOP3B-215ENST00000470338 RCSD1Q6JBY9 416 aa16.69■□□□□ 0.26
TOP3B-215ENST00000470338 RIOX2Q8IUF8 465 aa16.69■□□□□ 0.26
TOP3B-215ENST00000470338 TRIB2Q92519 343 aa16.69■□□□□ 0.26
TOP3B-215ENST00000470338 TMEM47Q9BQJ4 181 aa16.69■□□□□ 0.26
TOP3B-215ENST00000470338 RNF208Q9H0X6 261 aa16.69■□□□□ 0.26
TOP3B-215ENST00000470338 UNC93B1Q9H1C4 597 aa16.69■□□□□ 0.26
TOP3B-215ENST00000470338 PLXNA1Q9UIW2 1896 aa16.68■□□□□ 0.26
TOP3B-215ENST00000470338 ATP2A1O14983 1001 aa16.68■□□□□ 0.26
TOP3B-215ENST00000470338 PLA2G6O60733 806 aa16.68■□□□□ 0.26
TOP3B-215ENST00000470338 TOP1P11387 765 aaKnown RBP16.68■□□□□ 0.26
TOP3B-215ENST00000470338 MCCP23508 829 aa16.68■□□□□ 0.26
TOP3B-215ENST00000470338 STAT3P40763 770 aa16.68■□□□□ 0.26
TOP3B-215ENST00000470338 SLC1A4P43007 532 aa16.68■□□□□ 0.26
TOP3B-215ENST00000470338 ABRAQ8N0Z2 381 aa16.68■□□□□ 0.26
TOP3B-215ENST00000470338 APBA2Q99767 749 aa16.68■□□□□ 0.26
TOP3B-215ENST00000470338 PDE4DIPQ5VU43 2346 aa16.68■□□□□ 0.26
TOP3B-215ENST00000470338 TMEM232C9JQI7 657 aa16.67■□□□□ 0.26
TOP3B-215ENST00000470338 ZBED4O75132 1171 aa16.67■□□□□ 0.26
TOP3B-215ENST00000470338 KDM4AO75164 1064 aa16.67■□□□□ 0.26
TOP3B-215ENST00000470338 FDX1P10109 184 aa16.67■□□□□ 0.26
TOP3B-215ENST00000470338 GJA8P48165 433 aa16.67■□□□□ 0.26
TOP3B-215ENST00000470338 TRIM32Q13049 653 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms