RNA–Protein interactions for RNA: ENST00000466141.1

RPUSD3-212, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 996 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-212ENST00000466141 PICALMQ13492 652 aa8.59□□□□□ -1.03
RPUSD3-212ENST00000466141 PI16Q6UXB8 463 aa8.59□□□□□ -1.03
RPUSD3-212ENST00000466141 SMC5Q8IY18 1101 aa8.59□□□□□ -1.03
RPUSD3-212ENST00000466141 WDR66Q8TBY9 1149 aa8.59□□□□□ -1.03
RPUSD3-212ENST00000466141 RHPN1Q8TCX5 695 aa8.59□□□□□ -1.03
RPUSD3-212ENST00000466141 MYLIPQ8WY64 445 aa8.59□□□□□ -1.03
RPUSD3-212ENST00000466141 PBXIP1Q96AQ6 731 aa8.59□□□□□ -1.03
RPUSD3-212ENST00000466141 EAF2Q96CJ1 260 aaPredicted RBP8.59□□□□□ -1.03
RPUSD3-212ENST00000466141 IPO9Q96P70 1041 aaKnown RBP8.59□□□□□ -1.03
RPUSD3-212ENST00000466141 MYCBPQ99417 103 aaPredicted RBP8.59□□□□□ -1.03
RPUSD3-212ENST00000466141 DBNDD2Q9BQY9 259 aa8.59□□□□□ -1.03
RPUSD3-212ENST00000466141 SUDS3Q9H7L9 328 aaPredicted RBP8.59□□□□□ -1.03
RPUSD3-212ENST00000466141 DDX4Q9NQI0 724 aaKnown RBP8.59□□□□□ -1.03
RPUSD3-212ENST00000466141 GNL3LQ9NVN8 582 aaKnown RBP8.59□□□□□ -1.03
RPUSD3-212ENST00000466141 DENND2AQ9ULE3 1009 aa8.59□□□□□ -1.03
RPUSD3-212ENST00000466141 SYNPO2Q9UMS6 1093 aa8.59□□□□□ -1.03
RPUSD3-212ENST00000466141 PCDHB15Q9Y5E8 787 aa8.59□□□□□ -1.03
RPUSD3-212ENST00000466141 NAV1Q8NEY1 1877 aa8.59□□□□□ -1.03
RPUSD3-212ENST00000466141 TTC28Q96AY4 2481 aa8.59□□□□□ -1.03
RPUSD3-212ENST00000466141 LOC285556D6RIA3 1793 aa8.58□□□□□ -1.04
RPUSD3-212ENST00000466141 SH3BP5O60239 455 aa8.58□□□□□ -1.04
RPUSD3-212ENST00000466141 CTNND1O60716 968 aaKnown RBP8.58□□□□□ -1.04
RPUSD3-212ENST00000466141 PEX14O75381 377 aa8.58□□□□□ -1.04
RPUSD3-212ENST00000466141 MAP4K4O95819 1239 aaPredicted RBP8.58□□□□□ -1.04
RPUSD3-212ENST00000466141 LDHBP07195 334 aaKnown RBP8.58□□□□□ -1.04
RPUSD3-212ENST00000466141 CCDC172P0C7W6 258 aa8.58□□□□□ -1.04
RPUSD3-212ENST00000466141 HMGCS2P54868 508 aa8.58□□□□□ -1.04
RPUSD3-212ENST00000466141 CACNB2Q08289 660 aaPredicted RBP8.58□□□□□ -1.04
RPUSD3-212ENST00000466141 SPP2Q13103 211 aa8.58□□□□□ -1.04
RPUSD3-212ENST00000466141 CCL14Q16627 93 aa8.58□□□□□ -1.04
RPUSD3-212ENST00000466141 NAALADL2Q58DX5 795 aa8.58□□□□□ -1.04
RPUSD3-212ENST00000466141 LHX8Q68G74 356 aa8.58□□□□□ -1.04
RPUSD3-212ENST00000466141 KIF1BPQ96EK5 621 aa8.58□□□□□ -1.04
RPUSD3-212ENST00000466141 CALR3Q96L12 384 aaKnown RBP8.58□□□□□ -1.04
RPUSD3-212ENST00000466141 CCDC94Q9BW85 323 aaPredicted RBP8.58□□□□□ -1.04
RPUSD3-212ENST00000466141 ASCC2Q9H1I8 757 aaPredicted RBP8.58□□□□□ -1.04
RPUSD3-212ENST00000466141 SEMA6BQ9H3T3 888 aa8.58□□□□□ -1.04
RPUSD3-212ENST00000466141 HMG20BQ9P0W2 317 aa8.58□□□□□ -1.04
RPUSD3-212ENST00000466141 ABCF2Q9UG63 623 aa8.58□□□□□ -1.04
RPUSD3-212ENST00000466141 PNMA3Q9UL41 463 aa8.58□□□□□ -1.04
RPUSD3-212ENST00000466141 MYH1P12882 1939 aa8.58□□□□□ -1.04
RPUSD3-212ENST00000466141 ATAD5Q96QE3 1844 aa8.57□□□□□ -1.04
RPUSD3-212ENST00000466141 LAMA2P24043 3122 aaKnown RBP8.57□□□□□ -1.04
RPUSD3-212ENST00000466141 CDH23Q9H251 3354 aa8.57□□□□□ -1.04
RPUSD3-212ENST00000466141 KIF1CO43896 1103 aaKnown RBP8.57□□□□□ -1.04
RPUSD3-212ENST00000466141 ENTPD3O75355 529 aa8.57□□□□□ -1.04
RPUSD3-212ENST00000466141 KIF4AO95239 1232 aa8.57□□□□□ -1.04
RPUSD3-212ENST00000466141 ZNF16P17020 682 aaPredicted RBP8.57□□□□□ -1.04
RPUSD3-212ENST00000466141 ZKSCAN1P17029 563 aaPredicted RBP8.57□□□□□ -1.04
RPUSD3-212ENST00000466141 PLA2G5P39877 138 aa8.57□□□□□ -1.04
RPUSD3-212ENST00000466141 PEX19P40855 299 aa8.57□□□□□ -1.04
RPUSD3-212ENST00000466141 GCLCP48506 637 aaPredicted RBP8.57□□□□□ -1.04
RPUSD3-212ENST00000466141 ATN1P54259 1190 aaPredicted RBP8.57□□□□□ -1.04
RPUSD3-212ENST00000466141 MAP3K10Q02779 954 aa8.57□□□□□ -1.04
RPUSD3-212ENST00000466141 RRP1BQ14684 758 aaKnown RBP8.57□□□□□ -1.04
RPUSD3-212ENST00000466141 SHHQ15465 462 aa8.57□□□□□ -1.04
RPUSD3-212ENST00000466141 CDC37Q16543 378 aaPredicted RBP8.57□□□□□ -1.04
RPUSD3-212ENST00000466141 C9orf50Q5SZB4 431 aa8.57□□□□□ -1.04
RPUSD3-212ENST00000466141 PROCA1Q8NCQ7 364 aaPredicted RBP8.57□□□□□ -1.04
RPUSD3-212ENST00000466141 ATL2Q8NHH9 583 aa8.57□□□□□ -1.04
RPUSD3-212ENST00000466141 ZNF512BQ96KM6 892 aaPredicted RBP8.57□□□□□ -1.04
RPUSD3-212ENST00000466141 NEUROD6Q96NK8 337 aa8.57□□□□□ -1.04
RPUSD3-212ENST00000466141 LBHD1Q9BQE6 289 aaPredicted RBP8.57□□□□□ -1.04
RPUSD3-212ENST00000466141 IDI2Q9BXS1 227 aa8.57□□□□□ -1.04
RPUSD3-212ENST00000466141 TTYH1Q9H313 450 aaPredicted RBP8.57□□□□□ -1.04
RPUSD3-212ENST00000466141 TXNRD2Q9NNW7 524 aa8.57□□□□□ -1.04
RPUSD3-212ENST00000466141 IL1RAPL2Q9NP60 686 aa8.57□□□□□ -1.04
RPUSD3-212ENST00000466141 SMC3Q9UQE7 1217 aa8.57□□□□□ -1.04
RPUSD3-212ENST00000466141 PRUNE2Q8WUY3 3088 aa8.57□□□□□ -1.04
RPUSD3-212ENST00000466141 LTBP2Q14767 1821 aa8.57□□□□□ -1.04
RPUSD3-212ENST00000466141 GAKO14976 1311 aa8.56□□□□□ -1.04
RPUSD3-212ENST00000466141 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.56□□□□□ -1.04
RPUSD3-212ENST00000466141 MPHOSPH10O00566 681 aaKnown RBP8.56□□□□□ -1.04
RPUSD3-212ENST00000466141 CREB3O43889 395 aa8.56□□□□□ -1.04
RPUSD3-212ENST00000466141 COQ9O75208 318 aa8.56□□□□□ -1.04
RPUSD3-212ENST00000466141 UQCRFS1P1P0C7P4 283 aa8.56□□□□□ -1.04
RPUSD3-212ENST00000466141 FOSL2P15408 326 aa8.56□□□□□ -1.04
RPUSD3-212ENST00000466141 COPB2P35606 906 aa8.56□□□□□ -1.04
RPUSD3-212ENST00000466141 PUS10Q3MIT2 529 aaKnown RBP8.56□□□□□ -1.04
RPUSD3-212ENST00000466141 DNAJC14Q6Y2X3 702 aaPredicted RBP8.56□□□□□ -1.04
RPUSD3-212ENST00000466141 DPH6Q7L8W6 267 aa8.56□□□□□ -1.04
RPUSD3-212ENST00000466141 RPAINQ86UA6 219 aa8.56□□□□□ -1.04
RPUSD3-212ENST00000466141 AACSQ86V21 672 aa8.56□□□□□ -1.04
RPUSD3-212ENST00000466141 CREBRFQ8IUR6 639 aa8.56□□□□□ -1.04
RPUSD3-212ENST00000466141 PARP9Q8IXQ6 854 aa8.56□□□□□ -1.04
RPUSD3-212ENST00000466141 ZGPATQ8N5A5 531 aaKnown RBP8.56□□□□□ -1.04
RPUSD3-212ENST00000466141 SPATA5Q8NB90 893 aa8.56□□□□□ -1.04
RPUSD3-212ENST00000466141 ZNF280CQ8ND82 737 aa8.56□□□□□ -1.04
RPUSD3-212ENST00000466141 MNS1Q8NEH6 495 aa8.56□□□□□ -1.04
RPUSD3-212ENST00000466141 ZNF384Q8TF68 577 aa8.56□□□□□ -1.04
RPUSD3-212ENST00000466141 EVI5LQ96CN4 794 aa8.56□□□□□ -1.04
RPUSD3-212ENST00000466141 SENP6Q9GZR1 1112 aaPredicted RBP8.56□□□□□ -1.04
RPUSD3-212ENST00000466141 CCDC8Q9H0W5 538 aaPredicted RBP8.56□□□□□ -1.04
RPUSD3-212ENST00000466141 DCTPP1Q9H773 170 aa8.56□□□□□ -1.04
RPUSD3-212ENST00000466141 ARHGEF10LQ9HCE6 1279 aa8.56□□□□□ -1.04
RPUSD3-212ENST00000466141 MORF4L1Q9UBU8 362 aa8.56□□□□□ -1.04
RPUSD3-212ENST00000466141 FRMPD3Q5JV73 1810 aa8.56□□□□□ -1.04
RPUSD3-212ENST00000466141 MYH8P13535 1937 aa8.55□□□□□ -1.04
RPUSD3-212ENST00000466141 CARNS1A5YM72 827 aa8.55□□□□□ -1.04
RPUSD3-212ENST00000466141 BTDP43251 543 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms