RNA–Protein interactions for RNA: ENST00000467514.1

PRPF3-203, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 3

Gene PRPF3, Length 1,097 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-203ENST00000467514 HELLSQ9NRZ9 838 aa13.08□□□□□ -0.32
PRPF3-203ENST00000467514 FLRT1Q9NZU1 646 aa13.08□□□□□ -0.32
PRPF3-203ENST00000467514 SIPA1L1O43166 1804 aa13.07□□□□□ -0.32
PRPF3-203ENST00000467514 CDH23Q9H251 3354 aa13.07□□□□□ -0.32
PRPF3-203ENST00000467514 PTPREP23469 700 aa13.07□□□□□ -0.32
PRPF3-203ENST00000467514 SLFNL1Q499Z3 407 aa13.07□□□□□ -0.32
PRPF3-203ENST00000467514 MCMDC2Q4G0Z9 681 aa13.07□□□□□ -0.32
PRPF3-203ENST00000467514 SNX21Q969T3 373 aa13.07□□□□□ -0.32
PRPF3-203ENST00000467514 FAM122AQ96E09 287 aa13.07□□□□□ -0.32
PRPF3-203ENST00000467514 SEC62Q99442 399 aaKnown RBP13.07□□□□□ -0.32
PRPF3-203ENST00000467514 GAS2L1Q99501 681 aaPredicted RBP13.07□□□□□ -0.32
PRPF3-203ENST00000467514 GINM1Q9NU53 330 aa13.07□□□□□ -0.32
PRPF3-203ENST00000467514 SAP30BPQ9UHR5 308 aaKnown RBP13.07□□□□□ -0.32
PRPF3-203ENST00000467514 PALD1Q9ULE6 856 aa13.07□□□□□ -0.32
PRPF3-203ENST00000467514 CDK5RAP2Q96SN8 1893 aa13.06□□□□□ -0.32
PRPF3-203ENST00000467514 TCRBV5S4A2TA0A5A2 114 aa13.06□□□□□ -0.32
PRPF3-203ENST00000467514 RAG1P15918 1043 aa13.06□□□□□ -0.32
PRPF3-203ENST00000467514 ADD2P35612 726 aa13.06□□□□□ -0.32
PRPF3-203ENST00000467514 USP14P54578 494 aa13.06□□□□□ -0.32
PRPF3-203ENST00000467514 RAB3GAP1Q15042 981 aa13.06□□□□□ -0.32
PRPF3-203ENST00000467514 RABEP1Q15276 862 aa13.06□□□□□ -0.32
PRPF3-203ENST00000467514 SHROOM1Q2M3G4 852 aaPredicted RBP13.06□□□□□ -0.32
PRPF3-203ENST00000467514 LRRFIP1Q32MZ4 808 aaKnown RBP13.06□□□□□ -0.32
PRPF3-203ENST00000467514 KIAA1211Q6ZU35 1233 aa13.06□□□□□ -0.32
PRPF3-203ENST00000467514 FOXP4Q8IVH2 680 aaPredicted RBP13.06□□□□□ -0.32
PRPF3-203ENST00000467514 OSBP2Q969R2 916 aa13.06□□□□□ -0.32
PRPF3-203ENST00000467514 PDLIM7Q9NR12 457 aa13.06□□□□□ -0.32
PRPF3-203ENST00000467514 SLC5A4Q9NY91 659 aa13.06□□□□□ -0.32
PRPF3-203ENST00000467514 RAPGEFL1Q9UHV5 662 aa13.06□□□□□ -0.32
PRPF3-203ENST00000467514 FLT1P17948 1338 aa13.06□□□□□ -0.32
PRPF3-203ENST00000467514 GH2P01242 217 aa13.05□□□□□ -0.32
PRPF3-203ENST00000467514 ADCYAP1R1P41586 468 aa13.05□□□□□ -0.32
PRPF3-203ENST00000467514 GRB14Q14449 540 aa13.05□□□□□ -0.32
PRPF3-203ENST00000467514 NECTIN1Q15223 517 aa13.05□□□□□ -0.32
PRPF3-203ENST00000467514 UBE3CQ15386 1083 aa13.05□□□□□ -0.32
PRPF3-203ENST00000467514 NPLOC4Q8TAT6 608 aa13.05□□□□□ -0.32
PRPF3-203ENST00000467514 ZNF384Q8TF68 577 aa13.05□□□□□ -0.32
PRPF3-203ENST00000467514 APPBP2Q92624 585 aa13.05□□□□□ -0.32
PRPF3-203ENST00000467514 EMILIN3Q9NT22 766 aa13.05□□□□□ -0.32
PRPF3-203ENST00000467514 FOCADQ5VW36 1801 aa13.04□□□□□ -0.32
PRPF3-203ENST00000467514 MYH1P12882 1939 aa13.04□□□□□ -0.32
PRPF3-203ENST00000467514 M0R2C6 588 aa13.04□□□□□ -0.32
PRPF3-203ENST00000467514 FOXP2O15409 715 aa13.04□□□□□ -0.32
PRPF3-203ENST00000467514 CYBAP13498 195 aa13.04□□□□□ -0.32
PRPF3-203ENST00000467514 PDE6AP16499 860 aa13.04□□□□□ -0.32
PRPF3-203ENST00000467514 MCCP23508 829 aa13.04□□□□□ -0.32
PRPF3-203ENST00000467514 DNAJB2P25686 324 aa13.04□□□□□ -0.32
PRPF3-203ENST00000467514 ZSCAN25Q6NSZ9 544 aa13.04□□□□□ -0.32
PRPF3-203ENST00000467514 CCDC129Q6ZRS4 1044 aa13.04□□□□□ -0.32
PRPF3-203ENST00000467514 SH3RF1Q7Z6J0 888 aa13.04□□□□□ -0.32
PRPF3-203ENST00000467514 RASEFQ8IZ41 740 aa13.04□□□□□ -0.32
PRPF3-203ENST00000467514 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.04□□□□□ -0.321e-6■■■□□ 17.6
PRPF3-203ENST00000467514 RBM8AQ9Y5S9 174 aaKnown RBP13.04□□□□□ -0.32
PRPF3-203ENST00000467514 SNX14Q9Y5W7 946 aa13.04□□□□□ -0.32
PRPF3-203ENST00000467514 TACC3Q9Y6A5 838 aa13.04□□□□□ -0.32
PRPF3-203ENST00000467514 SEPT4O43236 478 aa13.03□□□□□ -0.32
PRPF3-203ENST00000467514 PQBP1O60828 265 aaKnown RBP13.03□□□□□ -0.32
PRPF3-203ENST00000467514 CNMDO75829 334 aa13.03□□□□□ -0.32
PRPF3-203ENST00000467514 CLTBP09497 229 aa13.03□□□□□ -0.32
PRPF3-203ENST00000467514 HOXC6P09630 235 aa13.03□□□□□ -0.32
PRPF3-203ENST00000467514 VCAM1P19320 739 aa13.03□□□□□ -0.32
PRPF3-203ENST00000467514 ADORA2AP29274 412 aa13.03□□□□□ -0.32
PRPF3-203ENST00000467514 PLA2G5P39877 138 aa13.03□□□□□ -0.32
PRPF3-203ENST00000467514 USP5P45974 858 aa13.03□□□□□ -0.32
PRPF3-203ENST00000467514 JAG1P78504 1218 aa13.03□□□□□ -0.32
PRPF3-203ENST00000467514 TLE2Q04725 743 aa13.03□□□□□ -0.32
PRPF3-203ENST00000467514 FPGSQ05932 587 aa13.03□□□□□ -0.32
PRPF3-203ENST00000467514 PLS1Q14651 629 aa13.03□□□□□ -0.32
PRPF3-203ENST00000467514 GRIN2CQ14957 1233 aa13.03□□□□□ -0.32
PRPF3-203ENST00000467514 SLC9C2Q5TAH2 1124 aa13.03□□□□□ -0.32
PRPF3-203ENST00000467514 SAMD1Q6SPF0 538 aaPredicted RBP13.03□□□□□ -0.32
PRPF3-203ENST00000467514 USP38Q8NB14 1042 aa13.03□□□□□ -0.32
PRPF3-203ENST00000467514 TRPV1Q8NER1 839 aa13.03□□□□□ -0.32
PRPF3-203ENST00000467514 DSCC1Q9BVC3 393 aa13.03□□□□□ -0.32
PRPF3-203ENST00000467514 TANGO6Q9C0B7 1094 aa13.03□□□□□ -0.32
PRPF3-203ENST00000467514 DNAJC18Q9H819 358 aa13.03□□□□□ -0.32
PRPF3-203ENST00000467514 CABP5Q9NP86 173 aa13.03□□□□□ -0.32
PRPF3-203ENST00000467514 THEGQ9P2T0 379 aa13.03□□□□□ -0.32
PRPF3-203ENST00000467514 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.02□□□□□ -0.33
PRPF3-203ENST00000467514 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.02□□□□□ -0.33
PRPF3-203ENST00000467514 TRIM43BA6NCK2 446 aa13.02□□□□□ -0.33
PRPF3-203ENST00000467514 CD2BP2O95400 341 aaKnown RBP13.02□□□□□ -0.33
PRPF3-203ENST00000467514 BECN1Q14457 450 aa13.02□□□□□ -0.33
PRPF3-203ENST00000467514 TSGA10IPQ3SY00 556 aa13.02□□□□□ -0.33
PRPF3-203ENST00000467514 PPP4R3CPQ6ZMV5 832 aa13.02□□□□□ -0.33
PRPF3-203ENST00000467514 CATSPERGQ6ZRH7 1159 aa13.02□□□□□ -0.33
PRPF3-203ENST00000467514 TRIM43Q96BQ3 446 aaPredicted RBP13.02□□□□□ -0.33
PRPF3-203ENST00000467514 TIFAQ96CG3 184 aa13.02□□□□□ -0.33
PRPF3-203ENST00000467514 PUS7LQ9H0K6 701 aaKnown RBP13.02□□□□□ -0.33
PRPF3-203ENST00000467514 ZNF576Q9H609 170 aa13.02□□□□□ -0.33
PRPF3-203ENST00000467514 RPAP3Q9H6T3 665 aaPredicted RBP13.02□□□□□ -0.33
PRPF3-203ENST00000467514 TMEM39AQ9NV64 488 aa13.02□□□□□ -0.33
PRPF3-203ENST00000467514 BTBD7Q9P203 1132 aa13.02□□□□□ -0.33
PRPF3-203ENST00000467514 U3KPZ7 1027 aaPredicted RBP13.02□□□□□ -0.33
PRPF3-203ENST00000467514 MYH7P12883 1935 aa13.01□□□□□ -0.33
PRPF3-203ENST00000467514 SLC27A2O14975 620 aa13.01□□□□□ -0.33
PRPF3-203ENST00000467514 IGSF3O75054 1194 aa13.01□□□□□ -0.33
PRPF3-203ENST00000467514 IDH1O75874 414 aaKnown RBP13.01□□□□□ -0.33
PRPF3-203ENST00000467514 RARBP10826 455 aa13.01□□□□□ -0.33
PRPF3-203ENST00000467514 MAP3K12Q12852 859 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms