RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 EBF1Q9UH73 591 aa9.15□□□□□ -0.94
SMC4-205ENST00000465563 GPR160Q9UJ42 338 aa9.15□□□□□ -0.94
SMC4-205ENST00000465563 ZNF281Q9Y2X9 895 aa9.15□□□□□ -0.94
SMC4-205ENST00000465563 CRKP46108 304 aa9.14□□□□□ -0.95
SMC4-205ENST00000465563 RAD51AP2Q09MP3 1159 aa9.14□□□□□ -0.95
SMC4-205ENST00000465563 LCE4AQ5TA78 99 aa9.14□□□□□ -0.95
SMC4-205ENST00000465563 CDCP2Q5VXM1 449 aa9.14□□□□□ -0.95
SMC4-205ENST00000465563 OVOS1Q6IE37 1185 aa9.14□□□□□ -0.95
SMC4-205ENST00000465563 GIPC2Q8TF65 315 aa9.14□□□□□ -0.95
SMC4-205ENST00000465563 INTS4Q96HW7 963 aaKnown RBP9.14□□□□□ -0.95
SMC4-205ENST00000465563 HDAC8Q9BY41 377 aa9.14□□□□□ -0.95
SMC4-205ENST00000465563 SMG5Q9UPR3 1016 aaKnown RBP9.14□□□□□ -0.95
SMC4-205ENST00000465563 RPL10P27635 214 aaKnown RBP9.13□□□□□ -0.95
SMC4-205ENST00000465563 MRPL58Q14197 206 aaKnown RBP9.13□□□□□ -0.95
SMC4-205ENST00000465563 NBPF9Q3BBW0 867 aa9.13□□□□□ -0.95
SMC4-205ENST00000465563 NBPF12Q5TAG4 269 aaPredicted RBP9.13□□□□□ -0.95
SMC4-205ENST00000465563 CIAPIN1Q6FI81 312 aa9.13□□□□□ -0.95
SMC4-205ENST00000465563 USHBP1Q8N6Y0 703 aa9.13□□□□□ -0.95
SMC4-205ENST00000465563 ZNF655Q8N720 491 aaPredicted RBP9.13□□□□□ -0.95
SMC4-205ENST00000465563 CNNM2Q9H8M5 875 aa9.13□□□□□ -0.95
SMC4-205ENST00000465563 SSU72P8A0A1W2PR75 194 aa9.12□□□□□ -0.95
SMC4-205ENST00000465563 PSPNO60542 156 aa9.12□□□□□ -0.95
SMC4-205ENST00000465563 PDE6BP35913 854 aa9.12□□□□□ -0.95
SMC4-205ENST00000465563 PCBP3P57721 371 aaKnown RBP9.12□□□□□ -0.95
SMC4-205ENST00000465563 SEZ6Q53EL9 994 aa9.12□□□□□ -0.95
SMC4-205ENST00000465563 ZNF605Q86T29 641 aa9.12□□□□□ -0.95
SMC4-205ENST00000465563 REXO1Q8N1G1 1221 aaKnown RBP9.12□□□□□ -0.95
SMC4-205ENST00000465563 ATG4CQ96DT6 458 aa9.12□□□□□ -0.95
SMC4-205ENST00000465563 TCTN2Q96GX1 697 aa9.12□□□□□ -0.95
SMC4-205ENST00000465563 G6PC3Q9BUM1 346 aa9.12□□□□□ -0.95
SMC4-205ENST00000465563 UBP1Q9NZI7 540 aa9.12□□□□□ -0.95
SMC4-205ENST00000465563 ADAMTS1Q9UHI8 967 aa9.12□□□□□ -0.95
SMC4-205ENST00000465563 ZMYM5Q9UJ78 669 aa9.12□□□□□ -0.95
SMC4-205ENST00000465563 PEX10O60683 326 aa9.11□□□□□ -0.95
SMC4-205ENST00000465563 POLR2BP30876 1174 aaKnown RBP9.11□□□□□ -0.95
SMC4-205ENST00000465563 CCNFP41002 786 aa9.11□□□□□ -0.95
SMC4-205ENST00000465563 APOBRQ0VD83 1088 aa9.11□□□□□ -0.95
SMC4-205ENST00000465563 WAPLQ7Z5K2 1190 aa9.11□□□□□ -0.95
SMC4-205ENST00000465563 TMC3Q7Z5M5 1100 aa9.11□□□□□ -0.95
SMC4-205ENST00000465563 AMIGO3Q86WK7 504 aa9.11□□□□□ -0.95
SMC4-205ENST00000465563 FOXP3Q9BZS1 431 aa9.11□□□□□ -0.95
SMC4-205ENST00000465563 MCOLN1Q9GZU1 580 aa9.11□□□□□ -0.95
SMC4-205ENST00000465563 TCFL5Q9UL49 500 aa9.11□□□□□ -0.95
SMC4-205ENST00000465563 CLEC3AO75596 197 aa9.1□□□□□ -0.95
SMC4-205ENST00000465563 MCM4P33991 863 aa9.1□□□□□ -0.95
SMC4-205ENST00000465563 ZNF165P49910 485 aa9.1□□□□□ -0.95
SMC4-205ENST00000465563 CLCQ05315 142 aa9.1□□□□□ -0.95
SMC4-205ENST00000465563 GK5Q6ZS86 529 aa9.1□□□□□ -0.95
SMC4-205ENST00000465563 NLRC3Q7RTR2 1065 aa9.1□□□□□ -0.95
SMC4-205ENST00000465563 SHISA4Q96DD7 197 aa9.1□□□□□ -0.95
SMC4-205ENST00000465563 ZNF552Q9H707 407 aaPredicted RBP9.1□□□□□ -0.95
SMC4-205ENST00000465563 SEMA7AO75326 666 aa9.09□□□□□ -0.95
SMC4-205ENST00000465563 LINC00310P59036 64 aa9.09□□□□□ -0.95
SMC4-205ENST00000465563 SNW1Q13573 536 aaKnown RBP9.09□□□□□ -0.95
SMC4-205ENST00000465563 LRRFIP1Q32MZ4 808 aaKnown RBP9.09□□□□□ -0.95
SMC4-205ENST00000465563 TMEM132EQ6IEE7 984 aa9.09□□□□□ -0.95
SMC4-205ENST00000465563 LINC00116Q8NCU8 138 aa9.09□□□□□ -0.95
SMC4-205ENST00000465563 MAP6Q96JE9 813 aa9.09□□□□□ -0.95
SMC4-205ENST00000465563 MYOCOSA0A1B0GUC4 107 aa9.08□□□□□ -0.96
SMC4-205ENST00000465563 NUAK1O60285 661 aa9.08□□□□□ -0.96
SMC4-205ENST00000465563 USP2O75604 605 aaPredicted RBP9.08□□□□□ -0.96
SMC4-205ENST00000465563 KIR2DL1P43626 348 aaPredicted RBP9.08□□□□□ -0.96
SMC4-205ENST00000465563 KIR2DL2P43627 348 aaPredicted RBP9.08□□□□□ -0.96
SMC4-205ENST00000465563 GALK1P51570 392 aa9.08□□□□□ -0.96
SMC4-205ENST00000465563 DLG4P78352 724 aa9.08□□□□□ -0.96
SMC4-205ENST00000465563 SLC14A2Q15849 920 aa9.08□□□□□ -0.96
SMC4-205ENST00000465563 NOTOA8MTQ0 251 aa9.07□□□□□ -0.96
SMC4-205ENST00000465563 SIGLEC6O43699 453 aa9.07□□□□□ -0.96
SMC4-205ENST00000465563 PRAMEF1O95521 474 aa9.07□□□□□ -0.96
SMC4-205ENST00000465563 SYPP08247 313 aa9.07□□□□□ -0.96
SMC4-205ENST00000465563 NLRX1Q86UT6 975 aa9.07□□□□□ -0.96
SMC4-205ENST00000465563 SIRT2Q8IXJ6 389 aa9.07□□□□□ -0.96
SMC4-205ENST00000465563 NKD1Q969G9 470 aa9.07□□□□□ -0.96
SMC4-205ENST00000465563 NT5C1AQ9BXI3 368 aa9.07□□□□□ -0.96
SMC4-205ENST00000465563 PRDM14Q9GZV8 571 aa9.07□□□□□ -0.96
SMC4-205ENST00000465563 TEX51A0A1B0GUA7 166 aa9.06□□□□□ -0.96
SMC4-205ENST00000465563 TMEM82A0PJX8 343 aa9.06□□□□□ -0.96
SMC4-205ENST00000465563 OR14I1A6ND48 311 aa9.06□□□□□ -0.96
SMC4-205ENST00000465563 NRDCO43847 1150 aa9.06□□□□□ -0.96
SMC4-205ENST00000465563 FKTNO75072 461 aa9.06□□□□□ -0.96
SMC4-205ENST00000465563 NME1P15531 152 aaKnown RBP9.06□□□□□ -0.96
SMC4-205ENST00000465563 CEP128Q6ZU80 1094 aa9.06□□□□□ -0.96
SMC4-205ENST00000465563 SLITRK4Q8IW52 837 aa9.06□□□□□ -0.96
SMC4-205ENST00000465563 ZNF512BQ96KM6 892 aaPredicted RBP9.06□□□□□ -0.96
SMC4-205ENST00000465563 BBS9Q3SYG4 887 aa9.05□□□□□ -0.96
SMC4-205ENST00000465563 ADGRF1Q5T601 910 aa9.05□□□□□ -0.96
SMC4-205ENST00000465563 HHIPL1Q96JK4 782 aa9.05□□□□□ -0.96
SMC4-205ENST00000465563 MKRN2Q9H000 416 aaKnown RBP9.05□□□□□ -0.96
SMC4-205ENST00000465563 ANTXR1Q9H6X2 564 aa9.05□□□□□ -0.96
SMC4-205ENST00000465563 CRTAC1Q9NQ79 661 aa9.05□□□□□ -0.96
SMC4-205ENST00000465563 MEIS3P2A8K0S8 358 aa9.04□□□□□ -0.96
SMC4-205ENST00000465563 TNFRSF10CO14798 259 aa9.04□□□□□ -0.96
SMC4-205ENST00000465563 KIAA0825Q8IV33 1275 aa9.04□□□□□ -0.96
SMC4-205ENST00000465563 TMEM192Q8IY95 271 aa9.04□□□□□ -0.96
SMC4-205ENST00000465563 TMEM87AQ8NBN3 555 aa9.04□□□□□ -0.96
SMC4-205ENST00000465563 IRF2BPLQ9H1B7 796 aa9.04□□□□□ -0.96
SMC4-205ENST00000465563 CHST7Q9NS84 486 aa9.04□□□□□ -0.96
SMC4-205ENST00000465563 EFEMP2O95967 443 aa9.03□□□□□ -0.96
SMC4-205ENST00000465563 ZPBP2Q6X784 338 aa9.03□□□□□ -0.96
SMC4-205ENST00000465563 SLC6A18Q96N87 628 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms