RNA–Protein interactions for RNA: ENST00000465980.1

ATG3-203, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-203ENST00000465980 ADGRA1Q86SQ6 560 aa11.37□□□□□ -0.59
ATG3-203ENST00000465980 CLASRPQ8N2M8 674 aaKnown RBP11.37□□□□□ -0.59
ATG3-203ENST00000465980 EAF2Q96CJ1 260 aaPredicted RBP11.37□□□□□ -0.59
ATG3-203ENST00000465980 OSBPL5Q9H0X9 879 aaPredicted RBP11.37□□□□□ -0.59
ATG3-203ENST00000465980 OSBPL3Q9H4L5 887 aa11.37□□□□□ -0.59
ATG3-203ENST00000465980 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.37□□□□□ -0.59
ATG3-203ENST00000465980 FAM217BQ9NTX9 383 aaPredicted RBP11.37□□□□□ -0.59
ATG3-203ENST00000465980 CXCL11O14625 94 aa11.36□□□□□ -0.59
ATG3-203ENST00000465980 CTNND1O60716 968 aaKnown RBP11.36□□□□□ -0.59
ATG3-203ENST00000465980 IDH1O75874 414 aaKnown RBP11.36□□□□□ -0.59
ATG3-203ENST00000465980 CYP2C8P10632 490 aa11.36□□□□□ -0.59
ATG3-203ENST00000465980 SKOR1P84550 965 aa11.36□□□□□ -0.59
ATG3-203ENST00000465980 NFX1Q12986 1120 aaKnown RBP11.36□□□□□ -0.59
ATG3-203ENST00000465980 ARHGEF6Q15052 776 aa11.36□□□□□ -0.59
ATG3-203ENST00000465980 SLC4A8Q2Y0W8 1093 aa11.36□□□□□ -0.59
ATG3-203ENST00000465980 SLC9C1Q4G0N8 1177 aa11.36□□□□□ -0.59
ATG3-203ENST00000465980 AACSQ86V21 672 aa11.36□□□□□ -0.59
ATG3-203ENST00000465980 MAPKAPK5Q8IW41 473 aa11.36□□□□□ -0.59
ATG3-203ENST00000465980 OTUD7AQ8TE49 926 aaPredicted RBP11.36□□□□□ -0.59
ATG3-203ENST00000465980 STAP2Q9UGK3 403 aa11.36□□□□□ -0.59
ATG3-203ENST00000465980 BAZ2AQ9UIF9 1905 aaKnown RBP11.36□□□□□ -0.59
ATG3-203ENST00000465980 COL2A1P02458 1487 aaPredicted RBP11.36□□□□□ -0.59
ATG3-203ENST00000465980 A0A0G2JLL6 359 aaPredicted RBP11.35□□□□□ -0.59
ATG3-203ENST00000465980 BAG3O95817 575 aa11.35□□□□□ -0.59
ATG3-203ENST00000465980 CYP7A1P22680 504 aa11.35□□□□□ -0.59
ATG3-203ENST00000465980 PDE1AP54750 535 aa11.35□□□□□ -0.59
ATG3-203ENST00000465980 DYNLL1P63167 89 aaKnown RBP11.35□□□□□ -0.59
ATG3-203ENST00000465980 MAP3K10Q02779 954 aa11.35□□□□□ -0.59
ATG3-203ENST00000465980 GPAT2Q6NUI2 795 aa11.35□□□□□ -0.59
ATG3-203ENST00000465980 C17orf99Q6UX52 265 aa11.35□□□□□ -0.59
ATG3-203ENST00000465980 PRRT2Q7Z6L0 340 aaPredicted RBP11.35□□□□□ -0.59
ATG3-203ENST00000465980 RETREG3Q86VR2 466 aa11.35□□□□□ -0.59
ATG3-203ENST00000465980 SH3TC2Q8TF17 1288 aa11.35□□□□□ -0.59
ATG3-203ENST00000465980 TGFBRAP1Q8WUH2 860 aa11.35□□□□□ -0.59
ATG3-203ENST00000465980 ARMC5Q96C12 935 aa11.35□□□□□ -0.59
ATG3-203ENST00000465980 TRIM47Q96LD4 638 aa11.35□□□□□ -0.59
ATG3-203ENST00000465980 PARK7Q99497 189 aaKnown RBP11.35□□□□□ -0.59
ATG3-203ENST00000465980 SAP30BPQ9UHR5 308 aaKnown RBP11.35□□□□□ -0.59
ATG3-203ENST00000465980 AFG3L2Q9Y4W6 797 aa11.35□□□□□ -0.59
ATG3-203ENST00000465980 ADGRA2Q96PE1 1338 aa11.35□□□□□ -0.59
ATG3-203ENST00000465980 MAP4K4O95819 1239 aaPredicted RBP11.34□□□□□ -0.59
ATG3-203ENST00000465980 IFIT2P09913 472 aaKnown RBP11.34□□□□□ -0.59
ATG3-203ENST00000465980 MX1P20591 662 aa11.34□□□□□ -0.59
ATG3-203ENST00000465980 CTGFP29279 349 aa11.34□□□□□ -0.59
ATG3-203ENST00000465980 PSMC4P43686 418 aa11.34□□□□□ -0.59
ATG3-203ENST00000465980 RRP1BQ14684 758 aaKnown RBP11.34□□□□□ -0.59
ATG3-203ENST00000465980 BMP2KLQ5H9B9 411 aa11.34□□□□□ -0.59
ATG3-203ENST00000465980 MIGA1Q8NAN2 632 aa11.34□□□□□ -0.59
ATG3-203ENST00000465980 KIFC2Q96AC6 838 aa11.34□□□□□ -0.59
ATG3-203ENST00000465980 FLT1P17948 1338 aa11.34□□□□□ -0.59
ATG3-203ENST00000465980 DDX60LQ5H9U9 1706 aaKnown RBP11.33□□□□□ -0.6
ATG3-203ENST00000465980 WIPF1O43516 503 aa11.33□□□□□ -0.6
ATG3-203ENST00000465980 EN2P19622 333 aaPredicted RBP11.33□□□□□ -0.6
ATG3-203ENST00000465980 GUCA2AQ02747 115 aa11.33□□□□□ -0.6
ATG3-203ENST00000465980 TTC22Q5TAA0 569 aa11.33□□□□□ -0.6
ATG3-203ENST00000465980 FASTKD5Q7L8L6 764 aaKnown RBP11.33□□□□□ -0.6
ATG3-203ENST00000465980 MAGEB6Q8N7X4 407 aa11.33□□□□□ -0.6
ATG3-203ENST00000465980 HPS1Q92902 700 aa11.33□□□□□ -0.6
ATG3-203ENST00000465980 ZNF333Q96JL9 665 aa11.33□□□□□ -0.6
ATG3-203ENST00000465980 ZNF512BQ96KM6 892 aaPredicted RBP11.33□□□□□ -0.6
ATG3-203ENST00000465980 TRIM34Q9BYJ4 488 aa11.33□□□□□ -0.6
ATG3-203ENST00000465980 ANTXR1Q9H6X2 564 aa11.33□□□□□ -0.6
ATG3-203ENST00000465980 PALD1Q9ULE6 856 aa11.33□□□□□ -0.6
ATG3-203ENST00000465980 TTC41PQ6P2S7 1318 aa11.33□□□□□ -0.6
ATG3-203ENST00000465980 TRIOBPQ9H2D6 2365 aa11.32□□□□□ -0.6
ATG3-203ENST00000465980 CAP2P40123 477 aa11.32□□□□□ -0.6
ATG3-203ENST00000465980 HMGCS2P54868 508 aa11.32□□□□□ -0.6
ATG3-203ENST00000465980 SPP2Q13103 211 aa11.32□□□□□ -0.6
ATG3-203ENST00000465980 SHROOM1Q2M3G4 852 aaPredicted RBP11.32□□□□□ -0.6
ATG3-203ENST00000465980 TREML2Q5T2D2 321 aa11.32□□□□□ -0.6
ATG3-203ENST00000465980 NBPF11Q86T75 865 aa11.32□□□□□ -0.6
ATG3-203ENST00000465980 CRACR2BQ8N4Y2 399 aaPredicted RBP11.32□□□□□ -0.6
ATG3-203ENST00000465980 SMCR8Q8TEV9 937 aaPredicted RBP11.32□□□□□ -0.6
ATG3-203ENST00000465980 PI4KBQ9UBF8 816 aa11.32□□□□□ -0.6
ATG3-203ENST00000465980 MYPNQ86TC9 1320 aa11.32□□□□□ -0.6
ATG3-203ENST00000465980 GDF11O95390 407 aa11.31□□□□□ -0.6
ATG3-203ENST00000465980 BCRP11274 1271 aa11.31□□□□□ -0.6
ATG3-203ENST00000465980 GSPT1P15170 499 aaKnown RBP11.31□□□□□ -0.6
ATG3-203ENST00000465980 C8orf34Q49A92 452 aa11.31□□□□□ -0.6
ATG3-203ENST00000465980 PI4K2BQ8TCG2 481 aa11.31□□□□□ -0.6
ATG3-203ENST00000465980 RAET1EQ8TD07 263 aa11.31□□□□□ -0.6
ATG3-203ENST00000465980 GPATCH3Q96I76 525 aa11.31□□□□□ -0.6
ATG3-203ENST00000465980 DNAJC2Q99543 621 aaKnown RBP11.31□□□□□ -0.6
ATG3-203ENST00000465980 NUDT12Q9BQG2 462 aa11.31□□□□□ -0.6
ATG3-203ENST00000465980 BACH2Q9BYV9 841 aa11.31□□□□□ -0.6
ATG3-203ENST00000465980 DHX36Q9H2U1 1008 aaKnown RBP11.31□□□□□ -0.6
ATG3-203ENST00000465980 DNAJC18Q9H819 358 aa11.31□□□□□ -0.6
ATG3-203ENST00000465980 ECHDC1Q9NTX5 307 aa11.31□□□□□ -0.6
ATG3-203ENST00000465980 SRRDQ9UH36 339 aa11.31□□□□□ -0.6
ATG3-203ENST00000465980 HERC5Q9UII4 1024 aaKnown RBP11.31□□□□□ -0.6
ATG3-203ENST00000465980 AGTPBP1Q9UPW5 1226 aa11.31□□□□□ -0.6
ATG3-203ENST00000465980 USP17L5A8MUK1 530 aa11.3□□□□□ -0.6
ATG3-203ENST00000465980 ERC2O15083 957 aa11.3□□□□□ -0.6
ATG3-203ENST00000465980 GLRX3O76003 335 aaKnown RBP11.3□□□□□ -0.6
ATG3-203ENST00000465980 HLA-DOAP06340 250 aa11.3□□□□□ -0.6
ATG3-203ENST00000465980 USP5P45974 858 aa11.3□□□□□ -0.6
ATG3-203ENST00000465980 FCGRTP55899 365 aa11.3□□□□□ -0.6
ATG3-203ENST00000465980 JAG1P78504 1218 aa11.3□□□□□ -0.6
ATG3-203ENST00000465980 PRKCZQ05513 592 aa11.3□□□□□ -0.6
ATG3-203ENST00000465980 MAP3K12Q12852 859 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms