RNA–Protein interactions for RNA: ENST00000470056.5

GAPVD1-215, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 8,923 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-215ENST00000470056 EPS15P42566 896 aa7.9□□□□□ -1.15
GAPVD1-215ENST00000470056 ORC2Q13416 577 aaPredicted RBP7.9□□□□□ -1.15
GAPVD1-215ENST00000470056 DDX12PQ92771 950 aa7.9□□□□□ -1.15
GAPVD1-215ENST00000470056 VPS54Q9P1Q0 977 aa7.9□□□□□ -1.15
GAPVD1-215ENST00000470056 KIAA1468Q9P260 1216 aa7.9□□□□□ -1.15
GAPVD1-215ENST00000470056 CLIP2Q9UDT6 1046 aa7.9□□□□□ -1.15
GAPVD1-215ENST00000470056 NAPAP54920 295 aa7.9□□□□□ -1.15
GAPVD1-215ENST00000470056 OGFOD1Q8N543 542 aa7.9□□□□□ -1.15
GAPVD1-215ENST00000470056 SERPINB13Q9UIV8 391 aa7.9□□□□□ -1.15
GAPVD1-215ENST00000470056 MSL1Q68DK7 614 aa7.89□□□□□ -1.15
GAPVD1-215ENST00000470056 TRIML1Q8N9V2 468 aa7.89□□□□□ -1.15
GAPVD1-215ENST00000470056 NAA15Q9BXJ9 866 aaKnown RBP7.89□□□□□ -1.15
GAPVD1-215ENST00000470056 ARFGAP3Q9NP61 516 aa7.89□□□□□ -1.15
GAPVD1-215ENST00000470056 SH3BGRP55822 239 aaPredicted RBP7.89□□□□□ -1.15
GAPVD1-215ENST00000470056 CCDC93Q567U6 631 aa7.89□□□□□ -1.15
GAPVD1-215ENST00000470056 AMIGO3Q86WK7 504 aa7.89□□□□□ -1.15
GAPVD1-215ENST00000470056 BLIDQ8IZY5 108 aa7.89□□□□□ -1.15
GAPVD1-215ENST00000470056 PHF20Q9BVI0 1012 aa7.89□□□□□ -1.15
GAPVD1-215ENST00000470056 FAM217BQ9NTX9 383 aaPredicted RBP7.89□□□□□ -1.15
GAPVD1-215ENST00000470056 USP17L3A6NCW0 530 aa7.89□□□□□ -1.15
GAPVD1-215ENST00000470056 USP17L4A6NCW7 530 aa7.89□□□□□ -1.15
GAPVD1-215ENST00000470056 MPHOSPH10O00566 681 aaKnown RBP7.89□□□□□ -1.15
GAPVD1-215ENST00000470056 MCTP2Q6DN12 878 aa7.89□□□□□ -1.15
GAPVD1-215ENST00000470056 USP17L1Q7RTZ2 530 aa7.89□□□□□ -1.15
GAPVD1-215ENST00000470056 HEATR3Q7Z4Q2 680 aa7.89□□□□□ -1.15
GAPVD1-215ENST00000470056 FMR1NBQ8N0W7 255 aaPredicted RBP7.89□□□□□ -1.15
GAPVD1-215ENST00000470056 SPC24Q8NBT2 197 aa7.89□□□□□ -1.15
GAPVD1-215ENST00000470056 GPR101Q96P66 508 aaPredicted RBP7.89□□□□□ -1.15
GAPVD1-215ENST00000470056 SENP2Q9HC62 589 aa7.89□□□□□ -1.15
GAPVD1-215ENST00000470056 IRS2Q9Y4H2 1338 aa7.89□□□□□ -1.15
GAPVD1-215ENST00000470056 CT47A1Q5JQC4 288 aaPredicted RBP7.89□□□□□ -1.15
GAPVD1-215ENST00000470056 RESP18Q5W5W9 173 aa7.89□□□□□ -1.15
GAPVD1-215ENST00000470056 SPZ1Q9BXG8 430 aa7.89□□□□□ -1.15
GAPVD1-215ENST00000470056 RMND1Q9NWS8 449 aa7.89□□□□□ -1.15
GAPVD1-215ENST00000470056 PCDHA4Q9UN74 947 aa7.89□□□□□ -1.15
GAPVD1-215ENST00000470056 NLRP12P59046 1061 aa7.89□□□□□ -1.15
GAPVD1-215ENST00000470056 GPATCH4Q5T3I0 446 aaKnown RBP7.89□□□□□ -1.15
GAPVD1-215ENST00000470056 SPECC1LQ69YQ0 1117 aa7.89□□□□□ -1.15
GAPVD1-215ENST00000470056 CCDC91Q7Z6B0 441 aa7.89□□□□□ -1.15
GAPVD1-215ENST00000470056 PPP1R18Q6NYC8 613 aa7.89□□□□□ -1.15
GAPVD1-215ENST00000470056 CBX8Q9HC52 389 aa7.89□□□□□ -1.15
GAPVD1-215ENST00000470056 SRPRBQ9Y5M8 271 aaKnown RBP7.89□□□□□ -1.15
GAPVD1-215ENST00000470056 BPIFA3Q9BQP9 254 aa7.89□□□□□ -1.15
GAPVD1-215ENST00000470056 MTMR7Q9Y216 660 aa7.89□□□□□ -1.15
GAPVD1-215ENST00000470056 NDUFA8P51970 172 aa7.88□□□□□ -1.15
GAPVD1-215ENST00000470056 SMC1AQ14683 1233 aaKnown RBP7.88□□□□□ -1.15
GAPVD1-215ENST00000470056 ARL6IP4Q66PJ3 421 aaKnown RBP7.88□□□□□ -1.15
GAPVD1-215ENST00000470056 DYNLL2Q96FJ2 89 aa7.88□□□□□ -1.15
GAPVD1-215ENST00000470056 AIFM3Q96NN9 605 aa7.88□□□□□ -1.15
GAPVD1-215ENST00000470056 PPIP5K2O43314 1243 aa7.88□□□□□ -1.15
GAPVD1-215ENST00000470056 TTLL1O95922 423 aa7.88□□□□□ -1.15
GAPVD1-215ENST00000470056 PTPREP23469 700 aa7.88□□□□□ -1.15
GAPVD1-215ENST00000470056 CCDC96Q2M329 555 aa7.88□□□□□ -1.15
GAPVD1-215ENST00000470056 TMEM266Q2M3C6 531 aa7.88□□□□□ -1.15
GAPVD1-215ENST00000470056 NBPF11Q86T75 865 aa7.88□□□□□ -1.15
GAPVD1-215ENST00000470056 IQUBQ8NA54 791 aa7.88□□□□□ -1.15
GAPVD1-215ENST00000470056 ENGASEQ8NFI3 743 aa7.88□□□□□ -1.15
GAPVD1-215ENST00000470056 FUCA2Q9BTY2 467 aa7.88□□□□□ -1.15
GAPVD1-215ENST00000470056 FTOQ9C0B1 505 aaKnown RBP eCLIP7.88□□□□□ -1.15
GAPVD1-215ENST00000470056 EHD4Q9H223 541 aa7.88□□□□□ -1.15
GAPVD1-215ENST00000470056 MYH7P12883 1935 aa7.88□□□□□ -1.15
GAPVD1-215ENST00000470056 NOLC1Q14978 699 aaKnown RBP eCLIP7.88□□□□□ -1.15
GAPVD1-215ENST00000470056 KRBA2Q6ZNG9 492 aa7.88□□□□□ -1.15
GAPVD1-215ENST00000470056 FOXP4Q8IVH2 680 aaPredicted RBP7.88□□□□□ -1.15
GAPVD1-215ENST00000470056 TMEM47Q9BQJ4 181 aa7.88□□□□□ -1.15
GAPVD1-215ENST00000470056 VPS33BQ9H267 617 aa7.88□□□□□ -1.15
GAPVD1-215ENST00000470056 KLRF2D3W0D1 207 aa7.88□□□□□ -1.15
GAPVD1-215ENST00000470056 PLEKHA8P1O95397 391 aa7.88□□□□□ -1.15
GAPVD1-215ENST00000470056 ILDR1Q86SU0 546 aaPredicted RBP7.88□□□□□ -1.15
GAPVD1-215ENST00000470056 AKAP11Q9UKA4 1901 aa7.88□□□□□ -1.15
GAPVD1-215ENST00000470056 CNTNAP5Q8WYK1 1306 aa7.88□□□□□ -1.15
GAPVD1-215ENST00000470056 RASA1P20936 1047 aa7.88□□□□□ -1.15
GAPVD1-215ENST00000470056 SSR1P43307 286 aaKnown RBP7.88□□□□□ -1.15
GAPVD1-215ENST00000470056 DOK7Q18PE1 504 aa7.88□□□□□ -1.15
GAPVD1-215ENST00000470056 SLC4A8Q2Y0W8 1093 aa7.88□□□□□ -1.15
GAPVD1-215ENST00000470056 MAST2Q6P0Q8 1798 aa7.88□□□□□ -1.15
GAPVD1-215ENST00000470056 ECE2O60344 883 aa7.88□□□□□ -1.15
GAPVD1-215ENST00000470056 NONOQ15233 471 aaKnown RBP eCLIP7.88□□□□□ -1.15
GAPVD1-215ENST00000470056 TTLL6Q8N841 843 aa7.88□□□□□ -1.15
GAPVD1-215ENST00000470056 CKAP4Q07065 602 aaKnown RBP7.88□□□□□ -1.15
GAPVD1-215ENST00000470056 PROM2Q8N271 834 aa7.88□□□□□ -1.15
GAPVD1-215ENST00000470056 RASSF4Q9H2L5 321 aa7.88□□□□□ -1.15
GAPVD1-215ENST00000470056 SERPINA10Q9UK55 444 aa7.88□□□□□ -1.15
GAPVD1-215ENST00000470056 DOCK2Q92608 1830 aa7.88□□□□□ -1.15
GAPVD1-215ENST00000470056 CDC25BP30305 580 aa7.87□□□□□ -1.15
GAPVD1-215ENST00000470056 MMP14P50281 582 aa7.87□□□□□ -1.15
GAPVD1-215ENST00000470056 CBX1P83916 185 aa7.87□□□□□ -1.15
GAPVD1-215ENST00000470056 PIK3AP1Q6ZUJ8 805 aa7.87□□□□□ -1.15
GAPVD1-215ENST00000470056 DAGLBQ8NCG7 672 aa7.87□□□□□ -1.15
GAPVD1-215ENST00000470056 ZNF384Q8TF68 577 aa7.87□□□□□ -1.15
GAPVD1-215ENST00000470056 MRFAP1L1Q96HT8 127 aa7.87□□□□□ -1.15
GAPVD1-215ENST00000470056 LRRC27Q9C0I9 530 aa7.87□□□□□ -1.15
GAPVD1-215ENST00000470056 SH2D4AQ9H788 454 aa7.87□□□□□ -1.15
GAPVD1-215ENST00000470056 CRKP46108 304 aa7.87□□□□□ -1.15
GAPVD1-215ENST00000470056 GOLPH3LQ9H4A5 285 aa7.87□□□□□ -1.15
GAPVD1-215ENST00000470056 MKRN1Q9UHC7 482 aaKnown RBP7.87□□□□□ -1.15
GAPVD1-215ENST00000470056 NPM3O75607 178 aaKnown RBP7.87□□□□□ -1.15
GAPVD1-215ENST00000470056 LONP1P36776 959 aaKnown RBP7.87□□□□□ -1.15
GAPVD1-215ENST00000470056 ATP2B2Q01814 1243 aa7.87□□□□□ -1.15
GAPVD1-215ENST00000470056 MLKLQ8NB16 471 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms