RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 NOSTRINQ8IVI9 506 aa23.74■■□□□ 1.39
TMEM53-207ENST00000468117 GPKOWQ92917 476 aaPredicted RBP eCLIP23.74■■□□□ 1.39
TMEM53-207ENST00000468117 TEPSINQ96N21 525 aa23.74■■□□□ 1.39
TMEM53-207ENST00000468117 UBA5Q9GZZ9 404 aa23.74■■□□□ 1.39
TMEM53-207ENST00000468117 TRPM4Q8TD43 1214 aa23.74■■□□□ 1.39
TMEM53-207ENST00000468117 FOXP1Q9H334 677 aaPredicted RBP23.74■■□□□ 1.39
TMEM53-207ENST00000468117 RCOR1Q9UKL0 485 aa23.74■■□□□ 1.39
TMEM53-207ENST00000468117 POLR2AP24928 1970 aaKnown RBP23.73■■□□□ 1.39
TMEM53-207ENST00000468117 RAD21O60216 631 aa23.73■■□□□ 1.39
TMEM53-207ENST00000468117 EPS15P42566 896 aa23.73■■□□□ 1.39
TMEM53-207ENST00000468117 VAT1LQ9HCJ6 419 aa23.73■■□□□ 1.39
TMEM53-207ENST00000468117 GPCPD1Q9NPB8 672 aa23.73■■□□□ 1.39
TMEM53-207ENST00000468117 CLIC4Q9Y696 253 aa23.73■■□□□ 1.39
TMEM53-207ENST00000468117 ATAD5Q96QE3 1844 aa23.73■■□□□ 1.39
TMEM53-207ENST00000468117 DDNO94850 711 aaPredicted RBP23.72■■□□□ 1.39
TMEM53-207ENST00000468117 ZNF543Q08ER8 600 aa23.72■■□□□ 1.39
TMEM53-207ENST00000468117 RTEL1Q9NZ71 1219 aa23.72■■□□□ 1.39
TMEM53-207ENST00000468117 TMEM63CQ9P1W3 806 aa23.72■■□□□ 1.39
TMEM53-207ENST00000468117 HOMER1Q86YM7 354 aa23.72■■□□□ 1.39
TMEM53-207ENST00000468117 PGBD1Q96JS3 809 aa23.72■■□□□ 1.39
TMEM53-207ENST00000468117 DEFB129Q9H1M3 183 aa23.72■■□□□ 1.39
TMEM53-207ENST00000468117 SMARCA1P28370 1054 aa23.71■■□□□ 1.39
TMEM53-207ENST00000468117 NPY5RQ15761 445 aa23.71■■□□□ 1.39
TMEM53-207ENST00000468117 CCDC96Q2M329 555 aa23.71■■□□□ 1.39
TMEM53-207ENST00000468117 C9orf131Q5VYM1 1079 aa23.71■■□□□ 1.39
TMEM53-207ENST00000468117 POLR3EQ9NVU0 708 aa23.71■■□□□ 1.39
TMEM53-207ENST00000468117 KRT2P35908 639 aa23.71■■□□□ 1.39
TMEM53-207ENST00000468117 MAP3K10Q02779 954 aa23.71■■□□□ 1.39
TMEM53-207ENST00000468117 ANGEL2Q5VTE6 544 aaKnown RBP23.71■■□□□ 1.39
TMEM53-207ENST00000468117 WWC2Q6AWC2 1192 aa23.71■■□□□ 1.39
TMEM53-207ENST00000468117 KCTD1Q719H9 257 aa23.71■■□□□ 1.39
TMEM53-207ENST00000468117 RIOX1Q9H6W3 641 aa23.71■■□□□ 1.39
TMEM53-207ENST00000468117 ZBTB21Q9ULJ3 1066 aa23.71■■□□□ 1.39
TMEM53-207ENST00000468117 GOLGA6L4A6NEF3 574 aa23.7■■□□□ 1.38
TMEM53-207ENST00000468117 NLRP5P59047 1200 aa23.7■■□□□ 1.38
TMEM53-207ENST00000468117 TTBK2Q6IQ55 1244 aa23.7■■□□□ 1.38
TMEM53-207ENST00000468117 TYW1BQ6NUM6 668 aa23.7■■□□□ 1.38
TMEM53-207ENST00000468117 HEATR3Q7Z4Q2 680 aa23.7■■□□□ 1.38
TMEM53-207ENST00000468117 RRP36Q96EU6 259 aaKnown RBP23.7■■□□□ 1.38
TMEM53-207ENST00000468117 PIGSQ96S52 555 aa23.7■■□□□ 1.38
TMEM53-207ENST00000468117 A0A1W2PRG0 241 aa23.69■■□□□ 1.38
TMEM53-207ENST00000468117 ANO1Q5XXA6 986 aa23.69■■□□□ 1.38
TMEM53-207ENST00000468117 SLFN13Q68D06 897 aa23.69■■□□□ 1.38
TMEM53-207ENST00000468117 LINC00301Q8NCQ3 95 aa23.69■■□□□ 1.38
TMEM53-207ENST00000468117 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.69■■□□□ 1.38
TMEM53-207ENST00000468117 ISY1Q9ULR0 285 aaKnown RBP23.69■■□□□ 1.38
TMEM53-207ENST00000468117 CAP2P40123 477 aa23.69■■□□□ 1.38
TMEM53-207ENST00000468117 NASPP49321 788 aaPredicted RBP23.69■■□□□ 1.38
TMEM53-207ENST00000468117 HIRAP54198 1017 aaPredicted RBP23.69■■□□□ 1.38
TMEM53-207ENST00000468117 STK38Q15208 465 aa23.69■■□□□ 1.38
TMEM53-207ENST00000468117 GPATCH4Q5T3I0 446 aaKnown RBP23.69■■□□□ 1.38
TMEM53-207ENST00000468117 SH3GLB2Q9NR46 395 aa23.69■■□□□ 1.38
TMEM53-207ENST00000468117 SEC63Q9UGP8 760 aaKnown RBP23.69■■□□□ 1.38
TMEM53-207ENST00000468117 F5H6K3 240 aa23.68■■□□□ 1.38
TMEM53-207ENST00000468117 SLC1A4P43007 532 aa23.68■■□□□ 1.38
TMEM53-207ENST00000468117 KLRC3Q07444 240 aa23.68■■□□□ 1.38
TMEM53-207ENST00000468117 ZSCAN23Q3MJ62 389 aa23.68■■□□□ 1.38
TMEM53-207ENST00000468117 BRMS1Q9HCU9 246 aa23.68■■□□□ 1.38
TMEM53-207ENST00000468117 BARHL2Q9NY43 387 aa23.68■■□□□ 1.38
TMEM53-207ENST00000468117 YEATS4O95619 227 aa23.67■■□□□ 1.38
TMEM53-207ENST00000468117 SLC16A2P36021 539 aa23.67■■□□□ 1.38
TMEM53-207ENST00000468117 ECE1P42892 770 aa23.67■■□□□ 1.38
TMEM53-207ENST00000468117 SF3A1Q15459 793 aaKnown RBP23.67■■□□□ 1.38
TMEM53-207ENST00000468117 FAM205CA6NFA0 338 aa23.67■■□□□ 1.38
TMEM53-207ENST00000468117 STXBP3O00186 592 aa23.67■■□□□ 1.38
TMEM53-207ENST00000468117 ADAMTS3O15072 1205 aa23.67■■□□□ 1.38
TMEM53-207ENST00000468117 ME1P48163 572 aa23.67■■□□□ 1.38
TMEM53-207ENST00000468117 TOB1P50616 345 aaPredicted RBP23.67■■□□□ 1.38
TMEM53-207ENST00000468117 EARS2Q5JPH6 523 aaKnown RBP23.67■■□□□ 1.38
TMEM53-207ENST00000468117 NBPF12Q5TAG4 269 aaPredicted RBP23.67■■□□□ 1.38
TMEM53-207ENST00000468117 GMCL1P1Q8NEA9 526 aa23.67■■□□□ 1.38
TMEM53-207ENST00000468117 DCAF4Q8WV16 495 aa23.67■■□□□ 1.38
TMEM53-207ENST00000468117 GGA3Q9NZ52 723 aa23.67■■□□□ 1.38
TMEM53-207ENST00000468117 PHF20L1A8MW92 1017 aa23.66■■□□□ 1.38
TMEM53-207ENST00000468117 APOBEC3FQ8IUX4 373 aaKnown RBP23.66■■□□□ 1.38
TMEM53-207ENST00000468117 ADGRF4Q8IZF3 695 aa23.66■■□□□ 1.38
TMEM53-207ENST00000468117 ACER1Q8TDN7 264 aa23.66■■□□□ 1.38
TMEM53-207ENST00000468117 NDUFB10O96000 172 aa23.66■■□□□ 1.38
TMEM53-207ENST00000468117 GPR162Q16538 588 aa23.66■■□□□ 1.38
TMEM53-207ENST00000468117 NOM1Q5C9Z4 860 aaKnown RBP23.66■■□□□ 1.38
TMEM53-207ENST00000468117 PRAMEF18Q5VWM3 479 aa23.66■■□□□ 1.38
TMEM53-207ENST00000468117 BICD2Q8TD16 824 aa23.66■■□□□ 1.38
TMEM53-207ENST00000468117 TNFRSF25Q93038 417 aa23.66■■□□□ 1.38
TMEM53-207ENST00000468117 NUP88Q99567 741 aaPredicted RBP23.66■■□□□ 1.38
TMEM53-207ENST00000468117 JMJD4Q9H9V9 463 aa23.66■■□□□ 1.38
TMEM53-207ENST00000468117 ARHGEF10LQ9HCE6 1279 aa23.66■■□□□ 1.38
TMEM53-207ENST00000468117 SPTLC2O15270 562 aa23.65■■□□□ 1.38
TMEM53-207ENST00000468117 LIG1P18858 919 aa23.65■■□□□ 1.38
TMEM53-207ENST00000468117 CALML3P27482 149 aa23.65■■□□□ 1.38
TMEM53-207ENST00000468117 RILPL1Q5EBL4 403 aa23.65■■□□□ 1.38
TMEM53-207ENST00000468117 CCDC148Q8NFR7 591 aa23.65■■□□□ 1.38
TMEM53-207ENST00000468117 KCNG4Q8TDN1 519 aa23.65■■□□□ 1.38
TMEM53-207ENST00000468117 PCDHA7Q9UN72 937 aa23.65■■□□□ 1.38
TMEM53-207ENST00000468117 LMOD1P29536 600 aaPredicted RBP23.64■■□□□ 1.38
TMEM53-207ENST00000468117 SYAP1Q96A49 352 aaPredicted RBP23.64■■□□□ 1.38
TMEM53-207ENST00000468117 ASNSP08243 561 aa23.64■■□□□ 1.37
TMEM53-207ENST00000468117 NAPAP54920 295 aa23.64■■□□□ 1.37
TMEM53-207ENST00000468117 SLC39A14Q15043 492 aa23.64■■□□□ 1.37
TMEM53-207ENST00000468117 CCDC84Q86UT8 332 aaPredicted RBP23.64■■□□□ 1.37
TMEM53-207ENST00000468117 BLIDQ8IZY5 108 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms