RNA–Protein interactions for RNA: ENST00000466410.5

LIMS2-212, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-212ENST00000466410 TRAPPC10P48553 1259 aa21.94■■□□□ 1.1
LIMS2-212ENST00000466410 PPP2R3AQ06190 1150 aa21.94■■□□□ 1.1
LIMS2-212ENST00000466410 LZTFL1Q9NQ48 299 aa21.94■■□□□ 1.1
LIMS2-212ENST00000466410 CASP14P31944 242 aa21.94■■□□□ 1.1
LIMS2-212ENST00000466410 FILIP1LQ4L180 1135 aa21.94■■□□□ 1.1
LIMS2-212ENST00000466410 RRAGBQ5VZM2 374 aa21.94■■□□□ 1.1
LIMS2-212ENST00000466410 TXNRD3Q86VQ6 643 aa21.94■■□□□ 1.1
LIMS2-212ENST00000466410 ARGLU1Q9NWB6 273 aaPredicted RBP21.94■■□□□ 1.1
LIMS2-212ENST00000466410 TOM1O60784 492 aa21.93■■□□□ 1.1
LIMS2-212ENST00000466410 MFAP3LO75121 409 aa21.93■■□□□ 1.1
LIMS2-212ENST00000466410 CDC25AP30304 524 aa21.93■■□□□ 1.1
LIMS2-212ENST00000466410 TMCO3Q6UWJ1 677 aa21.93■■□□□ 1.1
LIMS2-212ENST00000466410 BARGINQ6ZT62 677 aa21.93■■□□□ 1.1
LIMS2-212ENST00000466410 CCDC12Q8WUD4 166 aaPredicted RBP21.93■■□□□ 1.1
LIMS2-212ENST00000466410 ARPP21Q9UBL0 812 aaPredicted RBP21.93■■□□□ 1.1
LIMS2-212ENST00000466410 GYPCP04921 128 aa21.93■■□□□ 1.1
LIMS2-212ENST00000466410 USP17L8P0C7I0 530 aa21.93■■□□□ 1.1
LIMS2-212ENST00000466410 FXR1P51114 621 aaKnown RBP eCLIP21.93■■□□□ 1.1
LIMS2-212ENST00000466410 FAM98CQ17RN3 349 aaKnown RBP21.93■■□□□ 1.1
LIMS2-212ENST00000466410 SBK1Q52WX2 424 aa21.93■■□□□ 1.1
LIMS2-212ENST00000466410 LAMB1P07942 1786 aa21.92■■□□□ 1.1
LIMS2-212ENST00000466410 KRT31Q15323 416 aa21.92■■□□□ 1.1
LIMS2-212ENST00000466410 GPKOWQ92917 476 aaPredicted RBP eCLIP21.92■■□□□ 1.1
LIMS2-212ENST00000466410 NAA15Q9BXJ9 866 aaKnown RBP21.92■■□□□ 1.1
LIMS2-212ENST00000466410 MCM9Q9NXL9 1143 aa21.92■■□□□ 1.1
LIMS2-212ENST00000466410 PDS5AQ29RF7 1337 aaKnown RBP21.92■■□□□ 1.1
LIMS2-212ENST00000466410 FAM205AQ6ZU69 1335 aa21.92■■□□□ 1.1
LIMS2-212ENST00000466410 GTPBP6O43824 516 aaPredicted RBP21.92■■□□□ 1.1
LIMS2-212ENST00000466410 SEC31AO94979 1220 aaKnown RBP21.92■■□□□ 1.1
LIMS2-212ENST00000466410 TPM1P09493 284 aa21.91■■□□□ 1.1
LIMS2-212ENST00000466410 TEX35Q5T0J7 233 aa21.91■■□□□ 1.1
LIMS2-212ENST00000466410 C4orf32Q8N8J7 132 aa21.91■■□□□ 1.1
LIMS2-212ENST00000466410 NLRP3Q96P20 1036 aa21.91■■□□□ 1.1
LIMS2-212ENST00000466410 SRP68Q9UHB9 627 aaKnown RBP21.91■■□□□ 1.1
LIMS2-212ENST00000466410 KIAA1551Q9HCM1 1747 aa21.91■■□□□ 1.1
LIMS2-212ENST00000466410 PLA2G4AP47712 749 aa21.91■■□□□ 1.1
LIMS2-212ENST00000466410 RSRC2Q7L4I2 434 aaKnown RBP21.91■■□□□ 1.1
LIMS2-212ENST00000466410 STAG2Q8N3U4 1231 aa21.91■■□□□ 1.1
LIMS2-212ENST00000466410 RASGRP4Q8TDF6 673 aa21.91■■□□□ 1.1
LIMS2-212ENST00000466410 KIF5BP33176 963 aa21.9■■□□□ 1.1
LIMS2-212ENST00000466410 TFAP4Q01664 338 aa21.9■■□□□ 1.1
LIMS2-212ENST00000466410 BLIDQ8IZY5 108 aa21.9■■□□□ 1.1
LIMS2-212ENST00000466410 VPS16Q9H269 839 aa21.9■■□□□ 1.1
LIMS2-212ENST00000466410 KAT14Q9H8E8 782 aa21.9■■□□□ 1.1
LIMS2-212ENST00000466410 IL17RBQ9NRM6 502 aa21.9■■□□□ 1.1
LIMS2-212ENST00000466410 LIMA1Q9UHB6 759 aaKnown RBP21.9■■□□□ 1.1
LIMS2-212ENST00000466410 RWDD2AQ9UIY3 292 aa21.9■■□□□ 1.1
LIMS2-212ENST00000466410 MYH8P13535 1937 aa21.9■■□□□ 1.1
LIMS2-212ENST00000466410 N4BP3O15049 544 aa21.9■■□□□ 1.1
LIMS2-212ENST00000466410 C8orf37Q96NL8 207 aa21.9■■□□□ 1.1
LIMS2-212ENST00000466410 MAPK8IP1Q9UQF2 711 aa21.9■■□□□ 1.1
LIMS2-212ENST00000466410 LRRC10BA6NIK2 292 aa21.89■■□□□ 1.09
LIMS2-212ENST00000466410 PAK1Q13153 545 aa21.89■■□□□ 1.09
LIMS2-212ENST00000466410 CNGA4Q8IV77 575 aa21.89■■□□□ 1.09
LIMS2-212ENST00000466410 GPR161Q8N6U8 529 aaKnown RBP21.89■■□□□ 1.09
LIMS2-212ENST00000466410 ANKRD2Q9GZV1 360 aa21.89■■□□□ 1.09
LIMS2-212ENST00000466410 ITIH6Q6UXX5 1313 aa21.89■■□□□ 1.09
LIMS2-212ENST00000466410 RNF225M0QZC1 329 aaPredicted RBP21.89■■□□□ 1.09
LIMS2-212ENST00000466410 CALML3P27482 149 aa21.89■■□□□ 1.09
LIMS2-212ENST00000466410 ZNF658Q5TYW1 1059 aaPredicted RBP21.89■■□□□ 1.09
LIMS2-212ENST00000466410 ARL6IP4Q66PJ3 421 aaKnown RBP21.89■■□□□ 1.09
LIMS2-212ENST00000466410 TYW1BQ6NUM6 668 aa21.89■■□□□ 1.09
LIMS2-212ENST00000466410 RASGRP2Q7LDG7 609 aa21.89■■□□□ 1.09
LIMS2-212ENST00000466410 PTF1AQ7RTS3 328 aa21.89■■□□□ 1.09
LIMS2-212ENST00000466410 NBPF5PQ86XG9 351 aaPredicted RBP21.89■■□□□ 1.09
LIMS2-212ENST00000466410 NELFBQ8WX92 580 aa21.89■■□□□ 1.09
LIMS2-212ENST00000466410 DYNLL2Q96FJ2 89 aa21.89■■□□□ 1.09
LIMS2-212ENST00000466410 PYM1Q9BRP8 204 aaKnown RBP21.89■■□□□ 1.09
LIMS2-212ENST00000466410 TAB2Q9NYJ8 693 aa21.89■■□□□ 1.09
LIMS2-212ENST00000466410 GDAQ9Y2T3 454 aa21.89■■□□□ 1.09
LIMS2-212ENST00000466410 RPN1P04843 607 aaKnown RBP21.88■■□□□ 1.09
LIMS2-212ENST00000466410 DZIP1Q86YF9 867 aaKnown RBP21.88■■□□□ 1.09
LIMS2-212ENST00000466410 CREBRFQ8IUR6 639 aa21.88■■□□□ 1.09
LIMS2-212ENST00000466410 PNMA1Q8ND90 353 aa21.88■■□□□ 1.09
LIMS2-212ENST00000466410 SETDB2Q96T68 719 aa21.88■■□□□ 1.09
LIMS2-212ENST00000466410 LONP1P36776 959 aaKnown RBP21.88■■□□□ 1.09
LIMS2-212ENST00000466410 COPB1P53618 953 aaKnown RBP21.88■■□□□ 1.09
LIMS2-212ENST00000466410 PCDHA4Q9UN74 947 aa21.88■■□□□ 1.09
LIMS2-212ENST00000466410 CCDC88AQ3V6T2 1871 aa21.87■■□□□ 1.09
LIMS2-212ENST00000466410 UBAP1LF5GYI3 381 aa21.87■■□□□ 1.09
LIMS2-212ENST00000466410 SLC51AQ86UW1 340 aa21.87■■□□□ 1.09
LIMS2-212ENST00000466410 NYXQ9GZU5 481 aa21.87■■□□□ 1.09
LIMS2-212ENST00000466410 FECHP22830 423 aa21.87■■□□□ 1.09
LIMS2-212ENST00000466410 STAT6P42226 847 aa21.87■■□□□ 1.09
LIMS2-212ENST00000466410 PRCPP42785 496 aa21.87■■□□□ 1.09
LIMS2-212ENST00000466410 TCP11X2Q5H9J9 407 aa21.87■■□□□ 1.09
LIMS2-212ENST00000466410 C12orf60Q5U649 245 aa21.87■■□□□ 1.09
LIMS2-212ENST00000466410 CCDC51Q96ER9 411 aa21.87■■□□□ 1.09
LIMS2-212ENST00000466410 MKRN1Q9UHC7 482 aaKnown RBP21.87■■□□□ 1.09
LIMS2-212ENST00000466410 KCNJ18B7U540 433 aa21.86■■□□□ 1.09
LIMS2-212ENST00000466410 KIF5CO60282 957 aa21.86■■□□□ 1.09
LIMS2-212ENST00000466410 ERVK-24P63145 666 aa21.86■■□□□ 1.09
LIMS2-212ENST00000466410 KCNJ12Q14500 433 aa21.86■■□□□ 1.09
LIMS2-212ENST00000466410 SLC35G1Q2M3R5 365 aa21.86■■□□□ 1.09
LIMS2-212ENST00000466410 DGKHQ86XP1 1220 aa21.86■■□□□ 1.09
LIMS2-212ENST00000466410 ACRBPQ8NEB7 543 aa21.86■■□□□ 1.09
LIMS2-212ENST00000466410 PARD6BQ9BYG5 372 aa21.86■■□□□ 1.09
LIMS2-212ENST00000466410 ZSWIM4Q9H7M6 989 aa21.86■■□□□ 1.09
LIMS2-212ENST00000466410 PP2D1A8MPX8 630 aa21.86■■□□□ 1.09
LIMS2-212ENST00000466410 ZNF569Q5MCW4 686 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms