RNA–Protein interactions for RNA: ENST00000467898.3

LCA5-203, Transcript of LCA5, lebercilin, humanhuman

TSL 5 BASIC

Gene LCA5, Length 2,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-203ENST00000467898 PNKPQ96T60 521 aa10.31□□□□□ -0.76
LCA5-203ENST00000467898 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.31□□□□□ -0.76
LCA5-203ENST00000467898 NOD2Q9HC29 1040 aa10.31□□□□□ -0.76
LCA5-203ENST00000467898 DMAP1Q9NPF5 467 aaPredicted RBP10.31□□□□□ -0.76
LCA5-203ENST00000467898 KIF4AO95239 1232 aa10.31□□□□□ -0.76
LCA5-203ENST00000467898 MMEP08473 750 aa10.31□□□□□ -0.76
LCA5-203ENST00000467898 CCNG1P51959 295 aa10.31□□□□□ -0.76
LCA5-203ENST00000467898 EIF4A1P60842 406 aaKnown RBP10.31□□□□□ -0.76
LCA5-203ENST00000467898 ACCSLQ4AC99 568 aa10.31□□□□□ -0.76
LCA5-203ENST00000467898 LACTB2Q53H82 288 aaPredicted RBP10.31□□□□□ -0.76
LCA5-203ENST00000467898 CMPK2Q5EBM0 449 aa10.31□□□□□ -0.76
LCA5-203ENST00000467898 C6orf89Q6UWU4 347 aa10.31□□□□□ -0.76
LCA5-203ENST00000467898 CCDC121Q6ZUS5 278 aa10.31□□□□□ -0.76
LCA5-203ENST00000467898 LRRC43Q8N309 656 aa10.31□□□□□ -0.76
LCA5-203ENST00000467898 RSPH1Q8WYR4 309 aa10.31□□□□□ -0.76
LCA5-203ENST00000467898 TRIM11Q96F44 468 aa10.31□□□□□ -0.76
LCA5-203ENST00000467898 NAP1L3Q99457 506 aaPredicted RBP10.31□□□□□ -0.76
LCA5-203ENST00000467898 ARHGEF10LQ9HCE6 1279 aa10.31□□□□□ -0.76
LCA5-203ENST00000467898 ANO10Q9NW15 660 aa10.31□□□□□ -0.76
LCA5-203ENST00000467898 SLC5A4Q9NY91 659 aa10.31□□□□□ -0.76
LCA5-203ENST00000467898 ZC3H4Q9UPT8 1303 aaKnown RBP10.31□□□□□ -0.76
LCA5-203ENST00000467898 PKD1L3Q7Z443 1732 aa10.31□□□□□ -0.76
LCA5-203ENST00000467898 TUBGCP6Q96RT7 1819 aa10.3□□□□□ -0.76
LCA5-203ENST00000467898 VWA3AA6NCI4 1184 aa10.3□□□□□ -0.76
LCA5-203ENST00000467898 ATF3P18847 181 aa10.3□□□□□ -0.76
LCA5-203ENST00000467898 USP11P51784 963 aa10.3□□□□□ -0.76
LCA5-203ENST00000467898 TMEM62Q0P6H9 643 aa10.3□□□□□ -0.76
LCA5-203ENST00000467898 FLIIQ13045 1269 aa10.3□□□□□ -0.76
LCA5-203ENST00000467898 RSPH3Q86UC2 560 aa10.3□□□□□ -0.76
LCA5-203ENST00000467898 SAPCD2Q86UD0 394 aa10.3□□□□□ -0.76
LCA5-203ENST00000467898 RPAP2Q8IXW5 612 aaPredicted RBP10.3□□□□□ -0.76
LCA5-203ENST00000467898 UBE2OQ9C0C9 1292 aaKnown RBP10.3□□□□□ -0.76
LCA5-203ENST00000467898 DAAM1Q9Y4D1 1078 aa10.3□□□□□ -0.76
LCA5-203ENST00000467898 ALOX15P16050 662 aaPredicted RBP10.3□□□□□ -0.76
LCA5-203ENST00000467898 KIF5BP33176 963 aa10.3□□□□□ -0.76
LCA5-203ENST00000467898 KRT85P78386 507 aa10.3□□□□□ -0.76
LCA5-203ENST00000467898 LMNB2Q03252 620 aa10.3□□□□□ -0.76
LCA5-203ENST00000467898 CBX3Q13185 183 aa10.3□□□□□ -0.76
LCA5-203ENST00000467898 NCCRP1Q6ZVX7 275 aaPredicted RBP10.3□□□□□ -0.76
LCA5-203ENST00000467898 CEP57L1Q8IYX8 460 aa10.3□□□□□ -0.76
LCA5-203ENST00000467898 COG1Q8WTW3 980 aa10.3□□□□□ -0.76
LCA5-203ENST00000467898 NACC2Q96BF6 587 aa10.3□□□□□ -0.76
LCA5-203ENST00000467898 ZNF570Q96NI8 536 aa10.3□□□□□ -0.76
LCA5-203ENST00000467898 GOLPH3LQ9H4A5 285 aa10.3□□□□□ -0.76
LCA5-203ENST00000467898 EXOC1Q9NV70 894 aa10.3□□□□□ -0.76
LCA5-203ENST00000467898 UBN2Q6ZU65 1347 aa10.3□□□□□ -0.76
LCA5-203ENST00000467898 HEG1Q9ULI3 1381 aa10.3□□□□□ -0.76
LCA5-203ENST00000467898 ABCA3Q99758 1704 aa10.3□□□□□ -0.76
LCA5-203ENST00000467898 ARHGAP6O43182 974 aa10.29□□□□□ -0.76
LCA5-203ENST00000467898 KCNQ3O43525 872 aa10.29□□□□□ -0.76
LCA5-203ENST00000467898 ANP32DO95626 131 aa10.29□□□□□ -0.76
LCA5-203ENST00000467898 TROVE2P10155 538 aaKnown RBP eCLIP10.29□□□□□ -0.76
LCA5-203ENST00000467898 GHRP10912 638 aa10.29□□□□□ -0.76
LCA5-203ENST00000467898 EPB41P11171 864 aaKnown RBP10.29□□□□□ -0.76
LCA5-203ENST00000467898 CCT4P50991 539 aaKnown RBP10.29□□□□□ -0.76
LCA5-203ENST00000467898 STIM1Q13586 685 aa10.29□□□□□ -0.76
LCA5-203ENST00000467898 GALNT17Q6IS24 598 aa10.29□□□□□ -0.76
LCA5-203ENST00000467898 MAATS1Q7Z4T9 603 aa10.29□□□□□ -0.76
LCA5-203ENST00000467898 SMC1BQ8NDV3 1235 aa10.29□□□□□ -0.76
LCA5-203ENST00000467898 WDR66Q8TBY9 1149 aa10.29□□□□□ -0.76
LCA5-203ENST00000467898 OXCT2Q9BYC2 517 aaPredicted RBP10.29□□□□□ -0.76
LCA5-203ENST00000467898 EPN3Q9H201 632 aa10.29□□□□□ -0.76
LCA5-203ENST00000467898 CDC23Q9UJX2 597 aa10.29□□□□□ -0.76
LCA5-203ENST00000467898 SAMM50Q9Y512 469 aa10.29□□□□□ -0.76
LCA5-203ENST00000467898 RNMTO43148 476 aaKnown RBP10.29□□□□□ -0.76
LCA5-203ENST00000467898 KCNA2P16389 499 aa10.29□□□□□ -0.76
LCA5-203ENST00000467898 IBSPP21815 317 aaPredicted RBP10.29□□□□□ -0.76
LCA5-203ENST00000467898 OXCT1P55809 520 aa10.29□□□□□ -0.76
LCA5-203ENST00000467898 VSNL1P62760 191 aa10.29□□□□□ -0.76
LCA5-203ENST00000467898 PIP4K2BP78356 416 aa10.29□□□□□ -0.76
LCA5-203ENST00000467898 SKIDA1Q1XH10 827 aa10.29□□□□□ -0.76
LCA5-203ENST00000467898 RNF187Q5TA31 235 aaPredicted RBP10.29□□□□□ -0.76
LCA5-203ENST00000467898 LMOD2Q6P5Q4 547 aa10.29□□□□□ -0.76
LCA5-203ENST00000467898 ZNF530Q6P9A1 599 aaPredicted RBP10.29□□□□□ -0.76
LCA5-203ENST00000467898 FNBP4Q8N3X1 1017 aaPredicted RBP10.29□□□□□ -0.76
LCA5-203ENST00000467898 TCHPQ9BT92 498 aa10.29□□□□□ -0.76
LCA5-203ENST00000467898 OSBPL1AQ9BXW6 950 aa10.29□□□□□ -0.76
LCA5-203ENST00000467898 C5P01031 1676 aa10.29□□□□□ -0.76
LCA5-203ENST00000467898 KDM4FA0A1W2PPD8 638 aa10.28□□□□□ -0.76
LCA5-203ENST00000467898 HMMRO75330 724 aa10.28□□□□□ -0.76
LCA5-203ENST00000467898 ZNF202O95125 648 aa10.28□□□□□ -0.76
LCA5-203ENST00000467898 GNG11P61952 73 aa10.28□□□□□ -0.76
LCA5-203ENST00000467898 NSUN2Q08J23 767 aaKnown RBP eCLIP10.28□□□□□ -0.76
LCA5-203ENST00000467898 EMC10Q5UCC4 262 aa10.28□□□□□ -0.76
LCA5-203ENST00000467898 NAA35Q5VZE5 725 aa10.28□□□□□ -0.76
LCA5-203ENST00000467898 PACS1Q6VY07 963 aa10.28□□□□□ -0.76
LCA5-203ENST00000467898 LRRC49Q8IUZ0 686 aa10.28□□□□□ -0.76
LCA5-203ENST00000467898 PLEKHM2Q8IWE5 1019 aa10.28□□□□□ -0.76
LCA5-203ENST00000467898 DYDC1Q8WWB3 177 aa10.28□□□□□ -0.76
LCA5-203ENST00000467898 SCAND2PQ9GZW5 306 aaPredicted RBP10.28□□□□□ -0.76
LCA5-203ENST00000467898 PCMTD2Q9NV79 361 aa10.28□□□□□ -0.76
LCA5-203ENST00000467898 C2CD2Q9Y426 696 aa10.28□□□□□ -0.76
LCA5-203ENST00000467898 MEGF6O75095 1541 aa10.28□□□□□ -0.76
LCA5-203ENST00000467898 PRC1O43663 620 aa10.28□□□□□ -0.76
LCA5-203ENST00000467898 HOXB7P09629 217 aa10.28□□□□□ -0.76
LCA5-203ENST00000467898 SMARCA1P28370 1054 aa10.28□□□□□ -0.76
LCA5-203ENST00000467898 MXRA7P84157 204 aa10.28□□□□□ -0.76
LCA5-203ENST00000467898 FAAH2Q6GMR7 532 aa10.28□□□□□ -0.76
LCA5-203ENST00000467898 TAF4BQ92750 862 aa10.28□□□□□ -0.76
LCA5-203ENST00000467898 DHX58Q96C10 678 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms