RNA–Protein interactions for RNA: ENST00000469087.1

RUNX1-213, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 1,790 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-213ENST00000469087 SLC1A4P43007 532 aa14.88□□□□□ -0.03
RUNX1-213ENST00000469087 FMR1Q06787 632 aaKnown RBP eCLIP14.88□□□□□ -0.03
RUNX1-213ENST00000469087 ASPRV1Q53RT3 343 aa14.88□□□□□ -0.03
RUNX1-213ENST00000469087 OTUD7BQ6GQQ9 843 aa14.88□□□□□ -0.03
RUNX1-213ENST00000469087 TTBK2Q6IQ55 1244 aa14.88□□□□□ -0.03
RUNX1-213ENST00000469087 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.88□□□□□ -0.03
RUNX1-213ENST00000469087 KCTD1Q719H9 257 aa14.88□□□□□ -0.03
RUNX1-213ENST00000469087 LZTS2Q9BRK4 669 aa14.88□□□□□ -0.03
RUNX1-213ENST00000469087 WDR33Q9C0J8 1336 aaKnown RBP14.88□□□□□ -0.03
RUNX1-213ENST00000469087 TRAF5O00463 557 aa14.88□□□□□ -0.03
RUNX1-213ENST00000469087 SMARCA1P28370 1054 aa14.88□□□□□ -0.03
RUNX1-213ENST00000469087 MAP3K9P80192 1104 aa14.88□□□□□ -0.03
RUNX1-213ENST00000469087 GUCY1B3Q02153 619 aa14.88□□□□□ -0.03
RUNX1-213ENST00000469087 MOB2Q70IA6 237 aa14.88□□□□□ -0.03
RUNX1-213ENST00000469087 SPICE1Q8N0Z3 855 aa14.88□□□□□ -0.03
RUNX1-213ENST00000469087 FBXO18Q8NFZ0 1043 aa14.88□□□□□ -0.03
RUNX1-213ENST00000469087 DCAF4Q8WV16 495 aa14.88□□□□□ -0.03
RUNX1-213ENST00000469087 PIBF1Q8WXW3 757 aa14.88□□□□□ -0.03
RUNX1-213ENST00000469087 C8orf76Q96K31 380 aa14.88□□□□□ -0.03
RUNX1-213ENST00000469087 NUP88Q99567 741 aaPredicted RBP14.88□□□□□ -0.03
RUNX1-213ENST00000469087 MYH6P13533 1939 aa14.87□□□□□ -0.03
RUNX1-213ENST00000469087 H3BQV1 296 aa14.87□□□□□ -0.03
RUNX1-213ENST00000469087 NF2P35240 595 aa14.87□□□□□ -0.03
RUNX1-213ENST00000469087 AKAP17AQ02040 695 aaKnown RBP14.87□□□□□ -0.03
RUNX1-213ENST00000469087 ZYXQ15942 572 aaKnown RBP14.87□□□□□ -0.03
RUNX1-213ENST00000469087 NOL9Q5SY16 702 aaKnown RBP14.87□□□□□ -0.03
RUNX1-213ENST00000469087 GPATCH4Q5T3I0 446 aaKnown RBP14.87□□□□□ -0.03
RUNX1-213ENST00000469087 IFFO2Q5TF58 517 aa14.87□□□□□ -0.03
RUNX1-213ENST00000469087 GMCL1Q96IK5 515 aa14.87□□□□□ -0.03
RUNX1-213ENST00000469087 SPZ1Q9BXG8 430 aa14.87□□□□□ -0.03
RUNX1-213ENST00000469087 RIOX1Q9H6W3 641 aa14.87□□□□□ -0.03
RUNX1-213ENST00000469087 VCPKMTQ9H867 229 aa14.87□□□□□ -0.03
RUNX1-213ENST00000469087 VAT1LQ9HCJ6 419 aa14.87□□□□□ -0.03
RUNX1-213ENST00000469087 DOCK1Q14185 1865 aa14.87□□□□□ -0.03
RUNX1-213ENST00000469087 SLC16A2P36021 539 aa14.86□□□□□ -0.03
RUNX1-213ENST00000469087 CCDC96Q2M329 555 aa14.86□□□□□ -0.03
RUNX1-213ENST00000469087 LDHDQ86WU2 507 aa14.86□□□□□ -0.03
RUNX1-213ENST00000469087 WASF1Q92558 559 aa14.86□□□□□ -0.03
RUNX1-213ENST00000469087 SHISA4Q96DD7 197 aa14.86□□□□□ -0.03
RUNX1-213ENST00000469087 GOPCQ9HD26 462 aa14.86□□□□□ -0.03
RUNX1-213ENST00000469087 PICK1Q9NRD5 415 aa14.86□□□□□ -0.03
RUNX1-213ENST00000469087 ZHX2Q9Y6X8 837 aa14.86□□□□□ -0.03
RUNX1-213ENST00000469087 F13A1P00488 732 aa14.85□□□□□ -0.03
RUNX1-213ENST00000469087 IREB2P48200 963 aaKnown RBP14.85□□□□□ -0.03
RUNX1-213ENST00000469087 SPP2Q13103 211 aa14.85□□□□□ -0.03
RUNX1-213ENST00000469087 VGLL4Q14135 290 aa14.85□□□□□ -0.03
RUNX1-213ENST00000469087 KRT40Q6A162 431 aa14.85□□□□□ -0.03
RUNX1-213ENST00000469087 FERMT3Q86UX7 667 aa14.85□□□□□ -0.03
RUNX1-213ENST00000469087 CHAMP1Q96JM3 812 aa14.85□□□□□ -0.03
RUNX1-213ENST00000469087 WDR18Q9BV38 432 aa14.85□□□□□ -0.03
RUNX1-213ENST00000469087 KIAA1683Q9H0B3 1180 aa14.85□□□□□ -0.03
RUNX1-213ENST00000469087 SH2D4AQ9H788 454 aa14.85□□□□□ -0.03
RUNX1-213ENST00000469087 SNCAIPQ9Y6H5 919 aa14.85□□□□□ -0.03
RUNX1-213ENST00000469087 USP17L10C9JJH3 530 aa14.85□□□□□ -0.03
RUNX1-213ENST00000469087 BMP3P12645 472 aa14.85□□□□□ -0.03
RUNX1-213ENST00000469087 SCG2P13521 617 aa14.85□□□□□ -0.03
RUNX1-213ENST00000469087 DGKZQ13574 1117 aa14.85□□□□□ -0.03
RUNX1-213ENST00000469087 MAP3K11Q16584 847 aa14.85□□□□□ -0.03
RUNX1-213ENST00000469087 PFKFB3Q16875 520 aaPredicted RBP14.85□□□□□ -0.03
RUNX1-213ENST00000469087 ADGRF4Q8IZF3 695 aa14.85□□□□□ -0.03
RUNX1-213ENST00000469087 PIGSQ96S52 555 aa14.85□□□□□ -0.03
RUNX1-213ENST00000469087 FEZ1Q99689 392 aa14.85□□□□□ -0.03
RUNX1-213ENST00000469087 TMEM232C9JQI7 657 aa14.84□□□□□ -0.03
RUNX1-213ENST00000469087 TTLL12Q14166 644 aaPredicted RBP14.84□□□□□ -0.03
RUNX1-213ENST00000469087 ZNF280CQ8ND82 737 aa14.84□□□□□ -0.03
RUNX1-213ENST00000469087 RGS22Q8NE09 1264 aa14.84□□□□□ -0.03
RUNX1-213ENST00000469087 JMJD4Q9H9V9 463 aa14.84□□□□□ -0.03
RUNX1-213ENST00000469087 VPS54Q9P1Q0 977 aa14.84□□□□□ -0.03
RUNX1-213ENST00000469087 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.84□□□□□ -0.03
RUNX1-213ENST00000469087 ISY1Q9ULR0 285 aaKnown RBP14.84□□□□□ -0.03
RUNX1-213ENST00000469087 KCNJ14Q9UNX9 436 aa14.84□□□□□ -0.03
RUNX1-213ENST00000469087 PHIPQ8WWQ0 1821 aa14.84□□□□□ -0.03
RUNX1-213ENST00000469087 MTMR2Q13614 643 aa14.83□□□□□ -0.03
RUNX1-213ENST00000469087 FOXD4L6Q3SYB3 417 aaPredicted RBP14.83□□□□□ -0.03
RUNX1-213ENST00000469087 FAM83BQ5T0W9 1011 aa14.83□□□□□ -0.03
RUNX1-213ENST00000469087 FOXD4L3Q6VB84 417 aaPredicted RBP14.83□□□□□ -0.03
RUNX1-213ENST00000469087 HOMER1Q86YM7 354 aa14.83□□□□□ -0.03
RUNX1-213ENST00000469087 ANKRD13AQ8IZ07 590 aa14.83□□□□□ -0.03
RUNX1-213ENST00000469087 RRP36Q96EU6 259 aaKnown RBP14.83□□□□□ -0.03
RUNX1-213ENST00000469087 ZNF408Q9H9D4 720 aa14.83□□□□□ -0.03
RUNX1-213ENST00000469087 AS3MTQ9HBK9 375 aa14.83□□□□□ -0.03
RUNX1-213ENST00000469087 EMILIN3Q9NT22 766 aa14.83□□□□□ -0.03
RUNX1-213ENST00000469087 RBM27Q9P2N5 1060 aaKnown RBP14.83□□□□□ -0.03
RUNX1-213ENST00000469087 AFG3L2Q9Y4W6 797 aa14.83□□□□□ -0.03
RUNX1-213ENST00000469087 PAPPA2Q9BXP8 1791 aa14.83□□□□□ -0.04
RUNX1-213ENST00000469087 TRIM75PA6NK02 468 aa14.83□□□□□ -0.04
RUNX1-213ENST00000469087 BACE1P56817 501 aa14.83□□□□□ -0.04
RUNX1-213ENST00000469087 TRIM29Q14134 588 aa14.83□□□□□ -0.04
RUNX1-213ENST00000469087 MCTP1Q6DN14 999 aa14.83□□□□□ -0.04
RUNX1-213ENST00000469087 BTNL9Q6UXG8 535 aa14.83□□□□□ -0.04
RUNX1-213ENST00000469087 CLEC17AQ6ZS10 378 aa14.83□□□□□ -0.04
RUNX1-213ENST00000469087 CNKSR2Q8WXI2 1034 aa14.83□□□□□ -0.04
RUNX1-213ENST00000469087 CLMNQ96JQ2 1002 aa14.83□□□□□ -0.04
RUNX1-213ENST00000469087 CSADQ9Y600 493 aa14.83□□□□□ -0.04
RUNX1-213ENST00000469087 OTOFQ9HC10 1997 aa14.83□□□□□ -0.04
RUNX1-213ENST00000469087 ITGBL1O95965 494 aaPredicted RBP14.82□□□□□ -0.04
RUNX1-213ENST00000469087 RESTQ13127 1097 aa14.82□□□□□ -0.04
RUNX1-213ENST00000469087 LDLRAD1Q5T700 205 aa14.82□□□□□ -0.04
RUNX1-213ENST00000469087 FAM173BQ6P4H8 233 aa14.82□□□□□ -0.04
RUNX1-213ENST00000469087 ARMC9Q7Z3E5 817 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms