RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 KIF16BQ96L93 1317 aa11.74□□□□□ -0.53
APP-213ENST00000464867 MYH2Q9UKX2 1941 aa11.74□□□□□ -0.53
APP-213ENST00000464867 SLC15A5A6NIM6 579 aa11.73□□□□□ -0.53
APP-213ENST00000464867 PEX10O60683 326 aa11.73□□□□□ -0.53
APP-213ENST00000464867 PRDX5P30044 214 aa11.73□□□□□ -0.53
APP-213ENST00000464867 CYP2C19P33261 490 aa11.73□□□□□ -0.53
APP-213ENST00000464867 CAP2P40123 477 aa11.73□□□□□ -0.53
APP-213ENST00000464867 KCNQ1P51787 676 aa11.73□□□□□ -0.53
APP-213ENST00000464867 BACE1P56817 501 aa11.73□□□□□ -0.53
APP-213ENST00000464867 TFF2Q03403 129 aa11.73□□□□□ -0.53
APP-213ENST00000464867 PUM3Q15397 648 aaKnown RBP11.73□□□□□ -0.53
APP-213ENST00000464867 TWISTNBQ3B726 338 aaPredicted RBP11.73□□□□□ -0.53
APP-213ENST00000464867 HERVK_113Q902F9 699 aa11.73□□□□□ -0.53
APP-213ENST00000464867 GNL3LQ9NVN8 582 aaKnown RBP11.73□□□□□ -0.53
APP-213ENST00000464867 FLRT1Q9NZU1 646 aa11.73□□□□□ -0.53
APP-213ENST00000464867 FAM86C2PA6NEL3 165 aa11.72□□□□□ -0.53
APP-213ENST00000464867 C19orf81C9J6K1 198 aa11.72□□□□□ -0.53
APP-213ENST00000464867 PQBP1O60828 265 aaKnown RBP11.72□□□□□ -0.53
APP-213ENST00000464867 SLURP2P0DP57 97 aa11.72□□□□□ -0.53
APP-213ENST00000464867 ITGB8P26012 769 aa11.72□□□□□ -0.53
APP-213ENST00000464867 SLC19A1P41440 591 aa11.72□□□□□ -0.53
APP-213ENST00000464867 MTMR2Q13614 643 aa11.72□□□□□ -0.53
APP-213ENST00000464867 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.72□□□□□ -0.53
APP-213ENST00000464867 SLC44A5Q8NCS7 719 aa11.72□□□□□ -0.53
APP-213ENST00000464867 SLC6A16Q9GZN6 736 aa11.72□□□□□ -0.53
APP-213ENST00000464867 NDUFB9Q9Y6M9 179 aa11.72□□□□□ -0.53
APP-213ENST00000464867 GRXCR1A8MXD5 290 aa11.71□□□□□ -0.53
APP-213ENST00000464867 DCDC2CA8MYV0 355 aa11.71□□□□□ -0.53
APP-213ENST00000464867 ERC2O15083 957 aa11.71□□□□□ -0.53
APP-213ENST00000464867 SEPT4O43236 478 aa11.71□□□□□ -0.53
APP-213ENST00000464867 SLC5A1P13866 664 aa11.71□□□□□ -0.53
APP-213ENST00000464867 PPIGQ13427 754 aaKnown RBP eCLIP11.71□□□□□ -0.53
APP-213ENST00000464867 RALBP1Q15311 655 aa11.71□□□□□ -0.53
APP-213ENST00000464867 ANO1Q5XXA6 986 aa11.71□□□□□ -0.53
APP-213ENST00000464867 DPP9Q86TI2 863 aa11.71□□□□□ -0.53
APP-213ENST00000464867 ZGPATQ8N5A5 531 aaKnown RBP11.71□□□□□ -0.53
APP-213ENST00000464867 THAP11Q96EK4 314 aa11.71□□□□□ -0.53
APP-213ENST00000464867 SPSB2Q99619 263 aa11.71□□□□□ -0.53
APP-213ENST00000464867 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.71□□□□□ -0.53
APP-213ENST00000464867 WDR18Q9BV38 432 aa11.71□□□□□ -0.53
APP-213ENST00000464867 ADAMTS8Q9UP79 889 aa11.71□□□□□ -0.53
APP-213ENST00000464867 XIRP2A4UGR9 3374 aa11.71□□□□□ -0.54
APP-213ENST00000464867 FAM196BA6NMK8 535 aa11.7□□□□□ -0.54
APP-213ENST00000464867 PRR33A8MZF0 331 aa11.7□□□□□ -0.54
APP-213ENST00000464867 NRG2O14511 850 aaPredicted RBP11.7□□□□□ -0.54
APP-213ENST00000464867 HOXC6P09630 235 aa11.7□□□□□ -0.54
APP-213ENST00000464867 CYBAP13498 195 aa11.7□□□□□ -0.54
APP-213ENST00000464867 LRRC41Q15345 812 aa11.7□□□□□ -0.54
APP-213ENST00000464867 CSPP1Q1MSJ5 1256 aa11.7□□□□□ -0.54
APP-213ENST00000464867 LRRC24Q50LG9 513 aa11.7□□□□□ -0.54
APP-213ENST00000464867 PLA2G2CQ5R387 149 aa11.7□□□□□ -0.54
APP-213ENST00000464867 BEND3Q5T5X7 828 aa11.7□□□□□ -0.54
APP-213ENST00000464867 DZIP1Q86YF9 867 aaKnown RBP11.7□□□□□ -0.54
APP-213ENST00000464867 TRPV1Q8NER1 839 aa11.7□□□□□ -0.54
APP-213ENST00000464867 UIMC1Q96RL1 719 aa11.7□□□□□ -0.54
APP-213ENST00000464867 MTIF3Q9H2K0 278 aaKnown RBP11.7□□□□□ -0.54
APP-213ENST00000464867 COG5Q9UP83 839 aa11.7□□□□□ -0.54
APP-213ENST00000464867 SLC27A5Q9Y2P5 690 aa11.7□□□□□ -0.54
APP-213ENST00000464867 RABGAP1Q9Y3P9 1069 aa11.7□□□□□ -0.54
APP-213ENST00000464867 CHD9Q3L8U1 2897 aa11.69□□□□□ -0.54
APP-213ENST00000464867 USP17L10C9JJH3 530 aa11.69□□□□□ -0.54
APP-213ENST00000464867 PI4K2BG5E9Z4 385 aa11.69□□□□□ -0.54
APP-213ENST00000464867 TIMP1P01033 207 aa11.69□□□□□ -0.54
APP-213ENST00000464867 ASNSP08243 561 aa11.69□□□□□ -0.54
APP-213ENST00000464867 LIAT1Q6ZQX7 453 aa11.69□□□□□ -0.54
APP-213ENST00000464867 TRIM67Q6ZTA4 783 aa11.69□□□□□ -0.54
APP-213ENST00000464867 RNF180Q86T96 592 aa11.69□□□□□ -0.54
APP-213ENST00000464867 VGLL2Q8N8G2 317 aa11.69□□□□□ -0.54
APP-213ENST00000464867 LPIN2Q92539 896 aa11.69□□□□□ -0.54
APP-213ENST00000464867 C11orf16Q9NQ32 467 aa11.69□□□□□ -0.54
APP-213ENST00000464867 DDX4Q9NQI0 724 aaKnown RBP11.69□□□□□ -0.54
APP-213ENST00000464867 SLC5A4Q9NY91 659 aa11.69□□□□□ -0.54
APP-213ENST00000464867 HERC5Q9UII4 1024 aaKnown RBP11.69□□□□□ -0.54
APP-213ENST00000464867 PHF24Q9UPV7 400 aa11.69□□□□□ -0.54
APP-213ENST00000464867 SALL1Q9NSC2 1324 aa11.68□□□□□ -0.54
APP-213ENST00000464867 F6X3S4 739 aa11.68□□□□□ -0.54
APP-213ENST00000464867 APBB1O00213 710 aa11.68□□□□□ -0.54
APP-213ENST00000464867 APAF1O14727 1248 aa11.68□□□□□ -0.54
APP-213ENST00000464867 BTDP43251 543 aa11.68□□□□□ -0.54
APP-213ENST00000464867 NHLH1Q02575 133 aa11.68□□□□□ -0.54
APP-213ENST00000464867 OLFML2BQ68BL8 750 aa11.68□□□□□ -0.54
APP-213ENST00000464867 MFSD5Q6N075 450 aa11.68□□□□□ -0.54
APP-213ENST00000464867 PSRC1Q6PGN9 363 aaPredicted RBP11.68□□□□□ -0.54
APP-213ENST00000464867 TMEM199Q8N511 208 aa11.68□□□□□ -0.54
APP-213ENST00000464867 NPLOC4Q8TAT6 608 aa11.68□□□□□ -0.54
APP-213ENST00000464867 TSR2Q969E8 191 aaKnown RBP11.68□□□□□ -0.54
APP-213ENST00000464867 TOX2Q96NM4 488 aa11.68□□□□□ -0.54
APP-213ENST00000464867 KCNH6Q9H252 994 aa11.68□□□□□ -0.54
APP-213ENST00000464867 NKX2-4Q9H2Z4 354 aa11.68□□□□□ -0.54
APP-213ENST00000464867 DENND2AQ9ULE3 1009 aa11.68□□□□□ -0.54
APP-213ENST00000464867 RFX7Q2KHR2 1363 aa11.67□□□□□ -0.54
APP-213ENST00000464867 GAKO14976 1311 aa11.67□□□□□ -0.54
APP-213ENST00000464867 CD46P15529 392 aa11.67□□□□□ -0.54
APP-213ENST00000464867 FOXK2Q01167 660 aa11.67□□□□□ -0.54
APP-213ENST00000464867 GRB14Q14449 540 aa11.67□□□□□ -0.54
APP-213ENST00000464867 TMEM240Q5SV17 173 aa11.67□□□□□ -0.54
APP-213ENST00000464867 SPTY2D1Q68D10 685 aaPredicted RBP11.67□□□□□ -0.54
APP-213ENST00000464867 TRIM34Q9BYJ4 488 aa11.67□□□□□ -0.54
APP-213ENST00000464867 XPNPEP3Q9NQH7 507 aa11.67□□□□□ -0.54
APP-213ENST00000464867 LRRC37A2A6NM11 1700 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms