RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 BMP3P12645 472 aa19.88■□□□□ 0.77
USP39-211ENST00000465282 PSMA5P28066 241 aa19.88■□□□□ 0.77
USP39-211ENST00000465282 SLC1A4P43007 532 aa19.88■□□□□ 0.77
USP39-211ENST00000465282 LBX1P52954 281 aa19.88■□□□□ 0.77
USP39-211ENST00000465282 SP3Q02447 781 aa19.88■□□□□ 0.77
USP39-211ENST00000465282 FAM110CQ1W6H9 321 aa19.88■□□□□ 0.77
USP39-211ENST00000465282 C8orf34Q49A92 452 aa19.88■□□□□ 0.77
USP39-211ENST00000465282 FAM83BQ5T0W9 1011 aa19.88■□□□□ 0.77
USP39-211ENST00000465282 MB21D1Q8N884 522 aa19.88■□□□□ 0.77
USP39-211ENST00000465282 FEM1BQ9UK73 627 aa19.88■□□□□ 0.77
USP39-211ENST00000465282 SNX14Q9Y5W7 946 aa19.88■□□□□ 0.77
USP39-211ENST00000465282 PRC1O43663 620 aa19.87■□□□□ 0.77
USP39-211ENST00000465282 FLOT1O75955 427 aa19.87■□□□□ 0.77
USP39-211ENST00000465282 FDX1P10109 184 aa19.87■□□□□ 0.77
USP39-211ENST00000465282 ANAPC15P60006 121 aa19.87■□□□□ 0.77
USP39-211ENST00000465282 WTAPQ15007 396 aa19.87■□□□□ 0.77
USP39-211ENST00000465282 ARHGEF6Q15052 776 aa19.87■□□□□ 0.77
USP39-211ENST00000465282 DHX32Q7L7V1 743 aaKnown RBP19.87■□□□□ 0.77
USP39-211ENST00000465282 PRPF38AQ8NAV1 312 aaKnown RBP19.87■□□□□ 0.77
USP39-211ENST00000465282 PNMA1Q8ND90 353 aa19.87■□□□□ 0.77
USP39-211ENST00000465282 IGDCC4Q8TDY8 1250 aa19.87■□□□□ 0.77
USP39-211ENST00000465282 CHURC1Q8WUH1 139 aa19.87■□□□□ 0.77
USP39-211ENST00000465282 ZNF296Q8WUU4 475 aaPredicted RBP19.87■□□□□ 0.77
USP39-211ENST00000465282 ERO1AQ96HE7 468 aa19.87■□□□□ 0.77
USP39-211ENST00000465282 MORF4L1Q9UBU8 362 aa19.87■□□□□ 0.77
USP39-211ENST00000465282 RABGAP1Q9Y3P9 1069 aa19.87■□□□□ 0.77
USP39-211ENST00000465282 DSG3P32926 999 aa19.86■□□□□ 0.77
USP39-211ENST00000465282 ANTXR2P58335 489 aa19.86■□□□□ 0.77
USP39-211ENST00000465282 TMEM67Q5HYA8 995 aa19.86■□□□□ 0.77
USP39-211ENST00000465282 FAM160B2Q86V87 743 aa19.86■□□□□ 0.77
USP39-211ENST00000465282 CPA4Q9UI42 421 aa19.86■□□□□ 0.77
USP39-211ENST00000465282 ADAMTS5Q9UNA0 930 aa19.86■□□□□ 0.77
USP39-211ENST00000465282 MGAMO43451 1857 aa19.86■□□□□ 0.77
USP39-211ENST00000465282 A0A0G2JMZ2 1700 aa19.85■□□□□ 0.77
USP39-211ENST00000465282 SPDYE16A6NNV3 312 aaPredicted RBP19.85■□□□□ 0.77
USP39-211ENST00000465282 SNHG28P0DPA3 235 aa19.85■□□□□ 0.77
USP39-211ENST00000465282 PDHBP11177 359 aa19.85■□□□□ 0.77
USP39-211ENST00000465282 LIFRP42702 1097 aa19.85■□□□□ 0.77
USP39-211ENST00000465282 STAT2P52630 851 aa19.85■□□□□ 0.77
USP39-211ENST00000465282 EXOSC10Q01780 885 aaKnown RBP19.85■□□□□ 0.77
USP39-211ENST00000465282 KIF22Q14807 665 aa19.85■□□□□ 0.77
USP39-211ENST00000465282 ADCK5Q3MIX3 580 aa19.85■□□□□ 0.77
USP39-211ENST00000465282 GPATCH4Q5T3I0 446 aaKnown RBP19.85■□□□□ 0.77
USP39-211ENST00000465282 SLF1Q9BQI6 1058 aa19.85■□□□□ 0.77
USP39-211ENST00000465282 TM6SF1Q9BZW5 370 aa19.85■□□□□ 0.77
USP39-211ENST00000465282 PPP1R9AQ9ULJ8 1098 aa19.85■□□□□ 0.77
USP39-211ENST00000465282 COL11A1P12107 1806 aaPredicted RBP19.84■□□□□ 0.77
USP39-211ENST00000465282 BLOC1S2Q6QNY1 142 aa19.84■□□□□ 0.77
USP39-211ENST00000465282 CHST3Q7LGC8 479 aa19.84■□□□□ 0.77
USP39-211ENST00000465282 ANKRD13CQ8N6S4 541 aa19.84■□□□□ 0.77
USP39-211ENST00000465282 GPRC5AQ8NFJ5 357 aa19.84■□□□□ 0.77
USP39-211ENST00000465282 JAKMIP1Q96N16 626 aaKnown RBP19.84■□□□□ 0.77
USP39-211ENST00000465282 NUP88Q99567 741 aaPredicted RBP19.84■□□□□ 0.77
USP39-211ENST00000465282 RBPJLQ9UBG7 517 aa19.84■□□□□ 0.77
USP39-211ENST00000465282 GNRH1P01148 92 aa19.83■□□□□ 0.77
USP39-211ENST00000465282 CCNA1P78396 465 aa19.83■□□□□ 0.77
USP39-211ENST00000465282 LACTBP83111 547 aaPredicted RBP19.83■□□□□ 0.77
USP39-211ENST00000465282 FBXL16Q8N461 479 aa19.83■□□□□ 0.77
USP39-211ENST00000465282 MAP3K14Q99558 947 aa19.83■□□□□ 0.77
USP39-211ENST00000465282 LY9Q9HBG7 655 aa19.83■□□□□ 0.77
USP39-211ENST00000465282 TMEM232C9JQI7 657 aa19.82■□□□□ 0.76
USP39-211ENST00000465282 SH2B2O14492 632 aaPredicted RBP19.82■□□□□ 0.76
USP39-211ENST00000465282 SEC24BO95487 1268 aa19.82■□□□□ 0.76
USP39-211ENST00000465282 ERVK-9P63128 1117 aa19.82■□□□□ 0.76
USP39-211ENST00000465282 ERVK-24P63145 666 aa19.82■□□□□ 0.76
USP39-211ENST00000465282 ZNF543Q08ER8 600 aa19.82■□□□□ 0.76
USP39-211ENST00000465282 CCDC96Q2M329 555 aa19.82■□□□□ 0.76
USP39-211ENST00000465282 ASPRV1Q53RT3 343 aa19.82■□□□□ 0.76
USP39-211ENST00000465282 BTNL9Q6UXG8 535 aa19.82■□□□□ 0.76
USP39-211ENST00000465282 CATIPQ7Z7H3 387 aa19.82■□□□□ 0.76
USP39-211ENST00000465282 SGMS1Q86VZ5 419 aa19.82■□□□□ 0.76
USP39-211ENST00000465282 IL17RAQ96F46 866 aa19.82■□□□□ 0.76
USP39-211ENST00000465282 FBXO28Q9NVF7 368 aa19.82■□□□□ 0.76
USP39-211ENST00000465282 VWA5AO00534 786 aa19.81■□□□□ 0.76
USP39-211ENST00000465282 KCTD1Q719H9 257 aa19.81■□□□□ 0.76
USP39-211ENST00000465282 ATG4CQ96DT6 458 aa19.81■□□□□ 0.76
USP39-211ENST00000465282 ZSWIM6Q9HCJ5 1215 aa19.81■□□□□ 0.76
USP39-211ENST00000465282 TXNRD2Q9NNW7 524 aa19.81■□□□□ 0.76
USP39-211ENST00000465282 ISY1Q9ULR0 285 aaKnown RBP19.81■□□□□ 0.76
USP39-211ENST00000465282 MTMR7Q9Y216 660 aa19.81■□□□□ 0.76
USP39-211ENST00000465282 CCDC69A6NI79 296 aa19.8■□□□□ 0.76
USP39-211ENST00000465282 ZBED4O75132 1171 aa19.8■□□□□ 0.76
USP39-211ENST00000465282 PARP1P09874 1014 aaKnown RBP19.8■□□□□ 0.76
USP39-211ENST00000465282 CALM1P0DP23 149 aa19.8■□□□□ 0.76
USP39-211ENST00000465282 CALM2P0DP24 149 aa19.8■□□□□ 0.76
USP39-211ENST00000465282 CALM3P0DP25 149 aa19.8■□□□□ 0.76
USP39-211ENST00000465282 CASTP20810 708 aaKnown RBP19.8■□□□□ 0.76
USP39-211ENST00000465282 RPS6KB1P23443 525 aa19.8■□□□□ 0.76
USP39-211ENST00000465282 TROAPQ12815 778 aa19.8■□□□□ 0.76
USP39-211ENST00000465282 IKQ13123 557 aaPredicted RBP19.8■□□□□ 0.76
USP39-211ENST00000465282 POTEEQ6S8J3 1075 aa19.8■□□□□ 0.76
USP39-211ENST00000465282 RUFY3Q7L099 469 aa19.8■□□□□ 0.76
USP39-211ENST00000465282 KIFC2Q96AC6 838 aa19.8■□□□□ 0.76
USP39-211ENST00000465282 PAGR1Q9BTK6 254 aa19.8■□□□□ 0.76
USP39-211ENST00000465282 UPF2Q9HAU5 1272 aaKnown RBP19.8■□□□□ 0.76
USP39-211ENST00000465282 CYP46A1Q9Y6A2 500 aa19.8■□□□□ 0.76
USP39-211ENST00000465282 ATP2A1O14983 1001 aa19.79■□□□□ 0.76
USP39-211ENST00000465282 DDAH1O94760 285 aa19.79■□□□□ 0.76
USP39-211ENST00000465282 MAPK4P31152 587 aa19.79■□□□□ 0.76
USP39-211ENST00000465282 COPB2P35606 906 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms