RNA–Protein interactions for RNA: ENST00000465003.5

APTX-213, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,991 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-213ENST00000465003 LPAR1Q92633 364 aa13.95□□□□□ -0.18
APTX-213ENST00000465003 ATG4CQ96DT6 458 aa13.95□□□□□ -0.18
APTX-213ENST00000465003 LARP6Q9BRS8 491 aaKnown RBP13.95□□□□□ -0.18
APTX-213ENST00000465003 KAT14Q9H8E8 782 aa13.95□□□□□ -0.18
APTX-213ENST00000465003 GPCPD1Q9NPB8 672 aa13.95□□□□□ -0.18
APTX-213ENST00000465003 COL11A1P12107 1806 aaPredicted RBP13.95□□□□□ -0.18
APTX-213ENST00000465003 ADGRA2Q96PE1 1338 aa13.95□□□□□ -0.18
APTX-213ENST00000465003 SPDYE16A6NNV3 312 aaPredicted RBP13.94□□□□□ -0.18
APTX-213ENST00000465003 USP17L15C9J2P7 530 aa13.94□□□□□ -0.18
APTX-213ENST00000465003 USP17L13C9JLJ4 530 aa13.94□□□□□ -0.18
APTX-213ENST00000465003 USP17L11C9JVI0 530 aa13.94□□□□□ -0.18
APTX-213ENST00000465003 USP17L18D6R9N7 530 aa13.94□□□□□ -0.18
APTX-213ENST00000465003 USP17L22D6RA61 530 aa13.94□□□□□ -0.18
APTX-213ENST00000465003 USP17L17D6RBQ6 530 aa13.94□□□□□ -0.18
APTX-213ENST00000465003 USP17L19D6RCP7 530 aa13.94□□□□□ -0.18
APTX-213ENST00000465003 USP17L20D6RJB6 530 aa13.94□□□□□ -0.18
APTX-213ENST00000465003 GPR25O00155 361 aa13.94□□□□□ -0.18
APTX-213ENST00000465003 WDR46O15213 610 aaKnown RBP13.94□□□□□ -0.18
APTX-213ENST00000465003 HOXA7P31268 230 aaPredicted RBP13.94□□□□□ -0.18
APTX-213ENST00000465003 USP17L24Q0WX57 530 aa13.94□□□□□ -0.18
APTX-213ENST00000465003 IKQ13123 557 aaPredicted RBP13.94□□□□□ -0.18
APTX-213ENST00000465003 IGDCC4Q8TDY8 1250 aa13.94□□□□□ -0.18
APTX-213ENST00000465003 SAGE1Q9NXZ1 904 aa13.94□□□□□ -0.18
APTX-213ENST00000465003 TMEM232C9JQI7 657 aa13.94□□□□□ -0.18
APTX-213ENST00000465003 PDHBP11177 359 aa13.94□□□□□ -0.18
APTX-213ENST00000465003 OSBPP22059 807 aa13.94□□□□□ -0.18
APTX-213ENST00000465003 CTGFP29279 349 aa13.94□□□□□ -0.18
APTX-213ENST00000465003 MCM5P33992 734 aa13.94□□□□□ -0.18
APTX-213ENST00000465003 WTAPQ15007 396 aa13.94□□□□□ -0.18
APTX-213ENST00000465003 CCDC144CPQ8IYA2 1237 aa13.94□□□□□ -0.18
APTX-213ENST00000465003 GMCL1P1Q8NEA9 526 aa13.94□□□□□ -0.18
APTX-213ENST00000465003 KCNB2Q92953 911 aa13.94□□□□□ -0.18
APTX-213ENST00000465003 KIFC2Q96AC6 838 aa13.94□□□□□ -0.18
APTX-213ENST00000465003 LY9Q9HBG7 655 aa13.94□□□□□ -0.18
APTX-213ENST00000465003 BMP3P12645 472 aa13.93□□□□□ -0.18
APTX-213ENST00000465003 SLC4A3P48751 1232 aa13.93□□□□□ -0.18
APTX-213ENST00000465003 Q3C1V9 767 aa13.93□□□□□ -0.18
APTX-213ENST00000465003 TSGA10IPQ3SY00 556 aa13.93□□□□□ -0.18
APTX-213ENST00000465003 DGKHQ86XP1 1220 aa13.93□□□□□ -0.18
APTX-213ENST00000465003 CD99L2Q8TCZ2 262 aa13.93□□□□□ -0.18
APTX-213ENST00000465003 PNMA3Q9UL41 463 aa13.93□□□□□ -0.18
APTX-213ENST00000465003 ERICH2A1L162 156 aa13.92□□□□□ -0.18
APTX-213ENST00000465003 SH2B2O14492 632 aaPredicted RBP13.92□□□□□ -0.18
APTX-213ENST00000465003 CTCFP49711 727 aaPredicted RBP13.92□□□□□ -0.18
APTX-213ENST00000465003 PABPC4Q13310 644 aaKnown RBP eCLIP13.92□□□□□ -0.18
APTX-213ENST00000465003 C17orf99Q6UX52 265 aa13.92□□□□□ -0.18
APTX-213ENST00000465003 NUP133Q8WUM0 1156 aa13.92□□□□□ -0.18
APTX-213ENST00000465003 BTBD7Q9P203 1132 aa13.92□□□□□ -0.18
APTX-213ENST00000465003 PLS1Q14651 629 aa13.92□□□□□ -0.18
APTX-213ENST00000465003 BLOC1S2Q6QNY1 142 aa13.92□□□□□ -0.18
APTX-213ENST00000465003 NFXL1Q6ZNB6 911 aa13.92□□□□□ -0.18
APTX-213ENST00000465003 DHX32Q7L7V1 743 aaKnown RBP13.92□□□□□ -0.18
APTX-213ENST00000465003 STAG2Q8N3U4 1231 aa13.92□□□□□ -0.18
APTX-213ENST00000465003 TTC14Q96N46 770 aa13.92□□□□□ -0.18
APTX-213ENST00000465003 UBA5Q9GZZ9 404 aa13.92□□□□□ -0.18
APTX-213ENST00000465003 RBPJLQ9UBG7 517 aa13.92□□□□□ -0.18
APTX-213ENST00000465003 SLC45A1Q9Y2W3 748 aa13.92□□□□□ -0.18
APTX-213ENST00000465003 CNMDO75829 334 aa13.91□□□□□ -0.18
APTX-213ENST00000465003 BCRP11274 1271 aa13.91□□□□□ -0.18
APTX-213ENST00000465003 EXOSC10Q01780 885 aaKnown RBP13.91□□□□□ -0.18
APTX-213ENST00000465003 KRT32Q14532 448 aa13.91□□□□□ -0.18
APTX-213ENST00000465003 COG2Q14746 738 aa13.91□□□□□ -0.18
APTX-213ENST00000465003 SART3Q15020 963 aaKnown RBP13.91□□□□□ -0.18
APTX-213ENST00000465003 Q6ZUG5 572 aa13.91□□□□□ -0.18
APTX-213ENST00000465003 NOL8Q76FK4 1167 aaKnown RBP13.91□□□□□ -0.18
APTX-213ENST00000465003 GMCL1Q96IK5 515 aa13.91□□□□□ -0.18
APTX-213ENST00000465003 ZCCHC17Q9NP64 241 aaKnown RBP13.91□□□□□ -0.18
APTX-213ENST00000465003 NAP1L2Q9ULW6 460 aaPredicted RBP13.91□□□□□ -0.18
APTX-213ENST00000465003 DTNBO60941 627 aa13.91□□□□□ -0.18
APTX-213ENST00000465003 DSG3P32926 999 aa13.91□□□□□ -0.18
APTX-213ENST00000465003 FGD1P98174 961 aa13.91□□□□□ -0.18
APTX-213ENST00000465003 SP3Q02447 781 aa13.91□□□□□ -0.18
APTX-213ENST00000465003 MICU3Q86XE3 530 aa13.91□□□□□ -0.18
APTX-213ENST00000465003 CMTR1Q8N1G2 835 aaKnown RBP13.91□□□□□ -0.18
APTX-213ENST00000465003 SLF1Q9BQI6 1058 aa13.91□□□□□ -0.18
APTX-213ENST00000465003 PORCNQ9H237 461 aa13.91□□□□□ -0.18
APTX-213ENST00000465003 PPP1R9AQ9ULJ8 1098 aa13.91□□□□□ -0.18
APTX-213ENST00000465003 BAZ2BQ9UIF8 2168 aaKnown RBP13.9□□□□□ -0.18
APTX-213ENST00000465003 A0A0G2JMZ2 1700 aa13.9□□□□□ -0.18
APTX-213ENST00000465003 RPS6KB1P23443 525 aa13.9□□□□□ -0.18
APTX-213ENST00000465003 STAT2P52630 851 aa13.9□□□□□ -0.18
APTX-213ENST00000465003 ZNF543Q08ER8 600 aa13.9□□□□□ -0.18
APTX-213ENST00000465003 APOBRQ0VD83 1088 aa13.9□□□□□ -0.18
APTX-213ENST00000465003 WDR78Q5VTH9 848 aa13.9□□□□□ -0.18
APTX-213ENST00000465003 ZNF654Q8IZM8 581 aa13.9□□□□□ -0.18
APTX-213ENST00000465003 CPXCR1Q8N123 301 aa13.9□□□□□ -0.18
APTX-213ENST00000465003 PIBF1Q8WXW3 757 aa13.9□□□□□ -0.18
APTX-213ENST00000465003 BRF1Q92994 677 aa13.9□□□□□ -0.18
APTX-213ENST00000465003 CFHR5Q9BXR6 569 aa13.9□□□□□ -0.18
APTX-213ENST00000465003 BRPF3Q9ULD4 1205 aa13.9□□□□□ -0.18
APTX-213ENST00000465003 SMCHD1A6NHR9 2005 aa13.9□□□□□ -0.18
APTX-213ENST00000465003 DOCK3Q8IZD9 2030 aa13.9□□□□□ -0.18
APTX-213ENST00000465003 VWA5AO00534 786 aa13.89□□□□□ -0.19
APTX-213ENST00000465003 FKTNO75072 461 aa13.89□□□□□ -0.19
APTX-213ENST00000465003 PPFIA3O75145 1194 aa13.89□□□□□ -0.19
APTX-213ENST00000465003 SNHG28P0DPA3 235 aa13.89□□□□□ -0.19
APTX-213ENST00000465003 ERVK-9P63128 1117 aa13.89□□□□□ -0.19
APTX-213ENST00000465003 ERVK-24P63145 666 aa13.89□□□□□ -0.19
APTX-213ENST00000465003 LACTBP83111 547 aaPredicted RBP13.89□□□□□ -0.19
APTX-213ENST00000465003 TMEM132BQ14DG7 1078 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms