RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 FMNL2Q96PY5 1086 aa6.46□□□□□ -1.38
VPS13D-203ENST00000466732 ADAMTS10Q9H324 1103 aa6.46□□□□□ -1.38
VPS13D-203ENST00000466732 TMEM59LQ9UK28 342 aa6.46□□□□□ -1.38
VPS13D-203ENST00000466732 SIGLEC6O43699 453 aa6.45□□□□□ -1.38
VPS13D-203ENST00000466732 PRAMEF1O95521 474 aa6.45□□□□□ -1.38
VPS13D-203ENST00000466732 AFMP43652 599 aa6.45□□□□□ -1.38
VPS13D-203ENST00000466732 AUHQ13825 339 aaKnown RBP6.45□□□□□ -1.38
VPS13D-203ENST00000466732 TDRD10Q5VZ19 366 aaKnown RBP6.45□□□□□ -1.38
VPS13D-203ENST00000466732 PPFIBP1Q86W92 1011 aa6.45□□□□□ -1.38
VPS13D-203ENST00000466732 USHBP1Q8N6Y0 703 aa6.45□□□□□ -1.38
VPS13D-203ENST00000466732 OR6P1Q8NGX9 317 aa6.45□□□□□ -1.38
VPS13D-203ENST00000466732 TCTN2Q96GX1 697 aa6.45□□□□□ -1.38
VPS13D-203ENST00000466732 SHDQ96IW2 340 aa6.45□□□□□ -1.38
VPS13D-203ENST00000466732 FBXL21Q9UKT6 434 aa6.45□□□□□ -1.38
VPS13D-203ENST00000466732 PCDHB12Q9Y5F1 795 aa6.45□□□□□ -1.38
VPS13D-203ENST00000466732 HK2P52789 917 aa6.44□□□□□ -1.38
VPS13D-203ENST00000466732 TEKQ02763 1124 aa6.44□□□□□ -1.38
VPS13D-203ENST00000466732 FYB2Q5VWT5 728 aa6.44□□□□□ -1.38
VPS13D-203ENST00000466732 CCDC144CPQ8IYA2 1237 aa6.44□□□□□ -1.38
VPS13D-203ENST00000466732 ZNF655Q8N720 491 aaPredicted RBP6.44□□□□□ -1.38
VPS13D-203ENST00000466732 CPLX3Q8WVH0 158 aa6.44□□□□□ -1.38
VPS13D-203ENST00000466732 CHST7Q9NS84 486 aa6.44□□□□□ -1.38
VPS13D-203ENST00000466732 GFOD1Q9NXC2 390 aa6.44□□□□□ -1.38
VPS13D-203ENST00000466732 MINPP1Q9UNW1 487 aa6.44□□□□□ -1.38
VPS13D-203ENST00000466732 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.44□□□□□ -1.38
VPS13D-203ENST00000466732 LTBP3Q9NS15 1303 aa6.44□□□□□ -1.38
VPS13D-203ENST00000466732 SHOXO15266 292 aa6.43□□□□□ -1.38
VPS13D-203ENST00000466732 ZGLP1P0C6A0 271 aa6.43□□□□□ -1.38
VPS13D-203ENST00000466732 ATF4P18848 351 aaPredicted RBP6.43□□□□□ -1.38
VPS13D-203ENST00000466732 ERVFC1P60507 584 aa6.43□□□□□ -1.38
VPS13D-203ENST00000466732 RNF111Q6ZNA4 994 aa6.43□□□□□ -1.38
VPS13D-203ENST00000466732 ZSWIM9Q86XI8 627 aa6.43□□□□□ -1.38
VPS13D-203ENST00000466732 C7orf61Q8IZ16 206 aa6.43□□□□□ -1.38
VPS13D-203ENST00000466732 SMARCC1Q92922 1105 aaPredicted RBP6.43□□□□□ -1.38
VPS13D-203ENST00000466732 CAPN10Q9HC96 672 aa6.43□□□□□ -1.38
VPS13D-203ENST00000466732 ZNF214Q9UL59 606 aaPredicted RBP6.43□□□□□ -1.38
VPS13D-203ENST00000466732 A0A1W2PQH9 124 aa6.42□□□□□ -1.38
VPS13D-203ENST00000466732 E9PSI1 815 aa6.42□□□□□ -1.38
VPS13D-203ENST00000466732 HPXP02790 462 aa6.42□□□□□ -1.38
VPS13D-203ENST00000466732 TP53P04637 393 aaPredicted RBP6.42□□□□□ -1.38
VPS13D-203ENST00000466732 KCNMB1Q16558 191 aa6.42□□□□□ -1.38
VPS13D-203ENST00000466732 AXDND1Q5T1B0 1012 aaPredicted RBP6.42□□□□□ -1.38
VPS13D-203ENST00000466732 DCAF15Q66K64 600 aa6.42□□□□□ -1.38
VPS13D-203ENST00000466732 C19orf47Q8N9M1 422 aaKnown RBP6.42□□□□□ -1.38
VPS13D-203ENST00000466732 SYTL4Q96C24 671 aaPredicted RBP6.42□□□□□ -1.38
VPS13D-203ENST00000466732 KIRREL1Q96J84 757 aa6.42□□□□□ -1.38
VPS13D-203ENST00000466732 FOXP3Q9BZS1 431 aa6.42□□□□□ -1.38
VPS13D-203ENST00000466732 IGSF5Q9NSI5 407 aa6.42□□□□□ -1.38
VPS13D-203ENST00000466732 FAM86C1Q9NVL1 165 aa6.42□□□□□ -1.38
VPS13D-203ENST00000466732 PRR13Q9NZ81 148 aa6.42□□□□□ -1.38
VPS13D-203ENST00000466732 STRIP2Q9ULQ0 834 aa6.42□□□□□ -1.38
VPS13D-203ENST00000466732 ZNF281Q9Y2X9 895 aa6.42□□□□□ -1.38
VPS13D-203ENST00000466732 SLC12A7Q9Y666 1083 aa6.42□□□□□ -1.38
VPS13D-203ENST00000466732 SSU72P8A0A1W2PR75 194 aa6.41□□□□□ -1.38
VPS13D-203ENST00000466732 MEIS1O00470 390 aa6.41□□□□□ -1.38
VPS13D-203ENST00000466732 SYPP08247 313 aa6.41□□□□□ -1.38
VPS13D-203ENST00000466732 PCBP3P57721 371 aaKnown RBP6.41□□□□□ -1.38
VPS13D-203ENST00000466732 BBS9Q3SYG4 887 aa6.41□□□□□ -1.38
VPS13D-203ENST00000466732 ANKRD39Q53RE8 183 aa6.41□□□□□ -1.38
VPS13D-203ENST00000466732 FAM169BQ8N8A8 192 aa6.41□□□□□ -1.38
VPS13D-203ENST00000466732 LINC00116Q8NCU8 138 aa6.41□□□□□ -1.38
VPS13D-203ENST00000466732 DHX38Q92620 1227 aaKnown RBP6.41□□□□□ -1.38
VPS13D-203ENST00000466732 SP110Q9HB58 689 aa6.41□□□□□ -1.38
VPS13D-203ENST00000466732 TCFL5Q9UL49 500 aa6.41□□□□□ -1.38
VPS13D-203ENST00000466732 ZNF503-AS2A6NEH8 195 aa6.4□□□□□ -1.38
VPS13D-203ENST00000466732 GLI1P08151 1106 aa6.4□□□□□ -1.38
VPS13D-203ENST00000466732 RAC2P15153 192 aa6.4□□□□□ -1.38
VPS13D-203ENST00000466732 RPL10P27635 214 aaKnown RBP6.4□□□□□ -1.38
VPS13D-203ENST00000466732 TXKP42681 527 aa6.4□□□□□ -1.38
VPS13D-203ENST00000466732 CTSKP43235 329 aa6.4□□□□□ -1.38
VPS13D-203ENST00000466732 CASP7P55210 303 aa6.4□□□□□ -1.38
VPS13D-203ENST00000466732 PPP2R5EQ16537 467 aa6.4□□□□□ -1.38
VPS13D-203ENST00000466732 TMEM67Q5HYA8 995 aa6.4□□□□□ -1.38
VPS13D-203ENST00000466732 VPS37DQ86XT2 251 aa6.4□□□□□ -1.38
VPS13D-203ENST00000466732 PDZD8Q8NEN9 1154 aa6.4□□□□□ -1.38
VPS13D-203ENST00000466732 ABHD4Q8TB40 342 aa6.4□□□□□ -1.38
VPS13D-203ENST00000466732 MYLIPQ8WY64 445 aa6.4□□□□□ -1.38
VPS13D-203ENST00000466732 ANAPC16Q96DE5 110 aa6.4□□□□□ -1.38
VPS13D-203ENST00000466732 TINF2Q9BSI4 451 aa6.4□□□□□ -1.38
VPS13D-203ENST00000466732 G6PC3Q9BUM1 346 aa6.4□□□□□ -1.38
VPS13D-203ENST00000466732 PHAXQ9H814 394 aaKnown RBP6.4□□□□□ -1.38
VPS13D-203ENST00000466732 GP6Q9HCN6 339 aa6.4□□□□□ -1.38
VPS13D-203ENST00000466732 EBF1Q9UH73 591 aa6.4□□□□□ -1.38
VPS13D-203ENST00000466732 TMEM82A0PJX8 343 aa6.39□□□□□ -1.39
VPS13D-203ENST00000466732 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.39□□□□□ -1.39
VPS13D-203ENST00000466732 FKTNO75072 461 aa6.39□□□□□ -1.39
VPS13D-203ENST00000466732 CD247P20963 164 aa6.39□□□□□ -1.39
VPS13D-203ENST00000466732 TRHRP34981 398 aaPredicted RBP6.39□□□□□ -1.39
VPS13D-203ENST00000466732 DUSP4Q13115 394 aa6.39□□□□□ -1.39
VPS13D-203ENST00000466732 GNL2Q13823 731 aaKnown RBP6.39□□□□□ -1.39
VPS13D-203ENST00000466732 GNPTABQ3T906 1256 aa6.39□□□□□ -1.39
VPS13D-203ENST00000466732 OGFOD2Q6N063 350 aa6.39□□□□□ -1.39
VPS13D-203ENST00000466732 WAPLQ7Z5K2 1190 aa6.39□□□□□ -1.39
VPS13D-203ENST00000466732 OXR1Q8N573 874 aa6.39□□□□□ -1.39
VPS13D-203ENST00000466732 LINC01599Q8WXQ3 324 aa6.39□□□□□ -1.39
VPS13D-203ENST00000466732 DSCC1Q9BVC3 393 aa6.39□□□□□ -1.39
VPS13D-203ENST00000466732 PCDHB10Q9UN67 800 aa6.39□□□□□ -1.39
VPS13D-203ENST00000466732 ZNF451Q9Y4E5 1061 aa6.39□□□□□ -1.39
VPS13D-203ENST00000466732 FITM1A5D6W6 292 aa6.38□□□□□ -1.39
VPS13D-203ENST00000466732 CBFA2T2O43439 604 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms