RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 CYP11A1P05108 521 aa6.53□□□□□ -1.36
EXOSC3-204ENST00000465860 PAOXQ6QHF9 649 aa6.53□□□□□ -1.36
EXOSC3-204ENST00000465860 AEBP1Q8IUX7 1158 aa6.53□□□□□ -1.36
EXOSC3-204ENST00000465860 EZH1Q92800 747 aaPredicted RBP6.53□□□□□ -1.36
EXOSC3-204ENST00000465860 CCDC74AQ96AQ1 378 aa6.53□□□□□ -1.36
EXOSC3-204ENST00000465860 KRTAP4-12Q9BQ66 201 aa6.53□□□□□ -1.36
EXOSC3-204ENST00000465860 ATG3Q9NT62 314 aa6.53□□□□□ -1.36
EXOSC3-204ENST00000465860 PIM2Q9P1W9 311 aa6.53□□□□□ -1.36
EXOSC3-204ENST00000465860 ACTL7BQ9Y614 415 aa6.53□□□□□ -1.36
EXOSC3-204ENST00000465860 PAPPAQ13219 1627 aa6.53□□□□□ -1.36
EXOSC3-204ENST00000465860 COL3A1P02461 1466 aaPredicted RBP6.53□□□□□ -1.36
EXOSC3-204ENST00000465860 EIF1AYO14602 144 aaKnown RBP6.52□□□□□ -1.37
EXOSC3-204ENST00000465860 ADMP35318 185 aa6.52□□□□□ -1.37
EXOSC3-204ENST00000465860 GIMAP7Q8NHV1 300 aa6.52□□□□□ -1.37
EXOSC3-204ENST00000465860 ZCRB1Q8TBF4 217 aaKnown RBP6.52□□□□□ -1.37
EXOSC3-204ENST00000465860 OSBPL1AQ9BXW6 950 aa6.52□□□□□ -1.37
EXOSC3-204ENST00000465860 PDGFDQ9GZP0 370 aaPredicted RBP6.52□□□□□ -1.37
EXOSC3-204ENST00000465860 ABCB6Q9NP58 842 aa6.52□□□□□ -1.37
EXOSC3-204ENST00000465860 PRKAG2Q9UGJ0 569 aa6.52□□□□□ -1.37
EXOSC3-204ENST00000465860 LEMD3Q9Y2U8 911 aa6.52□□□□□ -1.37
EXOSC3-204ENST00000465860 TAF1LQ8IZX4 1826 aa6.52□□□□□ -1.37
EXOSC3-204ENST00000465860 CASZ1Q86V15 1759 aa6.52□□□□□ -1.37
EXOSC3-204ENST00000465860 IGSF1Q8N6C5 1336 aa6.51□□□□□ -1.37
EXOSC3-204ENST00000465860 PLSCR1O15162 318 aa6.51□□□□□ -1.37
EXOSC3-204ENST00000465860 WNT11O96014 354 aa6.51□□□□□ -1.37
EXOSC3-204ENST00000465860 IL13P35225 146 aa6.51□□□□□ -1.37
EXOSC3-204ENST00000465860 MTHFSP49914 203 aa6.51□□□□□ -1.37
EXOSC3-204ENST00000465860 IRAK1P51617 712 aa6.51□□□□□ -1.37
EXOSC3-204ENST00000465860 R3HDM1Q15032 1099 aaKnown RBP6.51□□□□□ -1.37
EXOSC3-204ENST00000465860 AKAP4Q5JQC9 854 aa6.51□□□□□ -1.37
EXOSC3-204ENST00000465860 TBC1D32Q96NH3 1257 aa6.51□□□□□ -1.37
EXOSC3-204ENST00000465860 CORO1BQ9BR76 489 aa6.51□□□□□ -1.37
EXOSC3-204ENST00000465860 DNAJC25Q9H1X3 360 aa6.51□□□□□ -1.37
EXOSC3-204ENST00000465860 SCN11AQ9UI33 1791 aa6.5□□□□□ -1.37
EXOSC3-204ENST00000465860 NPC1L1Q9UHC9 1359 aa6.5□□□□□ -1.37
EXOSC3-204ENST00000465860 NFICP08651 508 aa6.5□□□□□ -1.37
EXOSC3-204ENST00000465860 FOSL1P15407 271 aa6.5□□□□□ -1.37
EXOSC3-204ENST00000465860 RAB6AP20340 208 aa6.5□□□□□ -1.37
EXOSC3-204ENST00000465860 PTPN12Q05209 780 aaKnown RBP6.5□□□□□ -1.37
EXOSC3-204ENST00000465860 MSMPQ1L6U9 139 aa6.5□□□□□ -1.37
EXOSC3-204ENST00000465860 HP1BP3Q5SSJ5 553 aaPredicted RBP6.5□□□□□ -1.37
EXOSC3-204ENST00000465860 PRPF40BQ6NWY9 871 aaKnown RBP6.5□□□□□ -1.37
EXOSC3-204ENST00000465860 DYMQ7RTS9 669 aa6.5□□□□□ -1.37
EXOSC3-204ENST00000465860 ZAR1Q86SH2 424 aa6.5□□□□□ -1.37
EXOSC3-204ENST00000465860 GLIS3Q8NEA6 775 aa6.5□□□□□ -1.37
EXOSC3-204ENST00000465860 RAPGEF4Q8WZA2 1011 aa6.5□□□□□ -1.37
EXOSC3-204ENST00000465860 GATA6Q92908 595 aa6.5□□□□□ -1.37
EXOSC3-204ENST00000465860 YIPF2Q9BWQ6 316 aa6.5□□□□□ -1.37
EXOSC3-204ENST00000465860 RBCK1Q9BYM8 510 aa6.5□□□□□ -1.37
EXOSC3-204ENST00000465860 RAD18Q9NS91 495 aa6.5□□□□□ -1.37
EXOSC3-204ENST00000465860 FAM105AQ9NUU6 356 aa6.5□□□□□ -1.37
EXOSC3-204ENST00000465860 C5P01031 1676 aa6.49□□□□□ -1.37
EXOSC3-204ENST00000465860 KDRP35968 1356 aa6.49□□□□□ -1.37
EXOSC3-204ENST00000465860 TMEM238LA0A1B0GVL6 79 aa6.49□□□□□ -1.37
EXOSC3-204ENST00000465860 FAM170BA6NMN3 283 aa6.49□□□□□ -1.37
EXOSC3-204ENST00000465860 GADD45BO75293 160 aaPredicted RBP6.49□□□□□ -1.37
EXOSC3-204ENST00000465860 FAAP100Q0VG06 881 aa6.49□□□□□ -1.37
EXOSC3-204ENST00000465860 GRM2Q14416 872 aa6.49□□□□□ -1.37
EXOSC3-204ENST00000465860 CPSF6Q16630 551 aaKnown RBP eCLIP6.49□□□□□ -1.37
EXOSC3-204ENST00000465860 TXNRD1Q16881 649 aa6.49□□□□□ -1.37
EXOSC3-204ENST00000465860 EPS8L3Q8TE67 593 aaKnown RBP6.49□□□□□ -1.37
EXOSC3-204ENST00000465860 ALKBH8Q96BT7 664 aaKnown RBP6.49□□□□□ -1.37
EXOSC3-204ENST00000465860 SYTL4Q96C24 671 aaPredicted RBP6.49□□□□□ -1.37
EXOSC3-204ENST00000465860 DMRTB1Q96MA1 342 aa6.49□□□□□ -1.37
EXOSC3-204ENST00000465860 CSRNP1Q96S65 589 aa6.49□□□□□ -1.37
EXOSC3-204ENST00000465860 WDR18Q9BV38 432 aa6.49□□□□□ -1.37
EXOSC3-204ENST00000465860 SEMA6CQ9H3T2 930 aa6.49□□□□□ -1.37
EXOSC3-204ENST00000465860 GSX1Q9H4S2 264 aaPredicted RBP6.49□□□□□ -1.37
EXOSC3-204ENST00000465860 ACSS3Q9H6R3 686 aa6.49□□□□□ -1.37
EXOSC3-204ENST00000465860 ZFYVE1Q9HBF4 777 aa6.49□□□□□ -1.37
EXOSC3-204ENST00000465860 AP4E1Q9UPM8 1137 aa6.49□□□□□ -1.37
EXOSC3-204ENST00000465860 LRP5O75197 1615 aa6.49□□□□□ -1.37
EXOSC3-204ENST00000465860 KDM6AO15550 1401 aaPredicted RBP6.49□□□□□ -1.37
EXOSC3-204ENST00000465860 PCDH11XQ9BZA7 1347 aa6.49□□□□□ -1.37
EXOSC3-204ENST00000465860 PCDH11YQ9BZA8 1340 aa6.49□□□□□ -1.37
EXOSC3-204ENST00000465860 PARD3Q8TEW0 1356 aa6.48□□□□□ -1.37
EXOSC3-204ENST00000465860 SOWAHDA6NJG2 315 aa6.48□□□□□ -1.37
EXOSC3-204ENST00000465860 AOC2O75106 756 aa6.48□□□□□ -1.37
EXOSC3-204ENST00000465860 HMOX1P09601 288 aa6.48□□□□□ -1.37
EXOSC3-204ENST00000465860 PHKG2P15735 406 aa6.48□□□□□ -1.37
EXOSC3-204ENST00000465860 TAL1P17542 331 aaPredicted RBP6.48□□□□□ -1.37
EXOSC3-204ENST00000465860 ZNF157P51786 506 aaPredicted RBP6.48□□□□□ -1.37
EXOSC3-204ENST00000465860 ZNF827Q17R98 1081 aa6.48□□□□□ -1.37
EXOSC3-204ENST00000465860 SULT6B1Q6IMI4 303 aa6.48□□□□□ -1.37
EXOSC3-204ENST00000465860 METTL22Q9BUU2 404 aaPredicted RBP6.48□□□□□ -1.37
EXOSC3-204ENST00000465860 QSER1Q2KHR3 1735 aa6.47□□□□□ -1.37
EXOSC3-204ENST00000465860 DLG5Q8TDM6 1919 aa6.47□□□□□ -1.37
EXOSC3-204ENST00000465860 ADAMTS7Q9UKP4 1686 aa6.47□□□□□ -1.37
EXOSC3-204ENST00000465860 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.47□□□□□ -1.37
EXOSC3-204ENST00000465860 CYP26A1O43174 497 aa6.47□□□□□ -1.37
EXOSC3-204ENST00000465860 PPP2R1AP30153 589 aa6.47□□□□□ -1.37
EXOSC3-204ENST00000465860 ASPAP45381 313 aa6.47□□□□□ -1.37
EXOSC3-204ENST00000465860 PDE4CQ08493 712 aa6.47□□□□□ -1.37
EXOSC3-204ENST00000465860 DDX10Q13206 875 aaKnown RBP6.47□□□□□ -1.37
EXOSC3-204ENST00000465860 AP3B2Q13367 1082 aa6.47□□□□□ -1.37
EXOSC3-204ENST00000465860 MAP7Q14244 749 aa6.47□□□□□ -1.37
EXOSC3-204ENST00000465860 PDE3AQ14432 1141 aa6.47□□□□□ -1.37
EXOSC3-204ENST00000465860 RPS26P11Q5JNZ5 115 aaPredicted RBP6.47□□□□□ -1.37
EXOSC3-204ENST00000465860 MPRIPQ6WCQ1 1025 aa6.47□□□□□ -1.37
EXOSC3-204ENST00000465860 PIGBQ92521 554 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms