RNA–Protein interactions for RNA: ENST00000464889.5

PCMT1-205, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCMT1, Length 1,984 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMT1-205ENST00000464889 FOXP4Q8IVH2 680 aaPredicted RBP23.29■■□□□ 1.32
PCMT1-205ENST00000464889 SH3RF3Q8TEJ3 882 aaPredicted RBP23.29■■□□□ 1.32
PCMT1-205ENST00000464889 ANKS1AQ92625 1134 aa23.29■■□□□ 1.32
PCMT1-205ENST00000464889 USP17L3A6NCW0 530 aa23.28■■□□□ 1.32
PCMT1-205ENST00000464889 USP17L4A6NCW7 530 aa23.28■■□□□ 1.32
PCMT1-205ENST00000464889 FAM205CA6NFA0 338 aa23.28■■□□□ 1.32
PCMT1-205ENST00000464889 POLR2DO15514 142 aaKnown RBP23.28■■□□□ 1.32
PCMT1-205ENST00000464889 SCG2P13521 617 aa23.28■■□□□ 1.32
PCMT1-205ENST00000464889 ATP2B1P20020 1258 aa23.28■■□□□ 1.32
PCMT1-205ENST00000464889 STRIP1Q5VSL9 837 aa23.28■■□□□ 1.32
PCMT1-205ENST00000464889 ISM2Q6H9L7 571 aa23.28■■□□□ 1.32
PCMT1-205ENST00000464889 USP17L1Q7RTZ2 530 aa23.28■■□□□ 1.32
PCMT1-205ENST00000464889 CERS5Q8N5B7 392 aa23.28■■□□□ 1.32
PCMT1-205ENST00000464889 CSRNP2Q9H175 543 aa23.28■■□□□ 1.32
PCMT1-205ENST00000464889 HSD3B7Q9H2F3 369 aa23.28■■□□□ 1.32
PCMT1-205ENST00000464889 DDX60LQ5H9U9 1706 aaKnown RBP23.28■■□□□ 1.32
PCMT1-205ENST00000464889 CDK5RAP2Q96SN8 1893 aa23.28■■□□□ 1.32
PCMT1-205ENST00000464889 CCZ1BP86790 482 aa23.27■■□□□ 1.32
PCMT1-205ENST00000464889 CCZ1P86791 482 aaPredicted RBP23.27■■□□□ 1.32
PCMT1-205ENST00000464889 PFKFB3Q16875 520 aaPredicted RBP23.27■■□□□ 1.32
PCMT1-205ENST00000464889 EARS2Q5JPH6 523 aaKnown RBP23.27■■□□□ 1.32
PCMT1-205ENST00000464889 TRIML1Q8N9V2 468 aa23.27■■□□□ 1.32
PCMT1-205ENST00000464889 CCDC150Q8NCX0 1101 aa23.27■■□□□ 1.32
PCMT1-205ENST00000464889 FERMT2Q96AC1 680 aa23.27■■□□□ 1.32
PCMT1-205ENST00000464889 KAT14Q9H8E8 782 aa23.27■■□□□ 1.32
PCMT1-205ENST00000464889 SERTAD1Q9UHV2 236 aa23.27■■□□□ 1.32
PCMT1-205ENST00000464889 ACTN4O43707 911 aaKnown RBP23.27■■□□□ 1.32
PCMT1-205ENST00000464889 FANCCQ00597 558 aa23.27■■□□□ 1.32
PCMT1-205ENST00000464889 ARID5BQ14865 1188 aa23.27■■□□□ 1.32
PCMT1-205ENST00000464889 JDP2Q8WYK2 163 aa23.27■■□□□ 1.32
PCMT1-205ENST00000464889 ZNRF3Q9ULT6 936 aa23.27■■□□□ 1.32
PCMT1-205ENST00000464889 FOXN1O15353 648 aa23.26■■□□□ 1.31
PCMT1-205ENST00000464889 SKILP12757 684 aa23.26■■□□□ 1.31
PCMT1-205ENST00000464889 YBX3P16989 372 aaKnown RBP eCLIP23.26■■□□□ 1.31
PCMT1-205ENST00000464889 LMOD1P29536 600 aaPredicted RBP23.26■■□□□ 1.31
PCMT1-205ENST00000464889 DACT2Q5SW24 774 aa23.26■■□□□ 1.31
PCMT1-205ENST00000464889 CCDC34Q96HJ3 373 aa23.26■■□□□ 1.31
PCMT1-205ENST00000464889 DACH1Q9UI36 760 aa23.26■■□□□ 1.31
PCMT1-205ENST00000464889 MAN1B1Q9UKM7 699 aa23.26■■□□□ 1.31
PCMT1-205ENST00000464889 F8W031 263 aaPredicted RBP23.25■■□□□ 1.31
PCMT1-205ENST00000464889 CBFA2T2O43439 604 aa23.25■■□□□ 1.31
PCMT1-205ENST00000464889 RAD17O75943 681 aa23.25■■□□□ 1.31
PCMT1-205ENST00000464889 SARSP49591 514 aaKnown RBP23.25■■□□□ 1.31
PCMT1-205ENST00000464889 TFAP4Q01664 338 aa23.25■■□□□ 1.31
PCMT1-205ENST00000464889 DIXDC1Q155Q3 683 aa23.25■■□□□ 1.31
PCMT1-205ENST00000464889 TRAPPC10P48553 1259 aa23.25■■□□□ 1.31
PCMT1-205ENST00000464889 PRELPP51888 382 aa23.25■■□□□ 1.31
PCMT1-205ENST00000464889 TTC38Q5R3I4 469 aa23.25■■□□□ 1.31
PCMT1-205ENST00000464889 SMARCE1Q969G3 411 aa23.25■■□□□ 1.31
PCMT1-205ENST00000464889 TCP11L1Q9NUJ3 509 aa23.25■■□□□ 1.31
PCMT1-205ENST00000464889 TMC6Q7Z403 805 aa23.24■■□□□ 1.31
PCMT1-205ENST00000464889 IL17RBQ9NRM6 502 aa23.24■■□□□ 1.31
PCMT1-205ENST00000464889 KCND1Q9NSA2 647 aa23.24■■□□□ 1.31
PCMT1-205ENST00000464889 PRR29P0C7W0 189 aa23.23■■□□□ 1.31
PCMT1-205ENST00000464889 BMP6P22004 513 aa23.23■■□□□ 1.31
PCMT1-205ENST00000464889 MLKLQ8NB16 471 aa23.23■■□□□ 1.31
PCMT1-205ENST00000464889 PNMA1Q8ND90 353 aa23.23■■□□□ 1.31
PCMT1-205ENST00000464889 SUGT1Q9Y2Z0 365 aa23.23■■□□□ 1.31
PCMT1-205ENST00000464889 CALML3P27482 149 aa23.23■■□□□ 1.31
PCMT1-205ENST00000464889 GNAQP50148 359 aa23.23■■□□□ 1.31
PCMT1-205ENST00000464889 NLRP5P59047 1200 aa23.23■■□□□ 1.31
PCMT1-205ENST00000464889 ATP2C1P98194 919 aaPredicted RBP23.23■■□□□ 1.31
PCMT1-205ENST00000464889 MORC3Q14149 939 aa23.23■■□□□ 1.31
PCMT1-205ENST00000464889 GRM4Q14833 912 aa23.23■■□□□ 1.31
PCMT1-205ENST00000464889 SPATA20Q8TB22 786 aa23.23■■□□□ 1.31
PCMT1-205ENST00000464889 TGFBRAP1Q8WUH2 860 aa23.23■■□□□ 1.31
PCMT1-205ENST00000464889 DYNLL2Q96FJ2 89 aa23.23■■□□□ 1.31
PCMT1-205ENST00000464889 C16orf45Q96MC5 204 aaPredicted RBP23.23■■□□□ 1.31
PCMT1-205ENST00000464889 MKNK2Q9HBH9 465 aa23.23■■□□□ 1.31
PCMT1-205ENST00000464889 SH3GLB2Q9NR46 395 aa23.23■■□□□ 1.31
PCMT1-205ENST00000464889 TTF2Q9UNY4 1162 aaKnown RBP23.23■■□□□ 1.31
PCMT1-205ENST00000464889 ZNF646O15015 1829 aaPredicted RBP23.22■■□□□ 1.31
PCMT1-205ENST00000464889 ATP1A3P13637 1013 aa23.22■■□□□ 1.31
PCMT1-205ENST00000464889 FKBP1AP62942 108 aaKnown RBP23.22■■□□□ 1.31
PCMT1-205ENST00000464889 HSP90AA2PQ14568 343 aaPredicted RBP23.22■■□□□ 1.31
PCMT1-205ENST00000464889 TPD52L1Q16890 204 aaPredicted RBP23.22■■□□□ 1.31
PCMT1-205ENST00000464889 SLC4A8Q2Y0W8 1093 aa23.22■■□□□ 1.31
PCMT1-205ENST00000464889 PSMD14O00487 310 aa23.21■■□□□ 1.31
PCMT1-205ENST00000464889 USP49Q70CQ1 688 aa23.21■■□□□ 1.31
PCMT1-205ENST00000464889 KIAA0825Q8IV33 1275 aa23.21■■□□□ 1.31
PCMT1-205ENST00000464889 PDILTQ8N807 584 aa23.21■■□□□ 1.31
PCMT1-205ENST00000464889 ZNF287Q9HBT7 754 aa23.21■■□□□ 1.31
PCMT1-205ENST00000464889 PSME4Q14997 1843 aa23.21■■□□□ 1.31
PCMT1-205ENST00000464889 TSPY3P0CV98 308 aa23.21■■□□□ 1.31
PCMT1-205ENST00000464889 TSPY8P0CW00 308 aa23.21■■□□□ 1.31
PCMT1-205ENST00000464889 GPR75-ASB3A0A0A6YYF3 556 aa23.2■■□□□ 1.3
PCMT1-205ENST00000464889 WNT7AO00755 349 aa23.2■■□□□ 1.3
PCMT1-205ENST00000464889 TNNT1P13805 278 aa23.2■■□□□ 1.3
PCMT1-205ENST00000464889 PLCG2P16885 1265 aa23.2■■□□□ 1.3
PCMT1-205ENST00000464889 SFPQP23246 707 aaKnown RBP eCLIP23.2■■□□□ 1.37e-8■■□□□ 11.6
PCMT1-205ENST00000464889 BTDP43251 543 aa23.2■■□□□ 1.3
PCMT1-205ENST00000464889 SCNN1DP51172 638 aa23.2■■□□□ 1.3
PCMT1-205ENST00000464889 UBASH3AP57075 661 aa23.2■■□□□ 1.3
PCMT1-205ENST00000464889 CXCL9Q07325 125 aa23.2■■□□□ 1.3
PCMT1-205ENST00000464889 SLF2Q8IX21 1173 aa23.2■■□□□ 1.3
PCMT1-205ENST00000464889 ZNF444Q8N0Y2 327 aaPredicted RBP23.2■■□□□ 1.3
PCMT1-205ENST00000464889 MAP7D2Q96T17 732 aa23.2■■□□□ 1.3
PCMT1-205ENST00000464889 NRDCO43847 1150 aa23.2■■□□□ 1.3
PCMT1-205ENST00000464889 SERPINC1P01008 464 aa23.2■■□□□ 1.3
PCMT1-205ENST00000464889 SLFN14P0C7P3 912 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms