RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 TXNRD3Q86VQ6 643 aa20.75■□□□□ 0.91
SYNE4-204ENST00000465425 DGKHQ86XP1 1220 aa20.75■□□□□ 0.91
SYNE4-204ENST00000465425 AMOTL1Q8IY63 956 aa20.75■□□□□ 0.91
SYNE4-204ENST00000465425 PNMA1Q8ND90 353 aa20.75■□□□□ 0.91
SYNE4-204ENST00000465425 WDR24Q96S15 920 aa20.75■□□□□ 0.91
SYNE4-204ENST00000465425 RPS6KA4O75676 772 aa20.74■□□□□ 0.91
SYNE4-204ENST00000465425 LONP1P36776 959 aaKnown RBP20.74■□□□□ 0.91
SYNE4-204ENST00000465425 MKNK2Q9HBH9 465 aa20.74■□□□□ 0.91
SYNE4-204ENST00000465425 ZNF831Q5JPB2 1677 aa20.74■□□□□ 0.91
SYNE4-204ENST00000465425 SOWAHDA6NJG2 315 aa20.73■□□□□ 0.91
SYNE4-204ENST00000465425 GTPBP6O43824 516 aaPredicted RBP20.73■□□□□ 0.91
SYNE4-204ENST00000465425 LDHBP07195 334 aaKnown RBP20.73■□□□□ 0.91
SYNE4-204ENST00000465425 NT5C2P49902 561 aa20.73■□□□□ 0.91
SYNE4-204ENST00000465425 PDXDC2PQ6P474 469 aa20.73■□□□□ 0.91
SYNE4-204ENST00000465425 GPKOWQ92917 476 aaPredicted RBP eCLIP20.73■□□□□ 0.91
SYNE4-204ENST00000465425 SH3GLB2Q9NR46 395 aa20.73■□□□□ 0.91
SYNE4-204ENST00000465425 RMND1Q9NWS8 449 aa20.73■□□□□ 0.91
SYNE4-204ENST00000465425 ANKIB1Q9P2G1 1089 aa20.73■□□□□ 0.91
SYNE4-204ENST00000465425 TADA3O75528 432 aa20.73■□□□□ 0.91
SYNE4-204ENST00000465425 CLCN6P51797 869 aa20.73■□□□□ 0.91
SYNE4-204ENST00000465425 BMS1Q14692 1282 aaKnown RBP20.73■□□□□ 0.91
SYNE4-204ENST00000465425 KARSQ15046 597 aaKnown RBP20.73■□□□□ 0.91
SYNE4-204ENST00000465425 RC3H1Q5TC82 1133 aaKnown RBP20.73■□□□□ 0.91
SYNE4-204ENST00000465425 CNGA4Q8IV77 575 aa20.73■□□□□ 0.91
SYNE4-204ENST00000465425 ANKRD20A12PQ8NF67 263 aa20.73■□□□□ 0.91
SYNE4-204ENST00000465425 PCDHA4Q9UN74 947 aa20.73■□□□□ 0.91
SYNE4-204ENST00000465425 CCT6AP40227 531 aaKnown RBP20.72■□□□□ 0.91
SYNE4-204ENST00000465425 PBX1P40424 430 aa20.72■□□□□ 0.91
SYNE4-204ENST00000465425 GNAQP50148 359 aa20.72■□□□□ 0.91
SYNE4-204ENST00000465425 GABPB1Q06547 395 aaPredicted RBP20.72■□□□□ 0.91
SYNE4-204ENST00000465425 PAK1Q13153 545 aa20.72■□□□□ 0.91
SYNE4-204ENST00000465425 MTF1Q14872 753 aa20.72■□□□□ 0.91
SYNE4-204ENST00000465425 IL17AQ16552 155 aa20.72■□□□□ 0.91
SYNE4-204ENST00000465425 C12orf60Q5U649 245 aa20.72■□□□□ 0.91
SYNE4-204ENST00000465425 ZNF446Q9NWS9 450 aa20.72■□□□□ 0.91
SYNE4-204ENST00000465425 RWDD2AQ9UIY3 292 aa20.72■□□□□ 0.91
SYNE4-204ENST00000465425 CCDC194A0A1B0GVG4 234 aa20.72■□□□□ 0.91
SYNE4-204ENST00000465425 MAP3K9P80192 1104 aa20.72■□□□□ 0.91
SYNE4-204ENST00000465425 RASSF8Q8NHQ8 419 aa20.72■□□□□ 0.91
SYNE4-204ENST00000465425 WDR66Q8TBY9 1149 aa20.72■□□□□ 0.91
SYNE4-204ENST00000465425 N4BP3O15049 544 aa20.71■□□□□ 0.91
SYNE4-204ENST00000465425 MFAP3LO75121 409 aa20.71■□□□□ 0.91
SYNE4-204ENST00000465425 TSPY3P0CV98 308 aa20.71■□□□□ 0.91
SYNE4-204ENST00000465425 TSPY8P0CW00 308 aa20.71■□□□□ 0.91
SYNE4-204ENST00000465425 STAT6P42226 847 aa20.71■□□□□ 0.91
SYNE4-204ENST00000465425 SPAG1Q07617 926 aa20.71■□□□□ 0.91
SYNE4-204ENST00000465425 CCDC178Q5BJE1 867 aa20.71■□□□□ 0.91
SYNE4-204ENST00000465425 ZNF658Q5TYW1 1059 aaPredicted RBP20.71■□□□□ 0.91
SYNE4-204ENST00000465425 CCDC12Q8WUD4 166 aaPredicted RBP20.71■□□□□ 0.91
SYNE4-204ENST00000465425 IL17RBQ9NRM6 502 aa20.71■□□□□ 0.91
SYNE4-204ENST00000465425 RTCBQ9Y3I0 505 aaKnown RBP20.71■□□□□ 0.91
SYNE4-204ENST00000465425 KIAA1551Q9HCM1 1747 aa20.71■□□□□ 0.91
SYNE4-204ENST00000465425 MAST2Q6P0Q8 1798 aa20.71■□□□□ 0.91
SYNE4-204ENST00000465425 ADAMTS3O15072 1205 aa20.71■□□□□ 0.91
SYNE4-204ENST00000465425 BAG3O95817 575 aa20.71■□□□□ 0.91
SYNE4-204ENST00000465425 CASP14P31944 242 aa20.71■□□□□ 0.91
SYNE4-204ENST00000465425 CREBRFQ8IUR6 639 aa20.71■□□□□ 0.91
SYNE4-204ENST00000465425 STAG2Q8N3U4 1231 aa20.71■□□□□ 0.91
SYNE4-204ENST00000465425 DYNLL2Q96FJ2 89 aa20.71■□□□□ 0.91
SYNE4-204ENST00000465425 MTRQ99707 1265 aa20.71■□□□□ 0.91
SYNE4-204ENST00000465425 MRFAP1Q9Y605 127 aa20.71■□□□□ 0.91
SYNE4-204ENST00000465425 CCDC88AQ3V6T2 1871 aa20.7■□□□□ 0.9
SYNE4-204ENST00000465425 COBLO75128 1261 aa20.7■□□□□ 0.9
SYNE4-204ENST00000465425 RPN1P04843 607 aaKnown RBP20.7■□□□□ 0.9
SYNE4-204ENST00000465425 CDC25AP30304 524 aa20.7■□□□□ 0.9
SYNE4-204ENST00000465425 PPP2R3AQ06190 1150 aa20.7■□□□□ 0.9
SYNE4-204ENST00000465425 KRT31Q15323 416 aa20.7■□□□□ 0.9
SYNE4-204ENST00000465425 TMCO3Q6UWJ1 677 aa20.7■□□□□ 0.9
SYNE4-204ENST00000465425 CCDC148Q8NFR7 591 aa20.7■□□□□ 0.9
SYNE4-204ENST00000465425 CCDC51Q96ER9 411 aa20.7■□□□□ 0.9
SYNE4-204ENST00000465425 MRPL44Q9H9J2 332 aaKnown RBP20.7■□□□□ 0.9
SYNE4-204ENST00000465425 LZTFL1Q9NQ48 299 aa20.7■□□□□ 0.9
SYNE4-204ENST00000465425 ITIH6Q6UXX5 1313 aa20.7■□□□□ 0.9
SYNE4-204ENST00000465425 FAM205AQ6ZU69 1335 aa20.7■□□□□ 0.9
SYNE4-204ENST00000465425 GSTO1P78417 241 aa20.7■□□□□ 0.9
SYNE4-204ENST00000465425 DTHD1Q6ZMT9 781 aa20.7■□□□□ 0.9
SYNE4-204ENST00000465425 ZNF444Q8N0Y2 327 aaPredicted RBP20.7■□□□□ 0.9
SYNE4-204ENST00000465425 RASGRP4Q8TDF6 673 aa20.7■□□□□ 0.9
SYNE4-204ENST00000465425 SH3RF3Q8TEJ3 882 aaPredicted RBP20.7■□□□□ 0.9
SYNE4-204ENST00000465425 NELFBQ8WX92 580 aa20.7■□□□□ 0.9
SYNE4-204ENST00000465425 KIFC2Q96AC6 838 aa20.7■□□□□ 0.9
SYNE4-204ENST00000465425 FAM53CQ9NYF3 392 aa20.7■□□□□ 0.9
SYNE4-204ENST00000465425 MKRN1Q9UHC7 482 aaKnown RBP20.7■□□□□ 0.9
SYNE4-204ENST00000465425 ADGRG1Q9Y653 693 aa20.7■□□□□ 0.9
SYNE4-204ENST00000465425 GYPCP04921 128 aa20.69■□□□□ 0.9
SYNE4-204ENST00000465425 TM4SF1P30408 202 aa20.69■□□□□ 0.9
SYNE4-204ENST00000465425 GRM4Q14833 912 aa20.69■□□□□ 0.9
SYNE4-204ENST00000465425 RAD9BQ6WBX8 426 aa20.69■□□□□ 0.9
SYNE4-204ENST00000465425 DISC1Q9NRI5 854 aa20.69■□□□□ 0.9
SYNE4-204ENST00000465425 LIMA1Q9UHB6 759 aaKnown RBP20.69■□□□□ 0.9
SYNE4-204ENST00000465425 MTMR7Q9Y216 660 aa20.69■□□□□ 0.9
SYNE4-204ENST00000465425 PTF1AQ7RTS3 328 aa20.69■□□□□ 0.9
SYNE4-204ENST00000465425 HEATR3Q7Z4Q2 680 aa20.69■□□□□ 0.9
SYNE4-204ENST00000465425 C4orf32Q8N8J7 132 aa20.69■□□□□ 0.9
SYNE4-204ENST00000465425 MAD2L2Q9UI95 211 aa20.69■□□□□ 0.9
SYNE4-204ENST00000465425 STX8Q9UNK0 236 aa20.69■□□□□ 0.9
SYNE4-204ENST00000465425 USP17L3A6NCW0 530 aa20.68■□□□□ 0.9
SYNE4-204ENST00000465425 USP17L4A6NCW7 530 aa20.68■□□□□ 0.9
SYNE4-204ENST00000465425 KIF5CO60282 957 aa20.68■□□□□ 0.9
SYNE4-204ENST00000465425 IGSF3O75054 1194 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms