RNA–Protein interactions for RNA: ENST00000465871.1

SSB-207, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 421 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-207ENST00000465871 TNFRSF10CO14798 259 aa9.47□□□□□ -0.89
SSB-207ENST00000465871 RAP1GAPP47736 663 aa9.47□□□□□ -0.89
SSB-207ENST00000465871 CHRNEQ04844 493 aa9.47□□□□□ -0.89
SSB-207ENST00000465871 TIGD5Q53EQ6 642 aa9.47□□□□□ -0.89
SSB-207ENST00000465871 TMC3Q7Z5M5 1100 aa9.47□□□□□ -0.89
SSB-207ENST00000465871 USP48Q86UV5 1035 aa9.47□□□□□ -0.89
SSB-207ENST00000465871 ZNF655Q8N720 491 aaPredicted RBP9.47□□□□□ -0.89
SSB-207ENST00000465871 ANKS4BQ8N8V4 417 aa9.47□□□□□ -0.89
SSB-207ENST00000465871 ANTXR1Q9H6X2 564 aa9.47□□□□□ -0.89
SSB-207ENST00000465871 DCP1AQ9NPI6 582 aaPredicted RBP9.47□□□□□ -0.89
SSB-207ENST00000465871 ZNF281Q9Y2X9 895 aa9.47□□□□□ -0.89
SSB-207ENST00000465871 KRTAP4-8A0A0G2JLE6 195 aa9.46□□□□□ -0.9
SSB-207ENST00000465871 SNW1Q13573 536 aaKnown RBP9.46□□□□□ -0.9
SSB-207ENST00000465871 SPPL2CQ8IUH8 684 aa9.46□□□□□ -0.9
SSB-207ENST00000465871 TCTN2Q96GX1 697 aa9.46□□□□□ -0.9
SSB-207ENST00000465871 EBF1Q9UH73 591 aa9.46□□□□□ -0.9
SSB-207ENST00000465871 USHBP1Q8N6Y0 703 aa9.45□□□□□ -0.9
SSB-207ENST00000465871 LINC01599Q8WXQ3 324 aa9.45□□□□□ -0.9
SSB-207ENST00000465871 ZNF512BQ96KM6 892 aaPredicted RBP9.45□□□□□ -0.9
SSB-207ENST00000465871 CWC22Q9HCG8 908 aaKnown RBP9.45□□□□□ -0.9
SSB-207ENST00000465871 CILP2Q8IUL8 1156 aa9.44□□□□□ -0.9
SSB-207ENST00000465871 SLC6A18Q96N87 628 aa9.44□□□□□ -0.9
SSB-207ENST00000465871 G6PC3Q9BUM1 346 aa9.44□□□□□ -0.9
SSB-207ENST00000465871 FOXP3Q9BZS1 431 aa9.44□□□□□ -0.9
SSB-207ENST00000465871 SLC6A17Q9H1V8 727 aa9.44□□□□□ -0.9
SSB-207ENST00000465871 TCFL5Q9UL49 500 aa9.44□□□□□ -0.9
SSB-207ENST00000465871 ZNRF3Q9ULT6 936 aa9.44□□□□□ -0.9
SSB-207ENST00000465871 SIGLEC6O43699 453 aa9.43□□□□□ -0.9
SSB-207ENST00000465871 PRAMEF1O95521 474 aa9.43□□□□□ -0.9
SSB-207ENST00000465871 KRT1P04264 644 aa9.43□□□□□ -0.9
SSB-207ENST00000465871 RPL10P27635 214 aaKnown RBP9.43□□□□□ -0.9
SSB-207ENST00000465871 PCBP3P57721 371 aaKnown RBP9.43□□□□□ -0.9
SSB-207ENST00000465871 ZNF394Q53GI3 561 aa9.43□□□□□ -0.9
SSB-207ENST00000465871 IRF2BP1Q8IU81 584 aa9.43□□□□□ -0.9
SSB-207ENST00000465871 TMEM192Q8IY95 271 aa9.43□□□□□ -0.9
SSB-207ENST00000465871 PRDM14Q9GZV8 571 aa9.43□□□□□ -0.9
SSB-207ENST00000465871 MKRN2Q9H000 416 aaKnown RBP9.43□□□□□ -0.9
SSB-207ENST00000465871 PCDHGB7Q9Y5F8 929 aa9.43□□□□□ -0.9
SSB-207ENST00000465871 NFIBO00712 420 aa9.42□□□□□ -0.9
SSB-207ENST00000465871 IMPDH2P12268 514 aa9.42□□□□□ -0.9
SSB-207ENST00000465871 SNX17Q15036 470 aa9.42□□□□□ -0.9
SSB-207ENST00000465871 WAPLQ7Z5K2 1190 aa9.42□□□□□ -0.9
SSB-207ENST00000465871 LINC00116Q8NCU8 138 aa9.42□□□□□ -0.9
SSB-207ENST00000465871 TOX2Q96NM4 488 aa9.42□□□□□ -0.9
SSB-207ENST00000465871 SLC9A7Q96T83 725 aa9.42□□□□□ -0.9
SSB-207ENST00000465871 GPR160Q9UJ42 338 aa9.42□□□□□ -0.9
SSB-207ENST00000465871 YBX2Q9Y2T7 364 aaKnown RBP9.42□□□□□ -0.9
SSB-207ENST00000465871 SSU72P8A0A1W2PR75 194 aa9.41□□□□□ -0.9
SSB-207ENST00000465871 C1QTNF9P0C862 333 aa9.41□□□□□ -0.9
SSB-207ENST00000465871 BBS9Q3SYG4 887 aa9.41□□□□□ -0.9
SSB-207ENST00000465871 RNF34Q969K3 372 aa9.41□□□□□ -0.9
SSB-207ENST00000465871 INTS4Q96HW7 963 aaKnown RBP9.41□□□□□ -0.9
SSB-207ENST00000465871 SLC26A8Q96RN1 970 aa9.41□□□□□ -0.9
SSB-207ENST00000465871 KCNK12Q9HB15 430 aa9.41□□□□□ -0.9
SSB-207ENST00000465871 TMEM82A0PJX8 343 aa9.4□□□□□ -0.9
SSB-207ENST00000465871 RECKO95980 971 aa9.4□□□□□ -0.9
SSB-207ENST00000465871 SYPP08247 313 aa9.4□□□□□ -0.9
SSB-207ENST00000465871 ANKLE2Q86XL3 938 aa9.4□□□□□ -0.9
SSB-207ENST00000465871 MAP6Q96JE9 813 aa9.4□□□□□ -0.9
SSB-207ENST00000465871 CHST7Q9NS84 486 aa9.4□□□□□ -0.9
SSB-207ENST00000465871 ZMYM5Q9UJ78 669 aa9.4□□□□□ -0.9
SSB-207ENST00000465871 PCDHB12Q9Y5F1 795 aa9.4□□□□□ -0.9
SSB-207ENST00000465871 PSPNO60542 156 aa9.39□□□□□ -0.91
SSB-207ENST00000465871 USP2O75604 605 aaPredicted RBP9.39□□□□□ -0.91
SSB-207ENST00000465871 TMEM253P0C7T8 217 aa9.39□□□□□ -0.91
SSB-207ENST00000465871 MED14OSP0DP75 135 aa9.39□□□□□ -0.91
SSB-207ENST00000465871 VAMP1P23763 118 aa9.39□□□□□ -0.91
SSB-207ENST00000465871 KIR2DL1P43626 348 aaPredicted RBP9.39□□□□□ -0.91
SSB-207ENST00000465871 KIR2DL2P43627 348 aaPredicted RBP9.39□□□□□ -0.91
SSB-207ENST00000465871 KRTAP19-4Q3LI73 84 aa9.39□□□□□ -0.91
SSB-207ENST00000465871 INTS3Q68E01 1043 aaKnown RBP9.39□□□□□ -0.91
SSB-207ENST00000465871 TAB3Q8N5C8 712 aaPredicted RBP9.39□□□□□ -0.91
SSB-207ENST00000465871 SHISA4Q96DD7 197 aa9.39□□□□□ -0.91
SSB-207ENST00000465871 FERD3LQ96RJ6 166 aa9.39□□□□□ -0.91
SSB-207ENST00000465871 NOTOA8MTQ0 251 aa9.38□□□□□ -0.91
SSB-207ENST00000465871 FKTNO75072 461 aa9.38□□□□□ -0.91
SSB-207ENST00000465871 ACRP10323 421 aa9.38□□□□□ -0.91
SSB-207ENST00000465871 GLDCP23378 1020 aa9.38□□□□□ -0.91
SSB-207ENST00000465871 SPOCD1Q6ZMY3 1216 aa9.38□□□□□ -0.91
SSB-207ENST00000465871 DHRS1Q96LJ7 313 aa9.38□□□□□ -0.91
SSB-207ENST00000465871 PRR13Q9NZ81 148 aa9.38□□□□□ -0.91
SSB-207ENST00000465871 SUCOQ9UBS9 1254 aaKnown RBP9.38□□□□□ -0.91
SSB-207ENST00000465871 DDX41Q9UJV9 622 aaKnown RBP9.38□□□□□ -0.91
SSB-207ENST00000465871 MINPP1Q9UNW1 487 aa9.38□□□□□ -0.91
SSB-207ENST00000465871 RACK1P63244 317 aaKnown RBP9.37□□□□□ -0.91
SSB-207ENST00000465871 AUHQ13825 339 aaKnown RBP9.37□□□□□ -0.91
SSB-207ENST00000465871 TM9SF2Q99805 663 aa9.37□□□□□ -0.91
SSB-207ENST00000465871 CD320Q9NPF0 282 aa9.37□□□□□ -0.91
SSB-207ENST00000465871 GFOD1Q9NXC2 390 aa9.37□□□□□ -0.91
SSB-207ENST00000465871 FBXL21Q9UKT6 434 aa9.37□□□□□ -0.91
SSB-207ENST00000465871 FAM86C2PA6NEL3 165 aa9.36□□□□□ -0.91
SSB-207ENST00000465871 ETV2O00321 342 aaPredicted RBP9.36□□□□□ -0.91
SSB-207ENST00000465871 SCAMP3O14828 347 aaKnown RBP9.36□□□□□ -0.91
SSB-207ENST00000465871 CFPP27918 469 aa9.36□□□□□ -0.91
SSB-207ENST00000465871 NLRX1Q86UT6 975 aa9.36□□□□□ -0.91
SSB-207ENST00000465871 C1QL4Q86Z23 238 aa9.36□□□□□ -0.91
SSB-207ENST00000465871 LRRC56Q8IYG6 542 aaPredicted RBP9.36□□□□□ -0.91
SSB-207ENST00000465871 ZSCAN18Q8TBC5 510 aaPredicted RBP9.36□□□□□ -0.91
SSB-207ENST00000465871 FCRL2Q96LA5 508 aaPredicted RBP9.36□□□□□ -0.91
SSB-207ENST00000465871 TCAF2A6NFQ2 919 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms