RNA–Protein interactions for RNA: ENST00000469147.5

TRAPPC12-215, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 1,002 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-215ENST00000469147 ZYXQ15942 572 aaKnown RBP11.32□□□□□ -0.6
TRAPPC12-215ENST00000469147 DGKHQ86XP1 1220 aa11.32□□□□□ -0.6
TRAPPC12-215ENST00000469147 GMCL1P1Q8NEA9 526 aa11.32□□□□□ -0.6
TRAPPC12-215ENST00000469147 GTF3C2Q8WUA4 911 aaPredicted RBP11.32□□□□□ -0.6
TRAPPC12-215ENST00000469147 MTA3Q9BTC8 594 aa11.32□□□□□ -0.6
TRAPPC12-215ENST00000469147 IL17RBQ9NRM6 502 aa11.32□□□□□ -0.6
TRAPPC12-215ENST00000469147 CLIP2Q9UDT6 1046 aa11.32□□□□□ -0.6
TRAPPC12-215ENST00000469147 GABRQQ9UN88 632 aa11.32□□□□□ -0.6
TRAPPC12-215ENST00000469147 STX8Q9UNK0 236 aa11.32□□□□□ -0.6
TRAPPC12-215ENST00000469147 NR2E3Q9Y5X4 410 aa11.32□□□□□ -0.6
TRAPPC12-215ENST00000469147 MYH4Q9Y623 1939 aa11.32□□□□□ -0.6
TRAPPC12-215ENST00000469147 USP17L15C9J2P7 530 aa11.31□□□□□ -0.6
TRAPPC12-215ENST00000469147 USP17L13C9JLJ4 530 aa11.31□□□□□ -0.6
TRAPPC12-215ENST00000469147 USP17L11C9JVI0 530 aa11.31□□□□□ -0.6
TRAPPC12-215ENST00000469147 USP17L18D6R9N7 530 aa11.31□□□□□ -0.6
TRAPPC12-215ENST00000469147 USP17L22D6RA61 530 aa11.31□□□□□ -0.6
TRAPPC12-215ENST00000469147 USP17L17D6RBQ6 530 aa11.31□□□□□ -0.6
TRAPPC12-215ENST00000469147 USP17L19D6RCP7 530 aa11.31□□□□□ -0.6
TRAPPC12-215ENST00000469147 USP17L20D6RJB6 530 aa11.31□□□□□ -0.6
TRAPPC12-215ENST00000469147 TNPO2O14787 897 aaKnown RBP11.31□□□□□ -0.6
TRAPPC12-215ENST00000469147 CCL5P13501 91 aa11.31□□□□□ -0.6
TRAPPC12-215ENST00000469147 MCCP23508 829 aa11.31□□□□□ -0.6
TRAPPC12-215ENST00000469147 IRX3P78415 501 aaPredicted RBP11.31□□□□□ -0.6
TRAPPC12-215ENST00000469147 USP17L24Q0WX57 530 aa11.31□□□□□ -0.6
TRAPPC12-215ENST00000469147 SART3Q15020 963 aaKnown RBP11.31□□□□□ -0.6
TRAPPC12-215ENST00000469147 KCNB2Q92953 911 aa11.31□□□□□ -0.6
TRAPPC12-215ENST00000469147 COA7Q96BR5 231 aa11.31□□□□□ -0.6
TRAPPC12-215ENST00000469147 UBAC1Q9BSL1 405 aa11.31□□□□□ -0.6
TRAPPC12-215ENST00000469147 ZSWIM5Q9P217 1185 aa11.31□□□□□ -0.6
TRAPPC12-215ENST00000469147 COLQQ9Y215 455 aaPredicted RBP11.31□□□□□ -0.6
TRAPPC12-215ENST00000469147 PLXNB2O15031 1838 aa11.3□□□□□ -0.6
TRAPPC12-215ENST00000469147 F5H6K3 240 aa11.3□□□□□ -0.6
TRAPPC12-215ENST00000469147 H0YGN5 161 aa11.3□□□□□ -0.6
TRAPPC12-215ENST00000469147 NMT2O60551 498 aa11.3□□□□□ -0.6
TRAPPC12-215ENST00000469147 TOP1P11387 765 aaKnown RBP11.3□□□□□ -0.6
TRAPPC12-215ENST00000469147 GCLCP48506 637 aaPredicted RBP11.3□□□□□ -0.6
TRAPPC12-215ENST00000469147 KLRC3Q07444 240 aa11.3□□□□□ -0.6
TRAPPC12-215ENST00000469147 MTFR1Q15390 333 aa11.3□□□□□ -0.6
TRAPPC12-215ENST00000469147 Q3C1V9 767 aa11.3□□□□□ -0.6
TRAPPC12-215ENST00000469147 CATSPERGQ6ZRH7 1159 aa11.3□□□□□ -0.6
TRAPPC12-215ENST00000469147 STOX1Q6ZVD7 989 aa11.3□□□□□ -0.6
TRAPPC12-215ENST00000469147 CCAR1Q8IX12 1150 aaKnown RBP11.3□□□□□ -0.6
TRAPPC12-215ENST00000469147 MB21D2Q8IYB1 491 aaPredicted RBP11.3□□□□□ -0.6
TRAPPC12-215ENST00000469147 SLAIN1Q8ND83 568 aa11.3□□□□□ -0.6
TRAPPC12-215ENST00000469147 ANKS1AQ92625 1134 aa11.3□□□□□ -0.6
TRAPPC12-215ENST00000469147 GMCL1Q96IK5 515 aa11.3□□□□□ -0.6
TRAPPC12-215ENST00000469147 ZSCAN10Q96SZ4 725 aaPredicted RBP11.3□□□□□ -0.6
TRAPPC12-215ENST00000469147 P2RX7Q99572 595 aaKnown RBP11.3□□□□□ -0.6
TRAPPC12-215ENST00000469147 ASCC2Q9H1I8 757 aaPredicted RBP11.3□□□□□ -0.6
TRAPPC12-215ENST00000469147 RPAP3Q9H6T3 665 aaPredicted RBP11.3□□□□□ -0.6
TRAPPC12-215ENST00000469147 CWC22Q9HCG8 908 aaKnown RBP11.3□□□□□ -0.6
TRAPPC12-215ENST00000469147 TXNRD2Q9NNW7 524 aa11.3□□□□□ -0.6
TRAPPC12-215ENST00000469147 RLFQ13129 1914 aa11.29□□□□□ -0.6
TRAPPC12-215ENST00000469147 ERICH2A1L162 156 aa11.29□□□□□ -0.6
TRAPPC12-215ENST00000469147 ADCY3O60266 1144 aa11.29□□□□□ -0.6
TRAPPC12-215ENST00000469147 NDUFB10O96000 172 aa11.29□□□□□ -0.6
TRAPPC12-215ENST00000469147 HMGB1P09429 215 aaKnown RBP11.29□□□□□ -0.6
TRAPPC12-215ENST00000469147 MCM5P33992 734 aa11.29□□□□□ -0.6
TRAPPC12-215ENST00000469147 PRKCZQ05513 592 aa11.29□□□□□ -0.6
TRAPPC12-215ENST00000469147 RCSD1Q6JBY9 416 aa11.29□□□□□ -0.6
TRAPPC12-215ENST00000469147 CHRDL2Q6WN34 429 aa11.29□□□□□ -0.6
TRAPPC12-215ENST00000469147 LBX2Q6XYB7 198 aa11.29□□□□□ -0.6
TRAPPC12-215ENST00000469147 LRRC47Q8N1G4 583 aaKnown RBP11.29□□□□□ -0.6
TRAPPC12-215ENST00000469147 TMEM87BQ96K49 555 aa11.29□□□□□ -0.6
TRAPPC12-215ENST00000469147 USP26Q9BXU7 913 aa11.29□□□□□ -0.6
TRAPPC12-215ENST00000469147 TAF6LQ9Y6J9 622 aa11.29□□□□□ -0.6
TRAPPC12-215ENST00000469147 TNKSO95271 1327 aa11.29□□□□□ -0.6
TRAPPC12-215ENST00000469147 WDR19Q8NEZ3 1342 aa11.29□□□□□ -0.6
TRAPPC12-215ENST00000469147 CNMDO75829 334 aa11.28□□□□□ -0.6
TRAPPC12-215ENST00000469147 GJB1P08034 283 aa11.28□□□□□ -0.6
TRAPPC12-215ENST00000469147 HERVK_113P62684 666 aa11.28□□□□□ -0.6
TRAPPC12-215ENST00000469147 COG2Q14746 738 aa11.28□□□□□ -0.6
TRAPPC12-215ENST00000469147 FAM110CQ1W6H9 321 aa11.28□□□□□ -0.6
TRAPPC12-215ENST00000469147 C8orf34Q49A92 452 aa11.28□□□□□ -0.6
TRAPPC12-215ENST00000469147 SLFN13Q68D06 897 aa11.28□□□□□ -0.6
TRAPPC12-215ENST00000469147 CYB5R4Q7L1T6 521 aa11.28□□□□□ -0.6
TRAPPC12-215ENST00000469147 SPICE1Q8N0Z3 855 aa11.28□□□□□ -0.6
TRAPPC12-215ENST00000469147 ANKRD13CQ8N6S4 541 aa11.28□□□□□ -0.6
TRAPPC12-215ENST00000469147 ENAHQ8N8S7 591 aaPredicted RBP11.28□□□□□ -0.6
TRAPPC12-215ENST00000469147 DCAF4Q8WV16 495 aa11.28□□□□□ -0.6
TRAPPC12-215ENST00000469147 NEK1Q96PY6 1258 aa11.28□□□□□ -0.6
TRAPPC12-215ENST00000469147 TMEM47Q9BQJ4 181 aa11.28□□□□□ -0.6
TRAPPC12-215ENST00000469147 TANGO6Q9C0B7 1094 aa11.28□□□□□ -0.6
TRAPPC12-215ENST00000469147 HOXC10Q9NYD6 342 aa11.28□□□□□ -0.6
TRAPPC12-215ENST00000469147 IFIT3O14879 490 aaKnown RBP11.27□□□□□ -0.61
TRAPPC12-215ENST00000469147 RAD21O60216 631 aa11.27□□□□□ -0.61
TRAPPC12-215ENST00000469147 EVI5O60447 810 aa11.27□□□□□ -0.61
TRAPPC12-215ENST00000469147 PLA2G6O60733 806 aa11.27□□□□□ -0.61
TRAPPC12-215ENST00000469147 FARP2O94887 1054 aaPredicted RBP11.27□□□□□ -0.61
TRAPPC12-215ENST00000469147 BMP3P12645 472 aa11.27□□□□□ -0.61
TRAPPC12-215ENST00000469147 KCNA4P22459 653 aa11.27□□□□□ -0.61
TRAPPC12-215ENST00000469147 PSMA5P28066 241 aa11.27□□□□□ -0.61
TRAPPC12-215ENST00000469147 SLC1A4P43007 532 aa11.27□□□□□ -0.61
TRAPPC12-215ENST00000469147 GJA8P48165 433 aa11.27□□□□□ -0.61
TRAPPC12-215ENST00000469147 FLT3LGP49771 235 aa11.27□□□□□ -0.61
TRAPPC12-215ENST00000469147 SEC23AQ15436 765 aa11.27□□□□□ -0.61
TRAPPC12-215ENST00000469147 FAM83BQ5T0W9 1011 aa11.27□□□□□ -0.61
TRAPPC12-215ENST00000469147 IFIT1BQ5T764 474 aaKnown RBP11.27□□□□□ -0.61
TRAPPC12-215ENST00000469147 RASEFQ8IZ41 740 aa11.27□□□□□ -0.61
TRAPPC12-215ENST00000469147 TMTC2Q8N394 836 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms