RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 CELF1Q92879 486 aaKnown RBP15.46■□□□□ 0.07
BRCA1-209ENST00000470026 CRNKL1Q9BZJ0 848 aaKnown RBP15.46■□□□□ 0.07
BRCA1-209ENST00000470026 SH3GLB2Q9NR46 395 aa15.46■□□□□ 0.07
BRCA1-209ENST00000470026 NMT2O60551 498 aa15.46■□□□□ 0.06
BRCA1-209ENST00000470026 TBC1D8O95759 1140 aa15.46■□□□□ 0.06
BRCA1-209ENST00000470026 LONP1P36776 959 aaKnown RBP15.46■□□□□ 0.06
BRCA1-209ENST00000470026 FXR1P51114 621 aaKnown RBP eCLIP15.46■□□□□ 0.06
BRCA1-209ENST00000470026 ZNF658Q5TYW1 1059 aaPredicted RBP15.46■□□□□ 0.06
BRCA1-209ENST00000470026 PIK3AP1Q6ZUJ8 805 aa15.46■□□□□ 0.06
BRCA1-209ENST00000470026 CTNND2Q9UQB3 1225 aa15.46■□□□□ 0.06
BRCA1-209ENST00000470026 COL24A1Q17RW2 1714 aa15.45■□□□□ 0.06
BRCA1-209ENST00000470026 M0R2N6 131 aa15.45■□□□□ 0.06
BRCA1-209ENST00000470026 ADAMTS3O15072 1205 aa15.45■□□□□ 0.06
BRCA1-209ENST00000470026 CALML3P27482 149 aa15.45■□□□□ 0.06
BRCA1-209ENST00000470026 CASP14P31944 242 aa15.45■□□□□ 0.06
BRCA1-209ENST00000470026 NLRP5P59047 1200 aa15.45■□□□□ 0.06
BRCA1-209ENST00000470026 CCDC12Q8WUD4 166 aaPredicted RBP15.45■□□□□ 0.06
BRCA1-209ENST00000470026 GOLGA1Q92805 767 aa15.45■□□□□ 0.06
BRCA1-209ENST00000470026 IRX2Q9BZI1 471 aaPredicted RBP15.45■□□□□ 0.06
BRCA1-209ENST00000470026 CCDC88AQ3V6T2 1871 aa15.45■□□□□ 0.06
BRCA1-209ENST00000470026 VEGFAP15692 232 aaPredicted RBP15.44■□□□□ 0.06
BRCA1-209ENST00000470026 KLRK1P26718 216 aa15.44■□□□□ 0.06
BRCA1-209ENST00000470026 PAK1Q13153 545 aa15.44■□□□□ 0.06
BRCA1-209ENST00000470026 TRIM14Q14142 442 aa15.44■□□□□ 0.06
BRCA1-209ENST00000470026 JAKMIP3Q5VZ66 844 aa15.44■□□□□ 0.06
BRCA1-209ENST00000470026 TMTC1Q8IUR5 882 aa15.44■□□□□ 0.06
BRCA1-209ENST00000470026 RMND1Q9NWS8 449 aa15.44■□□□□ 0.06
BRCA1-209ENST00000470026 TTF2Q9UNY4 1162 aaKnown RBP15.44■□□□□ 0.06
BRCA1-209ENST00000470026 IRS2Q9Y4H2 1338 aa15.44■□□□□ 0.06
BRCA1-209ENST00000470026 COPB1P53618 953 aaKnown RBP15.44■□□□□ 0.06
BRCA1-209ENST00000470026 SEMA3FQ13275 785 aa15.44■□□□□ 0.06
BRCA1-209ENST00000470026 FAM47AQ5JRC9 791 aa15.44■□□□□ 0.06
BRCA1-209ENST00000470026 RRAGBQ5VZM2 374 aa15.44■□□□□ 0.06
BRCA1-209ENST00000470026 SRGAP1Q7Z6B7 1085 aa15.44■□□□□ 0.06
BRCA1-209ENST00000470026 PARD6BQ9BYG5 372 aa15.44■□□□□ 0.06
BRCA1-209ENST00000470026 BLZF1Q9H2G9 400 aa15.44■□□□□ 0.06
BRCA1-209ENST00000470026 MKRN1Q9UHC7 482 aaKnown RBP15.44■□□□□ 0.06
BRCA1-209ENST00000470026 CDC23Q9UJX2 597 aa15.44■□□□□ 0.06
BRCA1-209ENST00000470026 KIF5CO60282 957 aa15.43■□□□□ 0.06
BRCA1-209ENST00000470026 SASH3O75995 380 aa15.43■□□□□ 0.06
BRCA1-209ENST00000470026 SEC31AO94979 1220 aaKnown RBP15.43■□□□□ 0.06
BRCA1-209ENST00000470026 KIF5BP33176 963 aa15.43■□□□□ 0.06
BRCA1-209ENST00000470026 TXLNAP40222 546 aa15.43■□□□□ 0.06
BRCA1-209ENST00000470026 TCP11X2Q5H9J9 407 aa15.43■□□□□ 0.06
BRCA1-209ENST00000470026 TEX35Q5T0J7 233 aa15.43■□□□□ 0.06
BRCA1-209ENST00000470026 BARGINQ6ZT62 677 aa15.43■□□□□ 0.06
BRCA1-209ENST00000470026 DGKHQ86XP1 1220 aa15.43■□□□□ 0.06
BRCA1-209ENST00000470026 BLIDQ8IZY5 108 aa15.43■□□□□ 0.06
BRCA1-209ENST00000470026 STAMQ92783 540 aa15.43■□□□□ 0.06
BRCA1-209ENST00000470026 EPC1Q9H2F5 836 aa15.43■□□□□ 0.06
BRCA1-209ENST00000470026 SPATA31A5Q5VU36 1347 aa15.43■□□□□ 0.06
BRCA1-209ENST00000470026 SPATA31A7Q8IWB4 1347 aa15.43■□□□□ 0.06
BRCA1-209ENST00000470026 A0A0U1RQJ8 604 aa15.43■□□□□ 0.06
BRCA1-209ENST00000470026 RPN1P04843 607 aaKnown RBP15.43■□□□□ 0.06
BRCA1-209ENST00000470026 CYP2D6P10635 497 aa15.43■□□□□ 0.06
BRCA1-209ENST00000470026 HIBADHP31937 336 aaKnown RBP15.43■□□□□ 0.06
BRCA1-209ENST00000470026 MCM7P33993 719 aa15.43■□□□□ 0.06
BRCA1-209ENST00000470026 RPS8P62241 208 aaKnown RBP15.43■□□□□ 0.06
BRCA1-209ENST00000470026 ERVK-24P63145 666 aa15.43■□□□□ 0.06
BRCA1-209ENST00000470026 TAF3Q5VWG9 929 aa15.43■□□□□ 0.06
BRCA1-209ENST00000470026 AEBP2Q6ZN18 517 aaPredicted RBP15.43■□□□□ 0.06
BRCA1-209ENST00000470026 DAGLBQ8NCG7 672 aa15.43■□□□□ 0.06
BRCA1-209ENST00000470026 LINC00116Q8NCU8 138 aa15.43■□□□□ 0.06
BRCA1-209ENST00000470026 CPLX3Q8WVH0 158 aa15.43■□□□□ 0.06
BRCA1-209ENST00000470026 ATRIPQ8WXE1 791 aa15.43■□□□□ 0.06
BRCA1-209ENST00000470026 ANKRD2Q9GZV1 360 aa15.43■□□□□ 0.06
BRCA1-209ENST00000470026 LZTFL1Q9NQ48 299 aa15.43■□□□□ 0.06
BRCA1-209ENST00000470026 ABHD10Q9NUJ1 306 aa15.43■□□□□ 0.06
BRCA1-209ENST00000470026 MYO1AQ9UBC5 1043 aa15.43■□□□□ 0.06
BRCA1-209ENST00000470026 ROBO3Q96MS0 1386 aa15.42■□□□□ 0.06
BRCA1-209ENST00000470026 FAM205AQ6ZU69 1335 aa15.42■□□□□ 0.06
BRCA1-209ENST00000470026 CNTNAP4Q9C0A0 1308 aa15.42■□□□□ 0.06
BRCA1-209ENST00000470026 CCDC151A5D8V7 595 aa15.42■□□□□ 0.06
BRCA1-209ENST00000470026 PRDX5P30044 214 aa15.42■□□□□ 0.06
BRCA1-209ENST00000470026 TUBB4BP68371 445 aa15.42■□□□□ 0.06
BRCA1-209ENST00000470026 BRD3Q15059 726 aa15.42■□□□□ 0.06
BRCA1-209ENST00000470026 NELFBQ8WX92 580 aa15.42■□□□□ 0.06
BRCA1-209ENST00000470026 PCDHA4Q9UN74 947 aa15.42■□□□□ 0.06
BRCA1-209ENST00000470026 MYH8P13535 1937 aa15.42■□□□□ 0.06
BRCA1-209ENST00000470026 KCNJ18B7U540 433 aa15.41■□□□□ 0.06
BRCA1-209ENST00000470026 H7C1D1 291 aa15.41■□□□□ 0.06
BRCA1-209ENST00000470026 RNF225M0QZC1 329 aaPredicted RBP15.41■□□□□ 0.06
BRCA1-209ENST00000470026 N4BP3O15049 544 aa15.41■□□□□ 0.06
BRCA1-209ENST00000470026 CYP2C19P33261 490 aa15.41■□□□□ 0.06
BRCA1-209ENST00000470026 ARHGAP25P42331 645 aa15.41■□□□□ 0.06
BRCA1-209ENST00000470026 KCNJ12Q14500 433 aa15.41■□□□□ 0.06
BRCA1-209ENST00000470026 KCNB1Q14721 858 aa15.41■□□□□ 0.06
BRCA1-209ENST00000470026 NAALADL2Q58DX5 795 aa15.41■□□□□ 0.06
BRCA1-209ENST00000470026 IRF2BP1Q8IU81 584 aa15.41■□□□□ 0.06
BRCA1-209ENST00000470026 ADSSL1Q8N142 457 aa15.41■□□□□ 0.06
BRCA1-209ENST00000470026 CEP112Q8N8E3 955 aa15.41■□□□□ 0.06
BRCA1-209ENST00000470026 HNRNPLLQ8WVV9 542 aaKnown RBP15.41■□□□□ 0.06
BRCA1-209ENST00000470026 FUT8Q9BYC5 575 aa15.41■□□□□ 0.06
BRCA1-209ENST00000470026 ARFGAP3Q9NP61 516 aa15.41■□□□□ 0.06
BRCA1-209ENST00000470026 RAB21Q9UL25 225 aa15.41■□□□□ 0.06
BRCA1-209ENST00000470026 BAZ2BQ9UIF8 2168 aaKnown RBP15.41■□□□□ 0.06
BRCA1-209ENST00000470026 TSPY2A6NKD2 308 aa15.41■□□□□ 0.06
BRCA1-209ENST00000470026 MYL1P05976 194 aa15.41■□□□□ 0.06
BRCA1-209ENST00000470026 CCT6AP40227 531 aaKnown RBP15.41■□□□□ 0.06
BRCA1-209ENST00000470026 CHMP4BP1P59074 171 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms