RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 VCPKMTQ9H867 229 aa20.35■□□□□ 0.85
RPL39-202ENST00000468844 ZHX2Q9Y6X8 837 aa20.35■□□□□ 0.85
RPL39-202ENST00000468844 COL11A1P12107 1806 aaPredicted RBP20.34■□□□□ 0.85
RPL39-202ENST00000468844 KLRF2D3W0D1 207 aa20.34■□□□□ 0.85
RPL39-202ENST00000468844 SLC1A4P43007 532 aa20.34■□□□□ 0.85
RPL39-202ENST00000468844 SLC35G1Q2M3R5 365 aa20.34■□□□□ 0.85
RPL39-202ENST00000468844 ASPRV1Q53RT3 343 aa20.34■□□□□ 0.85
RPL39-202ENST00000468844 KCTD1Q719H9 257 aa20.34■□□□□ 0.85
RPL39-202ENST00000468844 ARMC9Q7Z3E5 817 aa20.34■□□□□ 0.85
RPL39-202ENST00000468844 DCAF4Q8WV16 495 aa20.34■□□□□ 0.85
RPL39-202ENST00000468844 GMCL1Q96IK5 515 aa20.34■□□□□ 0.85
RPL39-202ENST00000468844 FEZ1Q99689 392 aa20.34■□□□□ 0.85
RPL39-202ENST00000468844 GOPCQ9HD26 462 aa20.34■□□□□ 0.85
RPL39-202ENST00000468844 USP17L10C9JJH3 530 aa20.33■□□□□ 0.85
RPL39-202ENST00000468844 CYTH3O43739 400 aa20.33■□□□□ 0.85
RPL39-202ENST00000468844 CELF2O95319 508 aaKnown RBP20.33■□□□□ 0.85
RPL39-202ENST00000468844 SPP2Q13103 211 aa20.33■□□□□ 0.85
RPL39-202ENST00000468844 DGKZQ13574 1117 aa20.33■□□□□ 0.85
RPL39-202ENST00000468844 ZNF280CQ8ND82 737 aa20.33■□□□□ 0.85
RPL39-202ENST00000468844 CNKSR2Q8WXI2 1034 aa20.33■□□□□ 0.85
RPL39-202ENST00000468844 NUP88Q99567 741 aaPredicted RBP20.33■□□□□ 0.85
RPL39-202ENST00000468844 SLC26A6Q9BXS9 759 aa20.33■□□□□ 0.85
RPL39-202ENST00000468844 AS3MTQ9HBK9 375 aa20.33■□□□□ 0.85
RPL39-202ENST00000468844 STK36Q9NRP7 1315 aa20.33■□□□□ 0.85
RPL39-202ENST00000468844 FMNL1O95466 1100 aaPredicted RBP20.33■□□□□ 0.84
RPL39-202ENST00000468844 GNAQP50148 359 aa20.33■□□□□ 0.84
RPL39-202ENST00000468844 MTMR2Q13614 643 aa20.33■□□□□ 0.84
RPL39-202ENST00000468844 PKP1Q13835 747 aa20.33■□□□□ 0.84
RPL39-202ENST00000468844 CCDC96Q2M329 555 aa20.33■□□□□ 0.84
RPL39-202ENST00000468844 GPATCH4Q5T3I0 446 aaKnown RBP20.33■□□□□ 0.84
RPL39-202ENST00000468844 LDLRAD1Q5T700 205 aa20.33■□□□□ 0.84
RPL39-202ENST00000468844 RNF26Q9BY78 433 aaPredicted RBP20.33■□□□□ 0.84
RPL39-202ENST00000468844 KIAA1683Q9H0B3 1180 aa20.33■□□□□ 0.84
RPL39-202ENST00000468844 ELP3Q9H9T3 547 aa20.33■□□□□ 0.84
RPL39-202ENST00000468844 ORC3Q9UBD5 711 aaPredicted RBP20.33■□□□□ 0.84
RPL39-202ENST00000468844 TRIM75PA6NK02 468 aa20.32■□□□□ 0.84
RPL39-202ENST00000468844 BACE1P56817 501 aa20.32■□□□□ 0.84
RPL39-202ENST00000468844 GBA2Q9HCG7 927 aaPredicted RBP20.32■□□□□ 0.84
RPL39-202ENST00000468844 GPCPD1Q9NPB8 672 aa20.32■□□□□ 0.84
RPL39-202ENST00000468844 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.32■□□□□ 0.84
RPL39-202ENST00000468844 AFG3L2Q9Y4W6 797 aa20.32■□□□□ 0.84
RPL39-202ENST00000468844 FKBP1BP68106 108 aa20.31■□□□□ 0.84
RPL39-202ENST00000468844 SSRP1Q08945 709 aaKnown RBP20.31■□□□□ 0.84
RPL39-202ENST00000468844 CST9Q5W186 159 aa20.31■□□□□ 0.84
RPL39-202ENST00000468844 TTBK2Q6IQ55 1244 aa20.31■□□□□ 0.84
RPL39-202ENST00000468844 FAM184AQ8NB25 1140 aa20.31■□□□□ 0.84
RPL39-202ENST00000468844 hCG_1642624A0A1W2PR95 340 aa20.31■□□□□ 0.84
RPL39-202ENST00000468844 BMP3P12645 472 aa20.31■□□□□ 0.84
RPL39-202ENST00000468844 SYT1P21579 422 aa20.31■□□□□ 0.84
RPL39-202ENST00000468844 TRIM22Q8IYM9 498 aa20.31■□□□□ 0.84
RPL39-202ENST00000468844 AIFM3Q96NN9 605 aa20.31■□□□□ 0.84
RPL39-202ENST00000468844 LZTS2Q9BRK4 669 aa20.31■□□□□ 0.84
RPL39-202ENST00000468844 SPZ1Q9BXG8 430 aa20.31■□□□□ 0.84
RPL39-202ENST00000468844 UBA5Q9GZZ9 404 aa20.31■□□□□ 0.84
RPL39-202ENST00000468844 SPDYE5A6NIY4 337 aa20.3■□□□□ 0.84
RPL39-202ENST00000468844 PASKQ96RG2 1323 aa20.3■□□□□ 0.84
RPL39-202ENST00000468844 PRPF3O43395 683 aaKnown RBP20.29■□□□□ 0.84
RPL39-202ENST00000468844 DEXIO95424 95 aa20.29■□□□□ 0.84
RPL39-202ENST00000468844 SMARCA1P28370 1054 aa20.29■□□□□ 0.84
RPL39-202ENST00000468844 USP14P54578 494 aa20.29■□□□□ 0.84
RPL39-202ENST00000468844 PKN1Q16512 942 aa20.29■□□□□ 0.84
RPL39-202ENST00000468844 FAM83BQ5T0W9 1011 aa20.29■□□□□ 0.84
RPL39-202ENST00000468844 LARP1BQ659C4 914 aaKnown RBP20.29■□□□□ 0.84
RPL39-202ENST00000468844 ERO1BQ86YB8 467 aa20.29■□□□□ 0.84
RPL39-202ENST00000468844 RIOX1Q9H6W3 641 aa20.29■□□□□ 0.84
RPL39-202ENST00000468844 EMILIN3Q9NT22 766 aa20.29■□□□□ 0.84
RPL39-202ENST00000468844 ISY1Q9ULR0 285 aaKnown RBP20.29■□□□□ 0.84
RPL39-202ENST00000468844 CIZ1Q9ULV3 898 aaPredicted RBP20.29■□□□□ 0.84
RPL39-202ENST00000468844 V9GY48 417 aaPredicted RBP20.29■□□□□ 0.84
RPL39-202ENST00000468844 SLC16A2P36021 539 aa20.29■□□□□ 0.84
RPL39-202ENST00000468844 PPATQ06203 517 aa20.29■□□□□ 0.84
RPL39-202ENST00000468844 LPAR1Q92633 364 aa20.29■□□□□ 0.84
RPL39-202ENST00000468844 OTUD5Q96G74 571 aa20.29■□□□□ 0.84
RPL39-202ENST00000468844 UNCXA6NJT0 531 aa20.28■□□□□ 0.84
RPL39-202ENST00000468844 TMEM232C9JQI7 657 aa20.28■□□□□ 0.84
RPL39-202ENST00000468844 IRF6O14896 467 aa20.28■□□□□ 0.84
RPL39-202ENST00000468844 HMGCS2P54868 508 aa20.28■□□□□ 0.84
RPL39-202ENST00000468844 C2orf69Q8N8R5 385 aa20.28■□□□□ 0.84
RPL39-202ENST00000468844 PIBF1Q8WXW3 757 aa20.28■□□□□ 0.84
RPL39-202ENST00000468844 GJB4Q9NTQ9 266 aa20.28■□□□□ 0.84
RPL39-202ENST00000468844 KIF3AQ9Y496 699 aa20.28■□□□□ 0.84
RPL39-202ENST00000468844 STX6O43752 255 aa20.27■□□□□ 0.84
RPL39-202ENST00000468844 VCAM1P19320 739 aa20.27■□□□□ 0.84
RPL39-202ENST00000468844 PDCP20941 246 aa20.27■□□□□ 0.84
RPL39-202ENST00000468844 YY1P25490 414 aa20.27■□□□□ 0.84
RPL39-202ENST00000468844 ADGRF4Q8IZF3 695 aa20.27■□□□□ 0.84
RPL39-202ENST00000468844 CHMP5Q9NZZ3 219 aa20.27■□□□□ 0.84
RPL39-202ENST00000468844 C19orf81C9J6K1 198 aa20.27■□□□□ 0.84
RPL39-202ENST00000468844 WDR46O15213 610 aaKnown RBP20.27■□□□□ 0.84
RPL39-202ENST00000468844 STAT2P52630 851 aa20.27■□□□□ 0.84
RPL39-202ENST00000468844 AKAP17AQ02040 695 aaKnown RBP20.27■□□□□ 0.84
RPL39-202ENST00000468844 OPTNQ96CV9 577 aa20.27■□□□□ 0.84
RPL39-202ENST00000468844 C12orf42Q96LP6 360 aa20.27■□□□□ 0.84
RPL39-202ENST00000468844 ALG1Q9BT22 464 aa20.27■□□□□ 0.84
RPL39-202ENST00000468844 VAT1LQ9HCJ6 419 aa20.27■□□□□ 0.84
RPL39-202ENST00000468844 ZDHHC9Q9Y397 364 aa20.27■□□□□ 0.84
RPL39-202ENST00000468844 FOSBP53539 338 aa20.26■□□□□ 0.83
RPL39-202ENST00000468844 BTNL9Q6UXG8 535 aa20.26■□□□□ 0.83
RPL39-202ENST00000468844 HOMER1Q86YM7 354 aa20.26■□□□□ 0.83
RPL39-202ENST00000468844 ZNF784Q8NCA9 323 aaPredicted RBP20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms