RNA–Protein interactions for RNA: ENST00000469694.5

GPC1-208, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 2,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-208ENST00000469694 CHD4Q14839 1912 aa15.76■□□□□ 0.11
GPC1-208ENST00000469694 IL1R1P14778 569 aa15.75■□□□□ 0.11
GPC1-208ENST00000469694 SEC23AQ15436 765 aa15.75■□□□□ 0.11
GPC1-208ENST00000469694 SYNE3Q6ZMZ3 975 aa15.75■□□□□ 0.11
GPC1-208ENST00000469694 ZNF654Q8IZM8 581 aa15.75■□□□□ 0.11
GPC1-208ENST00000469694 MKRN1Q9UHC7 482 aaKnown RBP15.75■□□□□ 0.11
GPC1-208ENST00000469694 CLIC4Q9Y696 253 aa15.75■□□□□ 0.11
GPC1-208ENST00000469694 CBFA2T2O43439 604 aa15.75■□□□□ 0.11
GPC1-208ENST00000469694 ATP2B1P20020 1258 aa15.75■□□□□ 0.11
GPC1-208ENST00000469694 CHRNA5P30532 468 aa15.75■□□□□ 0.11
GPC1-208ENST00000469694 GOLGA8FQ08AF8 430 aa15.75■□□□□ 0.11
GPC1-208ENST00000469694 GOLGA8DPQ0D2H9 430 aa15.75■□□□□ 0.11
GPC1-208ENST00000469694 C15orf52Q6ZUT6 534 aaKnown RBP15.75■□□□□ 0.11
GPC1-208ENST00000469694 HDXQ7Z353 690 aa15.75■□□□□ 0.11
GPC1-208ENST00000469694 VSTM4Q8IW00 320 aa15.75■□□□□ 0.11
GPC1-208ENST00000469694 SP8Q8IXZ3 490 aa15.75■□□□□ 0.11
GPC1-208ENST00000469694 SLC44A5Q8NCS7 719 aa15.75■□□□□ 0.11
GPC1-208ENST00000469694 ZSCAN10Q96SZ4 725 aaPredicted RBP15.75■□□□□ 0.11
GPC1-208ENST00000469694 ANKRD31Q8N7Z5 1873 aa15.75■□□□□ 0.11
GPC1-208ENST00000469694 SRCAPQ6ZRS2 3230 aa15.75■□□□□ 0.11
GPC1-208ENST00000469694 CORO7P57737 925 aa15.74■□□□□ 0.11
GPC1-208ENST00000469694 MCM6Q14566 821 aa15.74■□□□□ 0.11
GPC1-208ENST00000469694 ISM2Q6H9L7 571 aa15.74■□□□□ 0.11
GPC1-208ENST00000469694 PPM1EQ8WY54 764 aa15.74■□□□□ 0.11
GPC1-208ENST00000469694 SECISBP2LQ93073 1101 aaKnown RBP15.74■□□□□ 0.11
GPC1-208ENST00000469694 DHX58Q96C10 678 aa15.74■□□□□ 0.11
GPC1-208ENST00000469694 ATP8A2Q9NTI2 1148 aa15.74■□□□□ 0.11
GPC1-208ENST00000469694 NPR1P16066 1061 aa15.74■□□□□ 0.11
GPC1-208ENST00000469694 BTDP43251 543 aa15.74■□□□□ 0.11
GPC1-208ENST00000469694 RTN1Q16799 776 aa15.74■□□□□ 0.11
GPC1-208ENST00000469694 DRC1Q96MC2 740 aa15.74■□□□□ 0.11
GPC1-208ENST00000469694 RTFDC1Q9BY42 306 aaPredicted RBP15.74■□□□□ 0.11
GPC1-208ENST00000469694 KCNQ5Q9NR82 932 aa15.74■□□□□ 0.11
GPC1-208ENST00000469694 SERPINC1P01008 464 aa15.73■□□□□ 0.11
GPC1-208ENST00000469694 TOP1P11387 765 aaKnown RBP15.73■□□□□ 0.11
GPC1-208ENST00000469694 PLCD1P51178 756 aa15.73■□□□□ 0.11
GPC1-208ENST00000469694 KRT40Q6A162 431 aa15.73■□□□□ 0.11
GPC1-208ENST00000469694 LINC00301Q8NCQ3 95 aa15.73■□□□□ 0.11
GPC1-208ENST00000469694 MYH2Q9UKX2 1941 aa15.73■□□□□ 0.11
GPC1-208ENST00000469694 CFAP100Q494V2 611 aa15.73■□□□□ 0.11
GPC1-208ENST00000469694 CPLX2Q6PUV4 134 aaKnown RBP15.73■□□□□ 0.11
GPC1-208ENST00000469694 DPP8Q6V1X1 898 aaPredicted RBP15.73■□□□□ 0.11
GPC1-208ENST00000469694 FANCBQ8NB91 859 aa15.73■□□□□ 0.11
GPC1-208ENST00000469694 ZNF202O95125 648 aa15.73■□□□□ 0.11
GPC1-208ENST00000469694 KIF23Q02241 960 aaPredicted RBP15.73■□□□□ 0.11
GPC1-208ENST00000469694 SF3A1Q15459 793 aaKnown RBP15.73■□□□□ 0.11
GPC1-208ENST00000469694 IFIT1BQ5T764 474 aaKnown RBP15.73■□□□□ 0.11
GPC1-208ENST00000469694 DEFB132Q7Z7B7 95 aa15.73■□□□□ 0.11
GPC1-208ENST00000469694 RAB21Q9UL25 225 aa15.73■□□□□ 0.11
GPC1-208ENST00000469694 KCNJ14Q9UNX9 436 aa15.73■□□□□ 0.11
GPC1-208ENST00000469694 FAN1Q9Y2M0 1017 aa15.73■□□□□ 0.11
GPC1-208ENST00000469694 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.73■□□□□ 0.11
GPC1-208ENST00000469694 MROH7-TTC4A0A0A0MT08 1334 aa15.73■□□□□ 0.11
GPC1-208ENST00000469694 N4BP1O75113 896 aaKnown RBP15.72■□□□□ 0.11
GPC1-208ENST00000469694 CDKL5O76039 1030 aa15.72■□□□□ 0.11
GPC1-208ENST00000469694 ZC3H12CQ9C0D7 883 aaKnown RBP15.72■□□□□ 0.11
GPC1-208ENST00000469694 ANKZF1Q9H8Y5 726 aa15.72■□□□□ 0.11
GPC1-208ENST00000469694 L1RE1Q9UN81 338 aa15.72■□□□□ 0.11
GPC1-208ENST00000469694 DUOX1Q9NRD9 1551 aa15.72■□□□□ 0.11
GPC1-208ENST00000469694 EIF3JO75822 258 aaKnown RBP15.72■□□□□ 0.11
GPC1-208ENST00000469694 PDE6BP35913 854 aa15.72■□□□□ 0.11
GPC1-208ENST00000469694 SSRP1Q08945 709 aaKnown RBP15.72■□□□□ 0.11
GPC1-208ENST00000469694 SLC15A2Q16348 729 aa15.72■□□□□ 0.11
GPC1-208ENST00000469694 IQCA1Q86XH1 822 aa15.72■□□□□ 0.11
GPC1-208ENST00000469694 C2CD5Q86YS7 1000 aa15.72■□□□□ 0.11
GPC1-208ENST00000469694 CERS5Q8N5B7 392 aa15.72■□□□□ 0.11
GPC1-208ENST00000469694 FLAD1Q8NFF5 587 aa15.72■□□□□ 0.11
GPC1-208ENST00000469694 BAG1Q99933 345 aaPredicted RBP15.72■□□□□ 0.11
GPC1-208ENST00000469694 DEF6Q9H4E7 631 aa15.72■□□□□ 0.11
GPC1-208ENST00000469694 ARPP21Q9UBL0 812 aaPredicted RBP15.72■□□□□ 0.11
GPC1-208ENST00000469694 TSPY2A6NKD2 308 aa15.71■□□□□ 0.11
GPC1-208ENST00000469694 TMEM232C9JQI7 657 aa15.71■□□□□ 0.11
GPC1-208ENST00000469694 PLEKHA8P1O95397 391 aa15.71■□□□□ 0.11
GPC1-208ENST00000469694 BAG3O95817 575 aa15.71■□□□□ 0.11
GPC1-208ENST00000469694 FGRP09769 529 aa15.71■□□□□ 0.11
GPC1-208ENST00000469694 PSEN1P49768 467 aa15.71■□□□□ 0.11
GPC1-208ENST00000469694 CHMP4BP1P59074 171 aa15.71■□□□□ 0.11
GPC1-208ENST00000469694 STK38Q15208 465 aa15.71■□□□□ 0.11
GPC1-208ENST00000469694 LRRC31Q6UY01 552 aa15.71■□□□□ 0.11
GPC1-208ENST00000469694 SUGP1Q8IWZ8 645 aaKnown RBP15.71■□□□□ 0.11
GPC1-208ENST00000469694 DBNDD1Q9H9R9 158 aa15.71■□□□□ 0.11
GPC1-208ENST00000469694 STX10O60499 249 aa15.71■□□□□ 0.11
GPC1-208ENST00000469694 MARCKSP29966 332 aaPredicted RBP15.71■□□□□ 0.11
GPC1-208ENST00000469694 C12orf60Q5U649 245 aa15.71■□□□□ 0.11
GPC1-208ENST00000469694 SRGAP1Q7Z6B7 1085 aa15.71■□□□□ 0.11
GPC1-208ENST00000469694 KCNG4Q8TDN1 519 aa15.71■□□□□ 0.11
GPC1-208ENST00000469694 MASTLQ96GX5 879 aa15.71■□□□□ 0.11
GPC1-208ENST00000469694 CAMKK2Q96RR4 588 aa15.71■□□□□ 0.11
GPC1-208ENST00000469694 MTMR7Q9Y216 660 aa15.71■□□□□ 0.11
GPC1-208ENST00000469694 CPP00450 1065 aa15.7■□□□□ 0.1
GPC1-208ENST00000469694 IFNAR1P17181 557 aa15.7■□□□□ 0.1
GPC1-208ENST00000469694 SCNN1DP51172 638 aa15.7■□□□□ 0.1
GPC1-208ENST00000469694 GSTO1P78417 241 aa15.7■□□□□ 0.1
GPC1-208ENST00000469694 MYL5Q02045 173 aa15.7■□□□□ 0.1
GPC1-208ENST00000469694 MYSM1Q5VVJ2 828 aa15.7■□□□□ 0.1
GPC1-208ENST00000469694 TOGARAM2Q6ZUX3 1019 aa15.7■□□□□ 0.1
GPC1-208ENST00000469694 POTEB2H3BUK9 544 aa15.7■□□□□ 0.1
GPC1-208ENST00000469694 CUTAO60888 179 aa15.7■□□□□ 0.1
GPC1-208ENST00000469694 FMNL1O95466 1100 aaPredicted RBP15.7■□□□□ 0.1
GPC1-208ENST00000469694 ALDH1B1P30837 517 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms