RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 CCT6AP40227 531 aaKnown RBP8.22□□□□□ -1.09
USP48-206ENST00000464577 AKAP17AQ02040 695 aaKnown RBP8.22□□□□□ -1.09
USP48-206ENST00000464577 CTDSPL2Q05D32 466 aa8.22□□□□□ -1.09
USP48-206ENST00000464577 KCNJ12Q14500 433 aa8.22□□□□□ -1.09
USP48-206ENST00000464577 IQCEQ6IPM2 695 aa8.22□□□□□ -1.09
USP48-206ENST00000464577 TADA2BQ86TJ2 420 aa8.22□□□□□ -1.09
USP48-206ENST00000464577 FANCBQ8NB91 859 aa8.22□□□□□ -1.09
USP48-206ENST00000464577 OR8K1Q8NGG5 319 aa8.22□□□□□ -1.09
USP48-206ENST00000464577 TTLL11Q8NHH1 800 aa8.22□□□□□ -1.09
USP48-206ENST00000464577 DNAJC7Q99615 494 aa8.22□□□□□ -1.09
USP48-206ENST00000464577 PHF20Q9BVI0 1012 aa8.22□□□□□ -1.09
USP48-206ENST00000464577 GEMIN8Q9NWZ8 242 aaKnown RBP8.22□□□□□ -1.09
USP48-206ENST00000464577 TAB2Q9NYJ8 693 aa8.22□□□□□ -1.09
USP48-206ENST00000464577 TACC3Q9Y6A5 838 aa8.22□□□□□ -1.09
USP48-206ENST00000464577 XDHP47989 1333 aa8.21□□□□□ -1.09
USP48-206ENST00000464577 PNPLA7Q6ZV29 1317 aa8.21□□□□□ -1.09
USP48-206ENST00000464577 BCORQ6W2J9 1755 aa8.21□□□□□ -1.1
USP48-206ENST00000464577 ERICH2A1L162 156 aa8.21□□□□□ -1.1
USP48-206ENST00000464577 ATP2B1P20020 1258 aa8.21□□□□□ -1.1
USP48-206ENST00000464577 KRT83P78385 493 aa8.21□□□□□ -1.1
USP48-206ENST00000464577 E2F4Q16254 413 aa8.21□□□□□ -1.1
USP48-206ENST00000464577 ZNF658Q5TYW1 1059 aaPredicted RBP8.21□□□□□ -1.1
USP48-206ENST00000464577 RRAGBQ5VZM2 374 aa8.21□□□□□ -1.1
USP48-206ENST00000464577 GBP6Q6ZN66 633 aa8.21□□□□□ -1.1
USP48-206ENST00000464577 SMYD4Q8IYR2 804 aaPredicted RBP8.21□□□□□ -1.1
USP48-206ENST00000464577 ZNF654Q8IZM8 581 aa8.21□□□□□ -1.1
USP48-206ENST00000464577 FAM76AQ8TAV0 307 aa8.21□□□□□ -1.1
USP48-206ENST00000464577 MMS19Q96T76 1030 aa8.21□□□□□ -1.1
USP48-206ENST00000464577 CRACR2AQ9BSW2 395 aa8.21□□□□□ -1.1
USP48-206ENST00000464577 RNF41Q9H4P4 317 aaPredicted RBP8.21□□□□□ -1.1
USP48-206ENST00000464577 PCDH11XQ9BZA7 1347 aa8.21□□□□□ -1.1
USP48-206ENST00000464577 PCDH11YQ9BZA8 1340 aa8.21□□□□□ -1.1
USP48-206ENST00000464577 PLCH1Q4KWH8 1693 aa8.2□□□□□ -1.1
USP48-206ENST00000464577 LGALS16A8MUM7 142 aa8.2□□□□□ -1.1
USP48-206ENST00000464577 H7C1D1 291 aa8.2□□□□□ -1.1
USP48-206ENST00000464577 MBD4O95243 580 aa8.2□□□□□ -1.1
USP48-206ENST00000464577 ATP1A1P05023 1023 aaKnown RBP8.2□□□□□ -1.1
USP48-206ENST00000464577 CDC25AP30304 524 aa8.2□□□□□ -1.1
USP48-206ENST00000464577 HERVK_113P62684 666 aa8.2□□□□□ -1.1
USP48-206ENST00000464577 ATP2C1P98194 919 aaPredicted RBP8.2□□□□□ -1.1
USP48-206ENST00000464577 PPFIA1Q13136 1202 aa8.2□□□□□ -1.1
USP48-206ENST00000464577 MEA1Q16626 185 aa8.2□□□□□ -1.1
USP48-206ENST00000464577 PDXDC2PQ6P474 469 aa8.2□□□□□ -1.1
USP48-206ENST00000464577 CCNI2Q6ZMN8 369 aaPredicted RBP8.2□□□□□ -1.1
USP48-206ENST00000464577 MMS22LQ6ZRQ5 1243 aa8.2□□□□□ -1.1
USP48-206ENST00000464577 NELFBQ8WX92 580 aa8.2□□□□□ -1.1
USP48-206ENST00000464577 TNFRSF25Q93038 417 aa8.2□□□□□ -1.1
USP48-206ENST00000464577 ZFP91Q96JP5 570 aaPredicted RBP8.2□□□□□ -1.1
USP48-206ENST00000464577 NACAP1Q9BZK3 213 aa8.2□□□□□ -1.1
USP48-206ENST00000464577 VPS16Q9H269 839 aa8.2□□□□□ -1.1
USP48-206ENST00000464577 INCENPQ9NQS7 918 aa8.2□□□□□ -1.1
USP48-206ENST00000464577 CAPN11Q9UMQ6 739 aa8.2□□□□□ -1.1
USP48-206ENST00000464577 GUCA1BQ9UMX6 200 aa8.2□□□□□ -1.1
USP48-206ENST00000464577 ATXN2Q99700 1313 aaKnown RBP8.2□□□□□ -1.1
USP48-206ENST00000464577 MYH8P13535 1937 aa8.2□□□□□ -1.1
USP48-206ENST00000464577 ANKRD18BA2A2Z9 1011 aa8.2□□□□□ -1.1
USP48-206ENST00000464577 GSG1L2A8MUP6 293 aa8.2□□□□□ -1.1
USP48-206ENST00000464577 AGPSO00116 658 aa8.2□□□□□ -1.1
USP48-206ENST00000464577 PRPF3O43395 683 aaKnown RBP8.2□□□□□ -1.1
USP48-206ENST00000464577 PDE8BO95263 885 aa8.2□□□□□ -1.1
USP48-206ENST00000464577 ITGA6P23229 1130 aa8.2□□□□□ -1.1
USP48-206ENST00000464577 EEF1GP26641 437 aaKnown RBP8.2□□□□□ -1.1
USP48-206ENST00000464577 CASP1P29466 404 aa8.2□□□□□ -1.1
USP48-206ENST00000464577 PHKA1P46020 1223 aa8.2□□□□□ -1.1
USP48-206ENST00000464577 UBXN1Q04323 297 aa8.2□□□□□ -1.1
USP48-206ENST00000464577 ITIH3Q06033 890 aa8.2□□□□□ -1.1
USP48-206ENST00000464577 MAP3K12Q12852 859 aa8.2□□□□□ -1.1
USP48-206ENST00000464577 SEMA3FQ13275 785 aa8.2□□□□□ -1.1
USP48-206ENST00000464577 NKX1-1Q15270 411 aaPredicted RBP8.2□□□□□ -1.1
USP48-206ENST00000464577 PKN1Q16512 942 aa8.2□□□□□ -1.1
USP48-206ENST00000464577 SWT1Q5T5J6 900 aaKnown RBP8.2□□□□□ -1.1
USP48-206ENST00000464577 LDHAL6AQ6ZMR3 332 aa8.2□□□□□ -1.1
USP48-206ENST00000464577 ZNF572Q7Z3I7 529 aaPredicted RBP8.2□□□□□ -1.1
USP48-206ENST00000464577 FNBP4Q8N3X1 1017 aaPredicted RBP8.2□□□□□ -1.1
USP48-206ENST00000464577 MB21D1Q8N884 522 aa8.2□□□□□ -1.1
USP48-206ENST00000464577 AENQ8WTP8 325 aaKnown RBP8.2□□□□□ -1.1
USP48-206ENST00000464577 SHISA4Q96DD7 197 aa8.2□□□□□ -1.1
USP48-206ENST00000464577 PURBQ96QR8 312 aaKnown RBP8.2□□□□□ -1.1
USP48-206ENST00000464577 CHP1Q99653 195 aa8.2□□□□□ -1.1
USP48-206ENST00000464577 SELENOOQ9BVL4 669 aa8.2□□□□□ -1.1
USP48-206ENST00000464577 LUC7L2Q9Y383 392 aaKnown RBP8.2□□□□□ -1.1
USP48-206ENST00000464577 PDS5AQ29RF7 1337 aaKnown RBP8.2□□□□□ -1.1
USP48-206ENST00000464577 TTC26A0AVF1 554 aa8.19□□□□□ -1.1
USP48-206ENST00000464577 GOLGA6CA6NDK9 693 aa8.19□□□□□ -1.1
USP48-206ENST00000464577 FAM205CA6NFA0 338 aa8.19□□□□□ -1.1
USP48-206ENST00000464577 A6NNZ2 444 aa8.19□□□□□ -1.1
USP48-206ENST00000464577 GOLGA8KD6RF30 607 aa8.19□□□□□ -1.1
USP48-206ENST00000464577 KRT86O43790 486 aa8.19□□□□□ -1.1
USP48-206ENST00000464577 GOLGA6DP0CG33 693 aa8.19□□□□□ -1.1
USP48-206ENST00000464577 CYLC1P35663 651 aaPredicted RBP8.19□□□□□ -1.1
USP48-206ENST00000464577 GGCXP38435 758 aa8.19□□□□□ -1.1
USP48-206ENST00000464577 TRAPPC10P48553 1259 aa8.19□□□□□ -1.1
USP48-206ENST00000464577 SEC23AQ15436 765 aa8.19□□□□□ -1.1
USP48-206ENST00000464577 TSR1Q2NL82 804 aaKnown RBP8.19□□□□□ -1.1
USP48-206ENST00000464577 TUBB8Q3ZCM7 444 aa8.19□□□□□ -1.1
USP48-206ENST00000464577 TTC38Q5R3I4 469 aa8.19□□□□□ -1.1
USP48-206ENST00000464577 CCDC122Q5T0U0 273 aa8.19□□□□□ -1.1
USP48-206ENST00000464577 MCTP2Q6DN12 878 aa8.19□□□□□ -1.1
USP48-206ENST00000464577 CCDC70Q6NSX1 233 aa8.19□□□□□ -1.1
USP48-206ENST00000464577 KIF6Q6ZMV9 814 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms