RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 ZNF589Q86UQ0 364 aaPredicted RBP16.74■□□□□ 0.27
COMMD3-208ENST00000470045 CCAR1Q8IX12 1150 aaKnown RBP16.74■□□□□ 0.27
COMMD3-208ENST00000470045 ZNF444Q8N0Y2 327 aaPredicted RBP16.74■□□□□ 0.27
COMMD3-208ENST00000470045 SHCBP1Q8NEM2 672 aa16.74■□□□□ 0.27
COMMD3-208ENST00000470045 NEDD1Q8NHV4 660 aa16.74■□□□□ 0.27
COMMD3-208ENST00000470045 U2AF1L4Q8WU68 220 aaKnown RBP16.74■□□□□ 0.27
COMMD3-208ENST00000470045 MKL1Q969V6 931 aa16.74■□□□□ 0.27
COMMD3-208ENST00000470045 ATG4CQ96DT6 458 aa16.74■□□□□ 0.27
COMMD3-208ENST00000470045 APBA2Q99767 749 aa16.74■□□□□ 0.27
COMMD3-208ENST00000470045 MOV10L1Q9BXT6 1211 aaKnown RBP16.74■□□□□ 0.27
COMMD3-208ENST00000470045 MTMR4Q9NYA4 1195 aa16.74■□□□□ 0.27
COMMD3-208ENST00000470045 FRMPD3Q5JV73 1810 aa16.74■□□□□ 0.27
COMMD3-208ENST00000470045 SLC15A5A6NIM6 579 aa16.73■□□□□ 0.27
COMMD3-208ENST00000470045 SGPL1O95470 568 aa16.73■□□□□ 0.27
COMMD3-208ENST00000470045 CYP2B6P20813 491 aa16.73■□□□□ 0.27
COMMD3-208ENST00000470045 PTPREP23469 700 aa16.73■□□□□ 0.27
COMMD3-208ENST00000470045 MAP2K5Q13163 448 aa16.73■□□□□ 0.27
COMMD3-208ENST00000470045 GRB14Q14449 540 aa16.73■□□□□ 0.27
COMMD3-208ENST00000470045 TRMT44Q8IYL2 757 aaKnown RBP16.73■□□□□ 0.27
COMMD3-208ENST00000470045 RILPL2Q969X0 211 aa16.73■□□□□ 0.27
COMMD3-208ENST00000470045 CEP95Q96GE4 821 aa16.73■□□□□ 0.27
COMMD3-208ENST00000470045 SPATC1LQ9H0A9 340 aa16.73■□□□□ 0.27
COMMD3-208ENST00000470045 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.73■□□□□ 0.27
COMMD3-208ENST00000470045 CCDC171Q6TFL3 1326 aa16.72■□□□□ 0.27
COMMD3-208ENST00000470045 HOXC6P09630 235 aa16.72■□□□□ 0.27
COMMD3-208ENST00000470045 FGRP09769 529 aa16.72■□□□□ 0.27
COMMD3-208ENST00000470045 SDSP20132 328 aa16.72■□□□□ 0.27
COMMD3-208ENST00000470045 IRX6P78412 446 aaPredicted RBP16.72■□□□□ 0.27
COMMD3-208ENST00000470045 TRIM32Q13049 653 aa16.72■□□□□ 0.27
COMMD3-208ENST00000470045 FAM83BQ5T0W9 1011 aa16.72■□□□□ 0.27
COMMD3-208ENST00000470045 CRISPLD2Q9H0B8 497 aa16.72■□□□□ 0.27
COMMD3-208ENST00000470045 FBXO28Q9NVF7 368 aa16.72■□□□□ 0.27
COMMD3-208ENST00000470045 PPP1R9AQ9ULJ8 1098 aa16.72■□□□□ 0.27
COMMD3-208ENST00000470045 TACC3Q9Y6A5 838 aa16.72■□□□□ 0.27
COMMD3-208ENST00000470045 ZNFX1Q9P2E3 1918 aaKnown RBP16.72■□□□□ 0.27
COMMD3-208ENST00000470045 RPTORQ8N122 1335 aa16.71■□□□□ 0.27
COMMD3-208ENST00000470045 F5H6K3 240 aa16.71■□□□□ 0.27
COMMD3-208ENST00000470045 PITPNM1O00562 1244 aa16.71■□□□□ 0.27
COMMD3-208ENST00000470045 ORC4O43929 436 aa16.71■□□□□ 0.27
COMMD3-208ENST00000470045 TTLL1O95922 423 aa16.71■□□□□ 0.27
COMMD3-208ENST00000470045 NDUFB10O96000 172 aa16.71■□□□□ 0.27
COMMD3-208ENST00000470045 IGHA2P01877 340 aa16.71■□□□□ 0.27
COMMD3-208ENST00000470045 TSPY3P0CV98 308 aa16.71■□□□□ 0.27
COMMD3-208ENST00000470045 TSPY8P0CW00 308 aa16.71■□□□□ 0.27
COMMD3-208ENST00000470045 HSPD1P10809 573 aaKnown RBP16.71■□□□□ 0.27
COMMD3-208ENST00000470045 ZKSCAN1P17029 563 aaPredicted RBP16.71■□□□□ 0.27
COMMD3-208ENST00000470045 PDE4AP27815 886 aa16.71■□□□□ 0.27
COMMD3-208ENST00000470045 CTDSPL2Q05D32 466 aa16.71■□□□□ 0.27
COMMD3-208ENST00000470045 KLRC3Q07444 240 aa16.71■□□□□ 0.27
COMMD3-208ENST00000470045 CCL14Q16627 93 aa16.71■□□□□ 0.27
COMMD3-208ENST00000470045 GMCL1P1Q8NEA9 526 aa16.71■□□□□ 0.27
COMMD3-208ENST00000470045 REPS2Q8NFH8 660 aa16.71■□□□□ 0.27
COMMD3-208ENST00000470045 DEFB118Q96PH6 123 aa16.71■□□□□ 0.27
COMMD3-208ENST00000470045 CLIP2Q9UDT6 1046 aa16.71■□□□□ 0.27
COMMD3-208ENST00000470045 IVNS1ABPQ9Y6Y0 642 aa16.71■□□□□ 0.27
COMMD3-208ENST00000470045 PLXNA1Q9UIW2 1896 aa16.7■□□□□ 0.26
COMMD3-208ENST00000470045 VWA5AO00534 786 aa16.7■□□□□ 0.26
COMMD3-208ENST00000470045 FGAP02671 866 aa16.7■□□□□ 0.26
COMMD3-208ENST00000470045 ERCC3P19447 782 aa16.7■□□□□ 0.26
COMMD3-208ENST00000470045 TFAP4Q01664 338 aa16.7■□□□□ 0.26
COMMD3-208ENST00000470045 TMEM132BQ14DG7 1078 aa16.7■□□□□ 0.26
COMMD3-208ENST00000470045 FAM47AQ5JRC9 791 aa16.7■□□□□ 0.26
COMMD3-208ENST00000470045 NUP88Q99567 741 aaPredicted RBP16.7■□□□□ 0.26
COMMD3-208ENST00000470045 CWC22Q9HCG8 908 aaKnown RBP16.7■□□□□ 0.26
COMMD3-208ENST00000470045 HMX1Q9NP08 348 aaPredicted RBP16.7■□□□□ 0.26
COMMD3-208ENST00000470045 ZNF214Q9UL59 606 aaPredicted RBP16.7■□□□□ 0.26
COMMD3-208ENST00000470045 STRNO43815 780 aa16.69■□□□□ 0.26
COMMD3-208ENST00000470045 PRKAR2AP13861 404 aaKnown RBP16.69■□□□□ 0.26
COMMD3-208ENST00000470045 NOVP48745 357 aa16.69■□□□□ 0.26
COMMD3-208ENST00000470045 WDR78Q5VTH9 848 aa16.69■□□□□ 0.26
COMMD3-208ENST00000470045 ABRAQ8N0Z2 381 aa16.69■□□□□ 0.26
COMMD3-208ENST00000470045 MROH8Q9H579 483 aa16.69■□□□□ 0.26
COMMD3-208ENST00000470045 ALPK3Q96L96 1907 aa16.68■□□□□ 0.26
COMMD3-208ENST00000470045 HIP1O00291 1037 aa16.68■□□□□ 0.26
COMMD3-208ENST00000470045 RAD21O60216 631 aa16.68■□□□□ 0.26
COMMD3-208ENST00000470045 FARP2O94887 1054 aaPredicted RBP16.68■□□□□ 0.26
COMMD3-208ENST00000470045 SLC25A27O95847 323 aa16.68■□□□□ 0.26
COMMD3-208ENST00000470045 MFAP1P55081 439 aaKnown RBP16.68■□□□□ 0.26
COMMD3-208ENST00000470045 CACNB2Q08289 660 aaPredicted RBP16.68■□□□□ 0.26
COMMD3-208ENST00000470045 PPP4R3BQ5MIZ7 849 aa16.68■□□□□ 0.26
COMMD3-208ENST00000470045 RIOX2Q8IUF8 465 aa16.68■□□□□ 0.26
COMMD3-208ENST00000470045 LRRC47Q8N1G4 583 aaKnown RBP16.68■□□□□ 0.26
COMMD3-208ENST00000470045 NPLOC4Q8TAT6 608 aa16.68■□□□□ 0.26
COMMD3-208ENST00000470045 SLF1Q9BQI6 1058 aa16.68■□□□□ 0.26
COMMD3-208ENST00000470045 NBPF3Q9H094 633 aa16.68■□□□□ 0.26
COMMD3-208ENST00000470045 INCENPQ9NQS7 918 aa16.68■□□□□ 0.26
COMMD3-208ENST00000470045 IL17RBQ9NRM6 502 aa16.68■□□□□ 0.26
COMMD3-208ENST00000470045 FLRT1Q9NZU1 646 aa16.68■□□□□ 0.26
COMMD3-208ENST00000470045 TSPY2A6NKD2 308 aa16.67■□□□□ 0.26
COMMD3-208ENST00000470045 GSPT1P15170 499 aaKnown RBP16.67■□□□□ 0.26
COMMD3-208ENST00000470045 ADORA2AP29274 412 aa16.67■□□□□ 0.26
COMMD3-208ENST00000470045 PLS1Q14651 629 aa16.67■□□□□ 0.26
COMMD3-208ENST00000470045 TTC22Q5TAA0 569 aa16.67■□□□□ 0.26
COMMD3-208ENST00000470045 DIAPH3Q9NSV4 1193 aa16.67■□□□□ 0.26
COMMD3-208ENST00000470045 ATP2A1O14983 1001 aa16.66■□□□□ 0.26
COMMD3-208ENST00000470045 PCP11498 1178 aaKnown RBP16.66■□□□□ 0.26
COMMD3-208ENST00000470045 COPB2P35606 906 aa16.66■□□□□ 0.26
COMMD3-208ENST00000470045 OLFML2BQ68BL8 750 aa16.66■□□□□ 0.26
COMMD3-208ENST00000470045 CWC27Q6UX04 472 aaKnown RBP16.66■□□□□ 0.26
COMMD3-208ENST00000470045 NCAPG2Q86XI2 1143 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms