RNA–Protein interactions for RNA: ENST00000469713.1

VPS8-220, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 668 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-220ENST00000469713 C22orf34Q6ZV56 151 aa6.17□□□□□ -1.42
VPS8-220ENST00000469713 MFSD4AQ8N468 514 aa6.17□□□□□ -1.42
VPS8-220ENST00000469713 COX4I2Q96KJ9 171 aa6.17□□□□□ -1.42
VPS8-220ENST00000469713 APBA2Q99767 749 aa6.17□□□□□ -1.42
VPS8-220ENST00000469713 GBP3Q9H0R5 595 aa6.17□□□□□ -1.42
VPS8-220ENST00000469713 LRRC4CQ9HCJ2 640 aa6.17□□□□□ -1.42
VPS8-220ENST00000469713 GP6Q9HCN6 339 aa6.17□□□□□ -1.42
VPS8-220ENST00000469713 TMA7Q9Y2S6 64 aaKnown RBP6.17□□□□□ -1.42
VPS8-220ENST00000469713 CAPN6Q9Y6Q1 641 aa6.17□□□□□ -1.42
VPS8-220ENST00000469713 GNAT3A8MTJ3 354 aa6.16□□□□□ -1.42
VPS8-220ENST00000469713 GSC2O15499 205 aa6.16□□□□□ -1.42
VPS8-220ENST00000469713 NAT2P11245 290 aa6.16□□□□□ -1.42
VPS8-220ENST00000469713 ITIH2P19823 946 aa6.16□□□□□ -1.42
VPS8-220ENST00000469713 OXCT1P55809 520 aa6.16□□□□□ -1.42
VPS8-220ENST00000469713 TNK2Q07912 1038 aa6.16□□□□□ -1.42
VPS8-220ENST00000469713 SSRP1Q08945 709 aaKnown RBP6.16□□□□□ -1.42
VPS8-220ENST00000469713 TCEAL1Q15170 157 aa6.16□□□□□ -1.42
VPS8-220ENST00000469713 TMC3Q7Z5M5 1100 aa6.16□□□□□ -1.42
VPS8-220ENST00000469713 ADAT2Q7Z6V5 191 aaKnown RBP6.16□□□□□ -1.42
VPS8-220ENST00000469713 NLGN1Q8N2Q7 840 aa6.16□□□□□ -1.42
VPS8-220ENST00000469713 ZNF513Q8N8E2 541 aaPredicted RBP6.16□□□□□ -1.42
VPS8-220ENST00000469713 ADCY4Q8NFM4 1077 aa6.16□□□□□ -1.42
VPS8-220ENST00000469713 RNPC3Q96LT9 517 aaKnown RBP6.16□□□□□ -1.42
VPS8-220ENST00000469713 METTL22Q9BUU2 404 aaPredicted RBP6.16□□□□□ -1.42
VPS8-220ENST00000469713 LGR4Q9BXB1 951 aa6.16□□□□□ -1.42
VPS8-220ENST00000469713 EPN3Q9H201 632 aa6.16□□□□□ -1.42
VPS8-220ENST00000469713 KANSL2Q9H9L4 492 aa6.16□□□□□ -1.42
VPS8-220ENST00000469713 GFOD1Q9NXC2 390 aa6.16□□□□□ -1.42
VPS8-220ENST00000469713 KCNH3Q9ULD8 1083 aa6.16□□□□□ -1.42
VPS8-220ENST00000469713 KDM2BQ8NHM5 1336 aa6.16□□□□□ -1.42
VPS8-220ENST00000469713 KRTAP9-6A0A140TA67 174 aa6.15□□□□□ -1.42
VPS8-220ENST00000469713 SHISA3A0PJX4 238 aa6.15□□□□□ -1.42
VPS8-220ENST00000469713 ITGA4P13612 1032 aa6.15□□□□□ -1.42
VPS8-220ENST00000469713 ZNF445P59923 1031 aa6.15□□□□□ -1.42
VPS8-220ENST00000469713 ARHGAP27Q6ZUM4 889 aa6.15□□□□□ -1.42
VPS8-220ENST00000469713 ZDHHC13Q8IUH4 622 aa6.15□□□□□ -1.42
VPS8-220ENST00000469713 SH3TC2Q8TF17 1288 aa6.15□□□□□ -1.42
VPS8-220ENST00000469713 BRF1Q92994 677 aa6.15□□□□□ -1.42
VPS8-220ENST00000469713 PPP1R14AQ96A00 147 aa6.15□□□□□ -1.42
VPS8-220ENST00000469713 ZNF669Q96BR6 464 aaPredicted RBP6.15□□□□□ -1.42
VPS8-220ENST00000469713 WHRNQ9P202 907 aa6.15□□□□□ -1.42
VPS8-220ENST00000469713 MINPP1Q9UNW1 487 aa6.15□□□□□ -1.42
VPS8-220ENST00000469713 SUGT1Q9Y2Z0 365 aa6.15□□□□□ -1.42
VPS8-220ENST00000469713 FAM155AB1AL88 458 aaPredicted RBP6.14□□□□□ -1.43
VPS8-220ENST00000469713 PPM1BO75688 479 aa6.14□□□□□ -1.43
VPS8-220ENST00000469713 PRAMEF1O95521 474 aa6.14□□□□□ -1.43
VPS8-220ENST00000469713 NMIQ13287 307 aaPredicted RBP6.14□□□□□ -1.43
VPS8-220ENST00000469713 NKPD1Q17RQ9 610 aa6.14□□□□□ -1.43
VPS8-220ENST00000469713 NOL9Q5SY16 702 aaKnown RBP6.14□□□□□ -1.43
VPS8-220ENST00000469713 SDE2Q6IQ49 451 aa6.14□□□□□ -1.43
VPS8-220ENST00000469713 LRRN4CLQ8ND94 238 aa6.14□□□□□ -1.43
VPS8-220ENST00000469713 SPATA9Q9BWV2 254 aa6.14□□□□□ -1.43
VPS8-220ENST00000469713 LRP2BPQ9P2M1 347 aa6.14□□□□□ -1.43
VPS8-220ENST00000469713 LEMD3Q9Y2U8 911 aa6.14□□□□□ -1.43
VPS8-220ENST00000469713 FHOD1Q9Y613 1164 aa6.14□□□□□ -1.43
VPS8-220ENST00000469713 A0A1W2PQU0 124 aa6.13□□□□□ -1.43
VPS8-220ENST00000469713 PRR19A6NJB7 356 aa6.13□□□□□ -1.43
VPS8-220ENST00000469713 AGRPO00253 132 aa6.13□□□□□ -1.43
VPS8-220ENST00000469713 MEIS1O00470 390 aa6.13□□□□□ -1.43
VPS8-220ENST00000469713 CYP26A1O43174 497 aa6.13□□□□□ -1.43
VPS8-220ENST00000469713 SIGLEC6O43699 453 aa6.13□□□□□ -1.43
VPS8-220ENST00000469713 CEACAM5P06731 702 aa6.13□□□□□ -1.43
VPS8-220ENST00000469713 ITGAVP06756 1048 aa6.13□□□□□ -1.43
VPS8-220ENST00000469713 PPP2R5DQ14738 602 aa6.13□□□□□ -1.43
VPS8-220ENST00000469713 C2orf27AQ580R0 203 aa6.13□□□□□ -1.43
VPS8-220ENST00000469713 CDKAL1Q5VV42 579 aa6.13□□□□□ -1.43
VPS8-220ENST00000469713 ZNF227Q86WZ6 799 aa6.13□□□□□ -1.43
VPS8-220ENST00000469713 SPACA3Q8IXA5 215 aa6.13□□□□□ -1.43
VPS8-220ENST00000469713 PLD6Q8N2A8 252 aaKnown RBP6.13□□□□□ -1.43
VPS8-220ENST00000469713 FIBCD1Q8N539 461 aa6.13□□□□□ -1.43
VPS8-220ENST00000469713 PIWIL2Q8TC59 973 aaKnown RBP6.13□□□□□ -1.43
VPS8-220ENST00000469713 ASCC2Q9H1I8 757 aaPredicted RBP6.13□□□□□ -1.43
VPS8-220ENST00000469713 NOL6Q9H6R4 1146 aaKnown RBP6.13□□□□□ -1.43
VPS8-220ENST00000469713 CHST7Q9NS84 486 aa6.13□□□□□ -1.43
VPS8-220ENST00000469713 CGGBP1Q9UFW8 167 aaPredicted RBP6.13□□□□□ -1.43
VPS8-220ENST00000469713 PLAGL2Q9UPG8 496 aa6.13□□□□□ -1.43
VPS8-220ENST00000469713 AKT3Q9Y243 479 aa6.13□□□□□ -1.43
VPS8-220ENST00000469713 ST14Q9Y5Y6 855 aa6.13□□□□□ -1.43
VPS8-220ENST00000469713 IQCA1LA6NCM1 817 aa6.12□□□□□ -1.43
VPS8-220ENST00000469713 WASH4PA8MWX3 477 aa6.12□□□□□ -1.43
VPS8-220ENST00000469713 TBX1O43435 398 aa6.12□□□□□ -1.43
VPS8-220ENST00000469713 ADCY3O60266 1144 aa6.12□□□□□ -1.43
VPS8-220ENST00000469713 FAM153BP0C7A2 387 aa6.12□□□□□ -1.43
VPS8-220ENST00000469713 SQSTM1Q13501 440 aa6.12□□□□□ -1.43
VPS8-220ENST00000469713 CPSF6Q16630 551 aaKnown RBP eCLIP6.12□□□□□ -1.43
VPS8-220ENST00000469713 FAM177A1Q8N128 213 aaPredicted RBP6.12□□□□□ -1.43
VPS8-220ENST00000469713 LRRC47Q8N1G4 583 aaKnown RBP6.12□□□□□ -1.43
VPS8-220ENST00000469713 ARHGEF39Q8N4T4 335 aa6.12□□□□□ -1.43
VPS8-220ENST00000469713 JMYQ8N9B5 988 aa6.12□□□□□ -1.43
VPS8-220ENST00000469713 BVESQ8NE79 360 aa6.12□□□□□ -1.43
VPS8-220ENST00000469713 SYTL5Q8TDW5 730 aaPredicted RBP6.12□□□□□ -1.43
VPS8-220ENST00000469713 THAP3Q8WTV1 239 aaPredicted RBP6.12□□□□□ -1.43
VPS8-220ENST00000469713 SGSM3Q96HU1 749 aa6.12□□□□□ -1.43
VPS8-220ENST00000469713 DSCC1Q9BVC3 393 aa6.12□□□□□ -1.43
VPS8-220ENST00000469713 GPR62Q9BZJ7 368 aa6.12□□□□□ -1.43
VPS8-220ENST00000469713 DUSP15Q9H1R2 295 aaPredicted RBP6.12□□□□□ -1.43
VPS8-220ENST00000469713 MKNK2Q9HBH9 465 aa6.12□□□□□ -1.43
VPS8-220ENST00000469713 PRR13Q9NZ81 148 aa6.12□□□□□ -1.43
VPS8-220ENST00000469713 PIM2Q9P1W9 311 aa6.12□□□□□ -1.43
VPS8-220ENST00000469713 CADPSQ9ULU8 1353 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms