RNA–Protein interactions for RNA: ENST00000465582.5

SSBP1-205, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SSBP1, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-205ENST00000465582 DNAJC18Q9H819 358 aa7.73□□□□□ -1.17
SSBP1-205ENST00000465582 DCP1AQ9NPI6 582 aaPredicted RBP7.73□□□□□ -1.17
SSBP1-205ENST00000465582 PRDM10Q9NQV6 1147 aa7.73□□□□□ -1.17
SSBP1-205ENST00000465582 DIAPH3Q9NSV4 1193 aa7.73□□□□□ -1.17
SSBP1-205ENST00000465582 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.73□□□□□ -1.17
SSBP1-205ENST00000465582 CCDC171Q6TFL3 1326 aa7.73□□□□□ -1.17
SSBP1-205ENST00000465582 PTPRFP10586 1907 aa7.72□□□□□ -1.17
SSBP1-205ENST00000465582 RASSF10A6NK89 507 aa7.72□□□□□ -1.17
SSBP1-205ENST00000465582 GSG1L2A8MUP6 293 aa7.72□□□□□ -1.17
SSBP1-205ENST00000465582 PPP1R12BO60237 982 aaPredicted RBP7.72□□□□□ -1.17
SSBP1-205ENST00000465582 USP2O75604 605 aaPredicted RBP7.72□□□□□ -1.17
SSBP1-205ENST00000465582 HLA-DOAP06340 250 aa7.72□□□□□ -1.17
SSBP1-205ENST00000465582 INPP5BP32019 993 aa7.72□□□□□ -1.17
SSBP1-205ENST00000465582 IREB2P48200 963 aaKnown RBP7.72□□□□□ -1.17
SSBP1-205ENST00000465582 FKBP1BP68106 108 aa7.72□□□□□ -1.17
SSBP1-205ENST00000465582 KCNH2Q12809 1159 aa7.72□□□□□ -1.17
SSBP1-205ENST00000465582 VGLL4Q14135 290 aa7.72□□□□□ -1.17
SSBP1-205ENST00000465582 MAP3K11Q16584 847 aa7.72□□□□□ -1.17
SSBP1-205ENST00000465582 SHROOM1Q2M3G4 852 aaPredicted RBP7.72□□□□□ -1.17
SSBP1-205ENST00000465582 MAP7D1Q3KQU3 841 aa7.72□□□□□ -1.17
SSBP1-205ENST00000465582 SUPT20HL1Q3ZLR7 823 aa7.72□□□□□ -1.17
SSBP1-205ENST00000465582 BMP2KLQ5H9B9 411 aa7.72□□□□□ -1.17
SSBP1-205ENST00000465582 DCAF15Q66K64 600 aa7.72□□□□□ -1.17
SSBP1-205ENST00000465582 CWC27Q6UX04 472 aaKnown RBP7.72□□□□□ -1.17
SSBP1-205ENST00000465582 SLC44A5Q8NCS7 719 aa7.72□□□□□ -1.17
SSBP1-205ENST00000465582 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.72□□□□□ -1.177e-9■□□□□ 9.4
SSBP1-205ENST00000465582 SPSB2Q99619 263 aa7.72□□□□□ -1.17
SSBP1-205ENST00000465582 NUDT12Q9BQG2 462 aa7.72□□□□□ -1.17
SSBP1-205ENST00000465582 ZNF341Q9BYN7 854 aa7.72□□□□□ -1.17
SSBP1-205ENST00000465582 ELP3Q9H9T3 547 aa7.72□□□□□ -1.17
SSBP1-205ENST00000465582 HELLSQ9NRZ9 838 aa7.72□□□□□ -1.17
SSBP1-205ENST00000465582 MCM9Q9NXL9 1143 aa7.72□□□□□ -1.17
SSBP1-205ENST00000465582 SNCAIPQ9Y6H5 919 aa7.72□□□□□ -1.17
SSBP1-205ENST00000465582 GREB1LQ9C091 1923 aaPredicted RBP7.72□□□□□ -1.17
SSBP1-205ENST00000465582 ROBO3Q96MS0 1386 aa7.71□□□□□ -1.17
SSBP1-205ENST00000465582 AOC2O75106 756 aa7.71□□□□□ -1.18
SSBP1-205ENST00000465582 GDF11O95390 407 aa7.71□□□□□ -1.18
SSBP1-205ENST00000465582 POLR3DP05423 398 aaPredicted RBP7.71□□□□□ -1.18
SSBP1-205ENST00000465582 CHMLP26374 656 aa7.71□□□□□ -1.18
SSBP1-205ENST00000465582 TDO2P48775 406 aa7.71□□□□□ -1.18
SSBP1-205ENST00000465582 RGS19P49795 217 aa7.71□□□□□ -1.18
SSBP1-205ENST00000465582 PLCD1P51178 756 aa7.71□□□□□ -1.18
SSBP1-205ENST00000465582 RRP1BQ14684 758 aaKnown RBP7.71□□□□□ -1.18
SSBP1-205ENST00000465582 DEFB115Q30KQ5 88 aa7.71□□□□□ -1.18
SSBP1-205ENST00000465582 MCMDC2Q4G0Z9 681 aa7.71□□□□□ -1.18
SSBP1-205ENST00000465582 RGMBQ6NW40 437 aa7.71□□□□□ -1.18
SSBP1-205ENST00000465582 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.71□□□□□ -1.18
SSBP1-205ENST00000465582 CCDC84Q86UT8 332 aaPredicted RBP7.71□□□□□ -1.18
SSBP1-205ENST00000465582 STK11IPQ8N1F8 1099 aa7.71□□□□□ -1.18
SSBP1-205ENST00000465582 CRACR2BQ8N4Y2 399 aaPredicted RBP7.71□□□□□ -1.18
SSBP1-205ENST00000465582 ZKSCAN4Q969J2 545 aaPredicted RBP7.71□□□□□ -1.18
SSBP1-205ENST00000465582 HOOK2Q96ED9 719 aa7.71□□□□□ -1.18
SSBP1-205ENST00000465582 DYNLL2Q96FJ2 89 aa7.71□□□□□ -1.18
SSBP1-205ENST00000465582 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.71□□□□□ -1.18
SSBP1-205ENST00000465582 ATP8A2Q9NTI2 1148 aa7.71□□□□□ -1.18
SSBP1-205ENST00000465582 RAD50Q92878 1312 aa7.71□□□□□ -1.18
SSBP1-205ENST00000465582 LOC285556D6RIA3 1793 aa7.71□□□□□ -1.18
SSBP1-205ENST00000465582 PHF20L1A8MW92 1017 aa7.7□□□□□ -1.18
SSBP1-205ENST00000465582 FAM155AB1AL88 458 aaPredicted RBP7.7□□□□□ -1.18
SSBP1-205ENST00000465582 HIP1O00291 1037 aa7.7□□□□□ -1.18
SSBP1-205ENST00000465582 DXOO77932 396 aaKnown RBP7.7□□□□□ -1.18
SSBP1-205ENST00000465582 APPP05067 770 aa7.7□□□□□ -1.18
SSBP1-205ENST00000465582 GNAT2P19087 354 aa7.7□□□□□ -1.18
SSBP1-205ENST00000465582 VEGFBP49765 207 aa7.7□□□□□ -1.18
SSBP1-205ENST00000465582 MMP16P51512 607 aa7.7□□□□□ -1.18
SSBP1-205ENST00000465582 ZNF157P51786 506 aaPredicted RBP7.7□□□□□ -1.18
SSBP1-205ENST00000465582 LDLRAD1Q5T700 205 aa7.7□□□□□ -1.18
SSBP1-205ENST00000465582 CTR9Q6PD62 1173 aa7.7□□□□□ -1.18
SSBP1-205ENST00000465582 USP17L2Q6R6M4 530 aa7.7□□□□□ -1.18
SSBP1-205ENST00000465582 ZBTB33Q86T24 672 aa7.7□□□□□ -1.18
SSBP1-205ENST00000465582 TRIM50Q86XT4 487 aa7.7□□□□□ -1.18
SSBP1-205ENST00000465582 ANKRD13AQ8IZ07 590 aa7.7□□□□□ -1.18
SSBP1-205ENST00000465582 IFNL3Q8IZI9 196 aa7.7□□□□□ -1.18
SSBP1-205ENST00000465582 WNK4Q96J92 1243 aa7.7□□□□□ -1.18
SSBP1-205ENST00000465582 CAPNS2Q96L46 248 aa7.7□□□□□ -1.18
SSBP1-205ENST00000465582 ZIC5Q96T25 663 aa7.7□□□□□ -1.18
SSBP1-205ENST00000465582 NAPBQ9H115 298 aa7.7□□□□□ -1.18
SSBP1-205ENST00000465582 EHD4Q9H223 541 aa7.7□□□□□ -1.18
SSBP1-205ENST00000465582 DHX36Q9H2U1 1008 aaKnown RBP7.7□□□□□ -1.18
SSBP1-205ENST00000465582 PI4KBQ9UBF8 816 aa7.7□□□□□ -1.18
SSBP1-205ENST00000465582 ARPP21Q9UBL0 812 aaPredicted RBP7.7□□□□□ -1.18
SSBP1-205ENST00000465582 HERC5Q9UII4 1024 aaKnown RBP7.7□□□□□ -1.18
SSBP1-205ENST00000465582 ZNF112Q9UJU3 913 aa7.7□□□□□ -1.18
SSBP1-205ENST00000465582 RBM19Q9Y4C8 960 aaKnown RBP7.7□□□□□ -1.18
SSBP1-205ENST00000465582 CSADQ9Y600 493 aa7.7□□□□□ -1.18
SSBP1-205ENST00000465582 WDR33Q9C0J8 1336 aaKnown RBP7.7□□□□□ -1.18
SSBP1-205ENST00000465582 USP17L5A8MUK1 530 aa7.69□□□□□ -1.18
SSBP1-205ENST00000465582 MINDY4BA8MYZ0 360 aa7.69□□□□□ -1.18
SSBP1-205ENST00000465582 USP17L12C9JPN9 530 aa7.69□□□□□ -1.18
SSBP1-205ENST00000465582 USP17L21D6R901 530 aa7.69□□□□□ -1.18
SSBP1-205ENST00000465582 SGSM2O43147 1006 aa7.69□□□□□ -1.18
SSBP1-205ENST00000465582 HSPD1P10809 573 aaKnown RBP7.69□□□□□ -1.18
SSBP1-205ENST00000465582 SHMT1P34896 483 aa7.69□□□□□ -1.18
SSBP1-205ENST00000465582 JAG1P78504 1218 aa7.69□□□□□ -1.18
SSBP1-205ENST00000465582 MAP3K10Q02779 954 aa7.69□□□□□ -1.18
SSBP1-205ENST00000465582 GABPAQ06546 454 aa7.69□□□□□ -1.18
SSBP1-205ENST00000465582 NOL9Q5SY16 702 aaKnown RBP7.69□□□□□ -1.18
SSBP1-205ENST00000465582 C12orf60Q5U649 245 aa7.69□□□□□ -1.18
SSBP1-205ENST00000465582 TTC6Q86TZ1 520 aa7.69□□□□□ -1.18
SSBP1-205ENST00000465582 RNF135Q8IUD6 432 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms