RNA–Protein interactions for RNA: ENST00000467213.5

CHD1L-205, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best)

Gene CHD1L, Length 2,782 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-205ENST00000467213 LGALS16A8MUM7 142 aa17.5■□□□□ 0.39
CHD1L-205ENST00000467213 KRT86O43790 486 aa17.5■□□□□ 0.39
CHD1L-205ENST00000467213 NCAPH2Q6IBW4 605 aa17.5■□□□□ 0.39
CHD1L-205ENST00000467213 SPATS2Q86XZ4 545 aaKnown RBP17.5■□□□□ 0.39
CHD1L-205ENST00000467213 ZNF654Q8IZM8 581 aa17.5■□□□□ 0.39
CHD1L-205ENST00000467213 SMARCC1Q92922 1105 aaPredicted RBP17.5■□□□□ 0.39
CHD1L-205ENST00000467213 SH3GL2Q99962 352 aa17.5■□□□□ 0.39
CHD1L-205ENST00000467213 THAP9Q9H5L6 903 aa17.5■□□□□ 0.39
CHD1L-205ENST00000467213 RBM28Q9NW13 759 aaKnown RBP17.5■□□□□ 0.39
CHD1L-205ENST00000467213 FAM184BQ9ULE4 1060 aa17.5■□□□□ 0.39
CHD1L-205ENST00000467213 CTNND2Q9UQB3 1225 aa17.5■□□□□ 0.39
CHD1L-205ENST00000467213 XDHP47989 1333 aa17.5■□□□□ 0.39
CHD1L-205ENST00000467213 GSG1L2A8MUP6 293 aa17.5■□□□□ 0.39
CHD1L-205ENST00000467213 UBE2Q2LH0YL09 131 aa17.5■□□□□ 0.39
CHD1L-205ENST00000467213 FGFR2P21802 821 aa17.5■□□□□ 0.39
CHD1L-205ENST00000467213 TNFRSF8P28908 595 aa17.5■□□□□ 0.39
CHD1L-205ENST00000467213 STX17P56962 302 aa17.5■□□□□ 0.39
CHD1L-205ENST00000467213 MAP3K12Q12852 859 aa17.5■□□□□ 0.39
CHD1L-205ENST00000467213 KLHL10Q6JEL2 608 aa17.5■□□□□ 0.39
CHD1L-205ENST00000467213 FAM76AQ8TAV0 307 aa17.5■□□□□ 0.39
CHD1L-205ENST00000467213 ZNF507Q8TCN5 953 aa17.5■□□□□ 0.39
CHD1L-205ENST00000467213 AENQ8WTP8 325 aaKnown RBP17.5■□□□□ 0.39
CHD1L-205ENST00000467213 EPSTI1Q96J88 318 aa17.5■□□□□ 0.39
CHD1L-205ENST00000467213 SLF1Q9BQI6 1058 aa17.5■□□□□ 0.39
CHD1L-205ENST00000467213 PDS5AQ29RF7 1337 aaKnown RBP17.49■□□□□ 0.39
CHD1L-205ENST00000467213 SHANK3Q9BYB0 1731 aa17.49■□□□□ 0.39
CHD1L-205ENST00000467213 GOLGA8KD6RF30 607 aa17.49■□□□□ 0.39
CHD1L-205ENST00000467213 ABL1P00519 1130 aa17.49■□□□□ 0.39
CHD1L-205ENST00000467213 A1BGP04217 495 aa17.49■□□□□ 0.39
CHD1L-205ENST00000467213 ARL6IP4Q66PJ3 421 aaKnown RBP17.49■□□□□ 0.39
CHD1L-205ENST00000467213 CCDC70Q6NSX1 233 aa17.49■□□□□ 0.39
CHD1L-205ENST00000467213 OXER1Q8TDS5 423 aa17.49■□□□□ 0.39
CHD1L-205ENST00000467213 CRACR2AQ9BSW2 395 aa17.49■□□□□ 0.39
CHD1L-205ENST00000467213 TSGA10Q9BZW7 698 aa17.49■□□□□ 0.39
CHD1L-205ENST00000467213 TACC3Q9Y6A5 838 aa17.49■□□□□ 0.39
CHD1L-205ENST00000467213 SOS2Q07890 1332 aaPredicted RBP17.49■□□□□ 0.39
CHD1L-205ENST00000467213 PCP11498 1178 aaKnown RBP17.49■□□□□ 0.39
CHD1L-205ENST00000467213 FUT2Q10981 343 aa17.49■□□□□ 0.39
CHD1L-205ENST00000467213 KCNB1Q14721 858 aa17.49■□□□□ 0.39
CHD1L-205ENST00000467213 SEC23AQ15436 765 aa17.49■□□□□ 0.39
CHD1L-205ENST00000467213 FIGNQ5HY92 759 aa17.49■□□□□ 0.39
CHD1L-205ENST00000467213 LDHAL6AQ6ZMR3 332 aa17.49■□□□□ 0.39
CHD1L-205ENST00000467213 MB21D1Q8N884 522 aa17.49■□□□□ 0.39
CHD1L-205ENST00000467213 LUC7L2Q9Y383 392 aaKnown RBP17.49■□□□□ 0.39
CHD1L-205ENST00000467213 ANKRD18BA2A2Z9 1011 aa17.48■□□□□ 0.39
CHD1L-205ENST00000467213 RNF225M0QZC1 329 aaPredicted RBP17.48■□□□□ 0.39
CHD1L-205ENST00000467213 AGPSO00116 658 aa17.48■□□□□ 0.39
CHD1L-205ENST00000467213 IDH1O75874 414 aaKnown RBP17.48■□□□□ 0.39
CHD1L-205ENST00000467213 CYLC1P35663 651 aaPredicted RBP17.48■□□□□ 0.39
CHD1L-205ENST00000467213 AFMP43652 599 aa17.48■□□□□ 0.39
CHD1L-205ENST00000467213 ZC3H6P61129 1189 aaKnown RBP17.48■□□□□ 0.39
CHD1L-205ENST00000467213 PKN1Q16512 942 aa17.48■□□□□ 0.39
CHD1L-205ENST00000467213 POTEDQ86YR6 584 aa17.48■□□□□ 0.39
CHD1L-205ENST00000467213 LPIN2Q92539 896 aa17.48■□□□□ 0.39
CHD1L-205ENST00000467213 MMS19Q96T76 1030 aa17.48■□□□□ 0.39
CHD1L-205ENST00000467213 DEF6Q9H4E7 631 aa17.48■□□□□ 0.39
CHD1L-205ENST00000467213 MROH5Q6ZUA9 1318 aa17.48■□□□□ 0.39
CHD1L-205ENST00000467213 CALM1P0DP23 149 aa17.48■□□□□ 0.39
CHD1L-205ENST00000467213 CALM2P0DP24 149 aa17.48■□□□□ 0.39
CHD1L-205ENST00000467213 CALM3P0DP25 149 aa17.48■□□□□ 0.39
CHD1L-205ENST00000467213 HERVK_113P62684 666 aa17.48■□□□□ 0.39
CHD1L-205ENST00000467213 SKOR1P84550 965 aa17.48■□□□□ 0.39
CHD1L-205ENST00000467213 TSR1Q2NL82 804 aaKnown RBP17.48■□□□□ 0.39
CHD1L-205ENST00000467213 EMC10Q5UCC4 262 aa17.48■□□□□ 0.39
CHD1L-205ENST00000467213 RPAINQ86UA6 219 aa17.48■□□□□ 0.39
CHD1L-205ENST00000467213 AKAP17AQ02040 695 aaKnown RBP17.47■□□□□ 0.39
CHD1L-205ENST00000467213 RRAGBQ5VZM2 374 aa17.47■□□□□ 0.39
CHD1L-205ENST00000467213 PAGR1Q9BTK6 254 aa17.47■□□□□ 0.39
CHD1L-205ENST00000467213 A0A1W2PQJ5 194 aa17.47■□□□□ 0.39
CHD1L-205ENST00000467213 ZEB2O60315 1214 aa17.47■□□□□ 0.39
CHD1L-205ENST00000467213 DNM2P50570 870 aa17.47■□□□□ 0.39
CHD1L-205ENST00000467213 NNTQ13423 1086 aa17.47■□□□□ 0.39
CHD1L-205ENST00000467213 PUM3Q15397 648 aaKnown RBP17.47■□□□□ 0.39
CHD1L-205ENST00000467213 ALS2CLQ60I27 953 aa17.47■□□□□ 0.39
CHD1L-205ENST00000467213 NELFBQ8WX92 580 aa17.47■□□□□ 0.39
CHD1L-205ENST00000467213 SELENOOQ9BVL4 669 aa17.47■□□□□ 0.39
CHD1L-205ENST00000467213 TTYH3Q9C0H2 523 aa17.47■□□□□ 0.39
CHD1L-205ENST00000467213 DCCP43146 1447 aa17.47■□□□□ 0.39
CHD1L-205ENST00000467213 OPA1O60313 960 aa17.46■□□□□ 0.39
CHD1L-205ENST00000467213 CCT6AP40227 531 aaKnown RBP17.46■□□□□ 0.39
CHD1L-205ENST00000467213 IRAK1P51617 712 aa17.46■□□□□ 0.39
CHD1L-205ENST00000467213 CHP1Q99653 195 aa17.46■□□□□ 0.39
CHD1L-205ENST00000467213 NCAPGQ9BPX3 1015 aa17.46■□□□□ 0.39
CHD1L-205ENST00000467213 TTC26A0AVF1 554 aa17.46■□□□□ 0.39
CHD1L-205ENST00000467213 SRRM3A6NNA2 597 aaPredicted RBP17.46■□□□□ 0.39
CHD1L-205ENST00000467213 ATP1A1P05023 1023 aaKnown RBP17.46■□□□□ 0.39
CHD1L-205ENST00000467213 ITGA6P23229 1130 aa17.46■□□□□ 0.39
CHD1L-205ENST00000467213 LONP1P36776 959 aaKnown RBP17.46■□□□□ 0.39
CHD1L-205ENST00000467213 GGCXP38435 758 aa17.46■□□□□ 0.39
CHD1L-205ENST00000467213 USP8P40818 1118 aa17.46■□□□□ 0.39
CHD1L-205ENST00000467213 CTSWP56202 376 aa17.46■□□□□ 0.39
CHD1L-205ENST00000467213 UBXN1Q04323 297 aa17.46■□□□□ 0.39
CHD1L-205ENST00000467213 CTDSPL2Q05D32 466 aa17.46■□□□□ 0.39
CHD1L-205ENST00000467213 TTC38Q5R3I4 469 aa17.46■□□□□ 0.39
CHD1L-205ENST00000467213 LMOD2Q6P5Q4 547 aa17.46■□□□□ 0.39
CHD1L-205ENST00000467213 WDR59Q6PJI9 974 aa17.46■□□□□ 0.39
CHD1L-205ENST00000467213 ADSSL1Q8N142 457 aa17.46■□□□□ 0.39
CHD1L-205ENST00000467213 C1orf131Q8NDD1 294 aaKnown RBP17.46■□□□□ 0.39
CHD1L-205ENST00000467213 JAKMIP2Q96AA8 810 aa17.46■□□□□ 0.39
CHD1L-205ENST00000467213 ZNHIT6Q9NWK9 470 aaKnown RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms