RNA–Protein interactions for RNA: ENST00000466763.5

UBA3-209, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-209ENST00000466763 KAT14Q9H8E8 782 aa16.32■□□□□ 0.2
UBA3-209ENST00000466763 PRDM10Q9NQV6 1147 aa16.32■□□□□ 0.2
UBA3-209ENST00000466763 PEX10O60683 326 aa16.31■□□□□ 0.2
UBA3-209ENST00000466763 BMP3P12645 472 aa16.31■□□□□ 0.2
UBA3-209ENST00000466763 SLC1A4P43007 532 aa16.31■□□□□ 0.2
UBA3-209ENST00000466763 SART3Q15020 963 aaKnown RBP16.31■□□□□ 0.2
UBA3-209ENST00000466763 CCDC96Q2M329 555 aa16.31■□□□□ 0.2
UBA3-209ENST00000466763 IFIT1BQ5T764 474 aaKnown RBP16.31■□□□□ 0.2
UBA3-209ENST00000466763 RCSD1Q6JBY9 416 aa16.31■□□□□ 0.2
UBA3-209ENST00000466763 DGKHQ86XP1 1220 aa16.31■□□□□ 0.2
UBA3-209ENST00000466763 RASEFQ8IZ41 740 aa16.31■□□□□ 0.2
UBA3-209ENST00000466763 ENAHQ8N8S7 591 aaPredicted RBP16.31■□□□□ 0.2
UBA3-209ENST00000466763 ERO1AQ96HE7 468 aa16.31■□□□□ 0.2
UBA3-209ENST00000466763 FBXO28Q9NVF7 368 aa16.31■□□□□ 0.2
UBA3-209ENST00000466763 HOXC10Q9NYD6 342 aa16.31■□□□□ 0.2
UBA3-209ENST00000466763 SYNPO2Q9UMS6 1093 aa16.31■□□□□ 0.2
UBA3-209ENST00000466763 PCNTO95613 3336 aa16.31■□□□□ 0.2
UBA3-209ENST00000466763 ADGRA2Q96PE1 1338 aa16.3■□□□□ 0.2
UBA3-209ENST00000466763 PRC1O43663 620 aa16.3■□□□□ 0.2
UBA3-209ENST00000466763 MCM5P33992 734 aa16.3■□□□□ 0.2
UBA3-209ENST00000466763 HSPA4P34932 840 aa16.3■□□□□ 0.2
UBA3-209ENST00000466763 KRT32Q14532 448 aa16.3■□□□□ 0.2
UBA3-209ENST00000466763 WTAPQ15007 396 aa16.3■□□□□ 0.2
UBA3-209ENST00000466763 NOM1Q5C9Z4 860 aaKnown RBP16.3■□□□□ 0.2
UBA3-209ENST00000466763 TMEM67Q5HYA8 995 aa16.3■□□□□ 0.2
UBA3-209ENST00000466763 KCTD1Q719H9 257 aa16.3■□□□□ 0.2
UBA3-209ENST00000466763 MB21D2Q8IYB1 491 aaPredicted RBP16.3■□□□□ 0.2
UBA3-209ENST00000466763 GTF3C2Q8WUA4 911 aaPredicted RBP16.3■□□□□ 0.2
UBA3-209ENST00000466763 NEK1Q96PY6 1258 aa16.3■□□□□ 0.2
UBA3-209ENST00000466763 USP26Q9BXU7 913 aa16.3■□□□□ 0.2
UBA3-209ENST00000466763 CTDP1Q9Y5B0 961 aaPredicted RBP16.3■□□□□ 0.2
UBA3-209ENST00000466763 FRMPD2Q68DX3 1309 aaPredicted RBP16.29■□□□□ 0.2
UBA3-209ENST00000466763 SPDYE16A6NNV3 312 aaPredicted RBP16.29■□□□□ 0.2
UBA3-209ENST00000466763 TMEM232C9JQI7 657 aa16.29■□□□□ 0.2
UBA3-209ENST00000466763 EIF5BO60841 1220 aaKnown RBP16.29■□□□□ 0.2
UBA3-209ENST00000466763 FMNL1O95466 1100 aaPredicted RBP16.29■□□□□ 0.2
UBA3-209ENST00000466763 BCRP11274 1271 aa16.29■□□□□ 0.2
UBA3-209ENST00000466763 NOVP48745 357 aa16.29■□□□□ 0.2
UBA3-209ENST00000466763 PLS1Q14651 629 aa16.29■□□□□ 0.2
UBA3-209ENST00000466763 RASGRP2Q7LDG7 609 aa16.29■□□□□ 0.2
UBA3-209ENST00000466763 CCAR1Q8IX12 1150 aaKnown RBP16.29■□□□□ 0.2
UBA3-209ENST00000466763 PNMA1Q8ND90 353 aa16.29■□□□□ 0.2
UBA3-209ENST00000466763 KIFC2Q96AC6 838 aa16.29■□□□□ 0.2
UBA3-209ENST00000466763 ATG4CQ96DT6 458 aa16.29■□□□□ 0.2
UBA3-209ENST00000466763 GMCL1Q96IK5 515 aa16.29■□□□□ 0.2
UBA3-209ENST00000466763 GPCPD1Q9NPB8 672 aa16.29■□□□□ 0.2
UBA3-209ENST00000466763 RBPJLQ9UBG7 517 aa16.29■□□□□ 0.2
UBA3-209ENST00000466763 SNX14Q9Y5W7 946 aa16.29■□□□□ 0.2
UBA3-209ENST00000466763 ANTXR2P58335 489 aa16.28■□□□□ 0.2
UBA3-209ENST00000466763 LACTBP83111 547 aaPredicted RBP16.28■□□□□ 0.2
UBA3-209ENST00000466763 ARHGEF6Q15052 776 aa16.28■□□□□ 0.2
UBA3-209ENST00000466763 FAM110CQ1W6H9 321 aa16.28■□□□□ 0.2
UBA3-209ENST00000466763 ADCK5Q3MIX3 580 aa16.28■□□□□ 0.2
UBA3-209ENST00000466763 NFXL1Q6ZNB6 911 aa16.28■□□□□ 0.2
UBA3-209ENST00000466763 GPRC5AQ8NFJ5 357 aa16.28■□□□□ 0.2
UBA3-209ENST00000466763 DCAF4Q8WV16 495 aa16.28■□□□□ 0.2
UBA3-209ENST00000466763 JAKMIP1Q96N16 626 aaKnown RBP16.28■□□□□ 0.2
UBA3-209ENST00000466763 SLF1Q9BQI6 1058 aa16.28■□□□□ 0.2
UBA3-209ENST00000466763 LRRC2Q9BYS8 371 aa16.28■□□□□ 0.2
UBA3-209ENST00000466763 CWC22Q9HCG8 908 aaKnown RBP16.28■□□□□ 0.2
UBA3-209ENST00000466763 TXNRD2Q9NNW7 524 aa16.28■□□□□ 0.2
UBA3-209ENST00000466763 FEM1BQ9UK73 627 aa16.28■□□□□ 0.2
UBA3-209ENST00000466763 EPB41L2O43491 1005 aaKnown RBP16.27■□□□□ 0.2
UBA3-209ENST00000466763 PSMC4P43686 418 aa16.27■□□□□ 0.2
UBA3-209ENST00000466763 SLC4A3P48751 1232 aa16.27■□□□□ 0.2
UBA3-209ENST00000466763 ERVK-9P63128 1117 aa16.27■□□□□ 0.2
UBA3-209ENST00000466763 ERVK-24P63145 666 aa16.27■□□□□ 0.2
UBA3-209ENST00000466763 SEC23AQ15436 765 aa16.27■□□□□ 0.2
UBA3-209ENST00000466763 TSGA10IPQ3SY00 556 aa16.27■□□□□ 0.2
UBA3-209ENST00000466763 WDR78Q5VTH9 848 aa16.27■□□□□ 0.2
UBA3-209ENST00000466763 CHURC1Q8WUH1 139 aa16.27■□□□□ 0.2
UBA3-209ENST00000466763 ANKS1AQ92625 1134 aa16.27■□□□□ 0.2
UBA3-209ENST00000466763 ARHGAP39Q9C0H5 1083 aa16.27■□□□□ 0.2
UBA3-209ENST00000466763 EFCC1Q9HA90 598 aa16.27■□□□□ 0.2
UBA3-209ENST00000466763 PPP1R9AQ9ULJ8 1098 aa16.27■□□□□ 0.2
UBA3-209ENST00000466763 RABGAP1Q9Y3P9 1069 aa16.27■□□□□ 0.2
UBA3-209ENST00000466763 TRIM17Q9Y577 477 aa16.27■□□□□ 0.2
UBA3-209ENST00000466763 SEC24BO95487 1268 aa16.26■□□□□ 0.19
UBA3-209ENST00000466763 GOLGA8HP0CJ92 632 aa16.26■□□□□ 0.19
UBA3-209ENST00000466763 PDHBP11177 359 aa16.26■□□□□ 0.19
UBA3-209ENST00000466763 STAT2P52630 851 aa16.26■□□□□ 0.19
UBA3-209ENST00000466763 FCGRTP55899 365 aa16.26■□□□□ 0.19
UBA3-209ENST00000466763 FGD1P98174 961 aa16.26■□□□□ 0.19
UBA3-209ENST00000466763 COL9A3Q14050 684 aaPredicted RBP16.26■□□□□ 0.19
UBA3-209ENST00000466763 Q3C1V9 767 aa16.26■□□□□ 0.19
UBA3-209ENST00000466763 COL13A1Q5TAT6 717 aaPredicted RBP16.26■□□□□ 0.19
UBA3-209ENST00000466763 TTBK2Q6IQ55 1244 aa16.26■□□□□ 0.19
UBA3-209ENST00000466763 CTU1Q7Z7A3 348 aaKnown RBP16.26■□□□□ 0.19
UBA3-209ENST00000466763 FAM160B2Q86V87 743 aa16.26■□□□□ 0.19
UBA3-209ENST00000466763 PRPF38AQ8NAV1 312 aaKnown RBP16.26■□□□□ 0.19
UBA3-209ENST00000466763 KCNB2Q92953 911 aa16.26■□□□□ 0.19
UBA3-209ENST00000466763 TMEM87BQ96K49 555 aa16.26■□□□□ 0.19
UBA3-209ENST00000466763 TCEANC2Q96MN5 208 aa16.26■□□□□ 0.19
UBA3-209ENST00000466763 SENP2Q9HC62 589 aa16.26■□□□□ 0.19
UBA3-209ENST00000466763 GPHNQ9NQX3 736 aaPredicted RBP16.26■□□□□ 0.19
UBA3-209ENST00000466763 BTBD7Q9P203 1132 aa16.26■□□□□ 0.19
UBA3-209ENST00000466763 MORF4L1Q9UBU8 362 aa16.26■□□□□ 0.19
UBA3-209ENST00000466763 MYPNQ86TC9 1320 aa16.25■□□□□ 0.19
UBA3-209ENST00000466763 CCDC69A6NI79 296 aa16.25■□□□□ 0.19
UBA3-209ENST00000466763 ZBED4O75132 1171 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms