RNA–Protein interactions for RNA: ENST00000468371.5

SHQ1-205, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 1 (best)

Gene SHQ1, Length 4,024 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-205ENST00000468371 TFIP11Q9UBB9 837 aaKnown RBP6.88□□□□□ -1.31
SHQ1-205ENST00000468371 FAM198AQ9UFP1 575 aa6.88□□□□□ -1.31
SHQ1-205ENST00000468371 PNMA2Q9UL42 364 aa6.88□□□□□ -1.31
SHQ1-205ENST00000468371 AGTPBP1Q9UPW5 1226 aa6.88□□□□□ -1.31
SHQ1-205ENST00000468371 PDS5AQ29RF7 1337 aaKnown RBP6.88□□□□□ -1.31
SHQ1-205ENST00000468371 DLG5Q8TDM6 1919 aa6.88□□□□□ -1.31
SHQ1-205ENST00000468371 CCDC174Q6PII3 467 aa6.88□□□□□ -1.31
SHQ1-205ENST00000468371 PLEKHH3Q7Z736 793 aa6.88□□□□□ -1.31
SHQ1-205ENST00000468371 PROCA1Q8NCQ7 364 aaPredicted RBP6.88□□□□□ -1.31
SHQ1-205ENST00000468371 TMEM232C9JQI7 657 aa6.88□□□□□ -1.31
SHQ1-205ENST00000468371 POTEB2H3BUK9 544 aa6.88□□□□□ -1.31
SHQ1-205ENST00000468371 PRKAB2O43741 272 aa6.88□□□□□ -1.31
SHQ1-205ENST00000468371 COPB2P35606 906 aa6.88□□□□□ -1.31
SHQ1-205ENST00000468371 ZNF76P36508 570 aa6.88□□□□□ -1.31
SHQ1-205ENST00000468371 TM4SF4P48230 202 aa6.88□□□□□ -1.31
SHQ1-205ENST00000468371 TPM4P67936 248 aa6.88□□□□□ -1.31
SHQ1-205ENST00000468371 FAM47AQ5JRC9 791 aa6.88□□□□□ -1.31
SHQ1-205ENST00000468371 ZFPM1Q8IX07 1006 aa6.88□□□□□ -1.31
SHQ1-205ENST00000468371 SIRT2Q8IXJ6 389 aa6.88□□□□□ -1.31
SHQ1-205ENST00000468371 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.88□□□□□ -1.31
SHQ1-205ENST00000468371 SDF4Q9BRK5 362 aa6.88□□□□□ -1.31
SHQ1-205ENST00000468371 NUP62CLQ9H1M0 184 aa6.88□□□□□ -1.31
SHQ1-205ENST00000468371 DCP1AQ9NPI6 582 aaPredicted RBP6.88□□□□□ -1.31
SHQ1-205ENST00000468371 PRDM5Q9NQX1 630 aaPredicted RBP6.88□□□□□ -1.31
SHQ1-205ENST00000468371 HELLSQ9NRZ9 838 aa6.88□□□□□ -1.31
SHQ1-205ENST00000468371 TRMT1Q9NXH9 659 aaKnown RBP6.88□□□□□ -1.31
SHQ1-205ENST00000468371 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.88□□□□□ -1.31
SHQ1-205ENST00000468371 V9GYY5 206 aaPredicted RBP6.88□□□□□ -1.31
SHQ1-205ENST00000468371 GADD45BO75293 160 aaPredicted RBP6.87□□□□□ -1.31
SHQ1-205ENST00000468371 FLT3LGP49771 235 aa6.87□□□□□ -1.31
SHQ1-205ENST00000468371 ZNF445P59923 1031 aa6.87□□□□□ -1.31
SHQ1-205ENST00000468371 KRT85P78386 507 aa6.87□□□□□ -1.31
SHQ1-205ENST00000468371 IFIT1BQ5T764 474 aaKnown RBP6.87□□□□□ -1.31
SHQ1-205ENST00000468371 IFNL3Q8IZI9 196 aa6.87□□□□□ -1.31
SHQ1-205ENST00000468371 LRRC47Q8N1G4 583 aaKnown RBP6.87□□□□□ -1.31
SHQ1-205ENST00000468371 LPAR1Q92633 364 aa6.87□□□□□ -1.31
SHQ1-205ENST00000468371 ZNF512BQ96KM6 892 aaPredicted RBP6.87□□□□□ -1.31
SHQ1-205ENST00000468371 PPP1R9BQ96SB3 815 aa6.87□□□□□ -1.31
SHQ1-205ENST00000468371 ASCC2Q9H1I8 757 aaPredicted RBP6.87□□□□□ -1.31
SHQ1-205ENST00000468371 FBXO40Q9UH90 709 aa6.87□□□□□ -1.31
SHQ1-205ENST00000468371 EVI5O60447 810 aa6.87□□□□□ -1.31
SHQ1-205ENST00000468371 PPFIA3O75145 1194 aa6.87□□□□□ -1.31
SHQ1-205ENST00000468371 TTLL1O95922 423 aa6.87□□□□□ -1.31
SHQ1-205ENST00000468371 TPM3P06753 285 aa6.87□□□□□ -1.31
SHQ1-205ENST00000468371 KIF5BP33176 963 aa6.87□□□□□ -1.31
SHQ1-205ENST00000468371 STAT3P40763 770 aa6.87□□□□□ -1.31
SHQ1-205ENST00000468371 HERVK_113P62684 666 aa6.87□□□□□ -1.31
SHQ1-205ENST00000468371 FAM47CQ5HY64 1035 aa6.87□□□□□ -1.31
SHQ1-205ENST00000468371 TRMT44Q8IYL2 757 aaKnown RBP6.87□□□□□ -1.31
SHQ1-205ENST00000468371 FAM177A1Q8N128 213 aaPredicted RBP6.87□□□□□ -1.31
SHQ1-205ENST00000468371 MB21D1Q8N884 522 aa6.87□□□□□ -1.31
SHQ1-205ENST00000468371 SLAIN1Q8ND83 568 aa6.87□□□□□ -1.31
SHQ1-205ENST00000468371 GPT2Q8TD30 523 aa6.87□□□□□ -1.31
SHQ1-205ENST00000468371 SOCS4Q8WXH5 440 aa6.87□□□□□ -1.31
SHQ1-205ENST00000468371 PDRG1Q9NUG6 133 aa6.87□□□□□ -1.31
SHQ1-205ENST00000468371 CYP46A1Q9Y6A2 500 aa6.87□□□□□ -1.31
SHQ1-205ENST00000468371 BMP3P12645 472 aa6.87□□□□□ -1.31
SHQ1-205ENST00000468371 TNNT1P13805 278 aa6.87□□□□□ -1.31
SHQ1-205ENST00000468371 PPARAQ07869 468 aa6.87□□□□□ -1.31
SHQ1-205ENST00000468371 CCDC73Q6ZRK6 1079 aa6.87□□□□□ -1.31
SHQ1-205ENST00000468371 SH3TC2Q8TF17 1288 aa6.87□□□□□ -1.31
SHQ1-205ENST00000468371 DEFB118Q96PH6 123 aa6.87□□□□□ -1.31
SHQ1-205ENST00000468371 CCDC94Q9BW85 323 aaPredicted RBP6.87□□□□□ -1.31
SHQ1-205ENST00000468371 COL5A3P25940 1745 aaPredicted RBP6.87□□□□□ -1.31
SHQ1-205ENST00000468371 ZEB2O60315 1214 aa6.86□□□□□ -1.31
SHQ1-205ENST00000468371 SMC2O95347 1197 aa6.86□□□□□ -1.31
SHQ1-205ENST00000468371 GSPT1P15170 499 aaKnown RBP6.86□□□□□ -1.31
SHQ1-205ENST00000468371 IBSPP21815 317 aaPredicted RBP6.86□□□□□ -1.31
SHQ1-205ENST00000468371 MAP3K11Q16584 847 aa6.86□□□□□ -1.31
SHQ1-205ENST00000468371 HS1BP3Q53T59 392 aa6.86□□□□□ -1.31
SHQ1-205ENST00000468371 ARRDC4Q8NCT1 418 aa6.86□□□□□ -1.31
SHQ1-205ENST00000468371 SPATA32Q96LK8 384 aa6.86□□□□□ -1.31
SHQ1-205ENST00000468371 TCEANC2Q96MN5 208 aa6.86□□□□□ -1.31
SHQ1-205ENST00000468371 MMP19Q99542 508 aa6.86□□□□□ -1.31
SHQ1-205ENST00000468371 RABGAP1Q9Y3P9 1069 aa6.86□□□□□ -1.31
SHQ1-205ENST00000468371 SNCAIPQ9Y6H5 919 aa6.86□□□□□ -1.31
SHQ1-205ENST00000468371 GAKO14976 1311 aa6.86□□□□□ -1.31
SHQ1-205ENST00000468371 CYP2D7A0A087X1C5 515 aa6.86□□□□□ -1.31
SHQ1-205ENST00000468371 STX6O43752 255 aa6.86□□□□□ -1.31
SHQ1-205ENST00000468371 CYP2D6P10635 497 aa6.86□□□□□ -1.31
SHQ1-205ENST00000468371 CPA1P15085 419 aa6.86□□□□□ -1.31
SHQ1-205ENST00000468371 OTOP1Q7RTM1 612 aa6.86□□□□□ -1.31
SHQ1-205ENST00000468371 CDAN1Q8IWY9 1227 aa6.86□□□□□ -1.31
SHQ1-205ENST00000468371 SLC44A5Q8NCS7 719 aa6.86□□□□□ -1.31
SHQ1-205ENST00000468371 MNS1Q8NEH6 495 aa6.86□□□□□ -1.31
SHQ1-205ENST00000468371 CCDC43Q96MW1 224 aaKnown RBP6.86□□□□□ -1.31
SHQ1-205ENST00000468371 EHMT1Q9H9B1 1298 aa6.86□□□□□ -1.31
SHQ1-205ENST00000468371 DDX4Q9NQI0 724 aaKnown RBP6.86□□□□□ -1.31
SHQ1-205ENST00000468371 ADD3Q9UEY8 706 aaKnown RBP6.86□□□□□ -1.31
SHQ1-205ENST00000468371 SCN7AQ01118 1682 aa6.86□□□□□ -1.31
SHQ1-205ENST00000468371 IGF2BP3O00425 579 aaKnown RBP eCLIP6.86□□□□□ -1.31
SHQ1-205ENST00000468371 FARP2O94887 1054 aaPredicted RBP6.86□□□□□ -1.31
SHQ1-205ENST00000468371 EEF2P13639 858 aaKnown RBP6.86□□□□□ -1.31
SHQ1-205ENST00000468371 LACTBP83111 547 aaPredicted RBP6.86□□□□□ -1.31
SHQ1-205ENST00000468371 NMIQ13287 307 aaPredicted RBP6.86□□□□□ -1.31
SHQ1-205ENST00000468371 NECAB2Q7Z6G3 386 aa6.86□□□□□ -1.31
SHQ1-205ENST00000468371 NECAB1Q8N987 351 aa6.86□□□□□ -1.31
SHQ1-205ENST00000468371 PRPF38AQ8NAV1 312 aaKnown RBP6.86□□□□□ -1.31
SHQ1-205ENST00000468371 ZBTB9Q96C00 473 aa6.86□□□□□ -1.31
SHQ1-205ENST00000468371 P2RX7Q99572 595 aaKnown RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms