RNA–Protein interactions for RNA: ENST00000464547.5

ATF3-207, Transcript of activating transcription factor 3, humanhuman

TSL 1 (best)

Gene ATF3, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-207ENST00000464547 BIN1O00499 593 aa11.25□□□□□ -0.61
ATF3-207ENST00000464547 MDM2Q00987 491 aaPredicted RBP11.25□□□□□ -0.61
ATF3-207ENST00000464547 PNOCQ13519 176 aa11.25□□□□□ -0.61
ATF3-207ENST00000464547 DPCR1Q3MIW9 517 aa11.25□□□□□ -0.61
ATF3-207ENST00000464547 USP17L2Q6R6M4 530 aa11.25□□□□□ -0.61
ATF3-207ENST00000464547 SARM1Q6SZW1 724 aa11.25□□□□□ -0.61
ATF3-207ENST00000464547 HEATR3Q7Z4Q2 680 aa11.25□□□□□ -0.61
ATF3-207ENST00000464547 CNNM3Q8NE01 707 aa11.25□□□□□ -0.61
ATF3-207ENST00000464547 RNF39Q9H2S5 420 aa11.25□□□□□ -0.61
ATF3-207ENST00000464547 CPVLQ9H3G5 476 aa11.25□□□□□ -0.61
ATF3-207ENST00000464547 RNF216Q9NWF9 866 aaPredicted RBP11.25□□□□□ -0.61
ATF3-207ENST00000464547 MTMR4Q9NYA4 1195 aa11.25□□□□□ -0.61
ATF3-207ENST00000464547 SERTAD1Q9UHV2 236 aa11.25□□□□□ -0.61
ATF3-207ENST00000464547 SERPINB13Q9UIV8 391 aa11.25□□□□□ -0.61
ATF3-207ENST00000464547 C10orf71Q711Q0 1435 aa11.25□□□□□ -0.61
ATF3-207ENST00000464547 BECN2A8MW95 431 aa11.24□□□□□ -0.61
ATF3-207ENST00000464547 M0R2N6 131 aa11.24□□□□□ -0.61
ATF3-207ENST00000464547 FOXN1O15353 648 aa11.24□□□□□ -0.61
ATF3-207ENST00000464547 ACTN4O43707 911 aaKnown RBP11.24□□□□□ -0.61
ATF3-207ENST00000464547 C21orf2O43822 256 aa11.24□□□□□ -0.61
ATF3-207ENST00000464547 ZNF500O60304 480 aaPredicted RBP11.24□□□□□ -0.61
ATF3-207ENST00000464547 HLA-DOAP06340 250 aa11.24□□□□□ -0.61
ATF3-207ENST00000464547 BAG6P46379 1132 aa11.24□□□□□ -0.61
ATF3-207ENST00000464547 ATP2C1P98194 919 aaPredicted RBP11.24□□□□□ -0.61
ATF3-207ENST00000464547 ZRSR1Q15695 479 aaKnown RBP11.24□□□□□ -0.61
ATF3-207ENST00000464547 GALNT17Q6IS24 598 aa11.24□□□□□ -0.61
ATF3-207ENST00000464547 USP49Q70CQ1 688 aa11.24□□□□□ -0.61
ATF3-207ENST00000464547 FOXP4Q8IVH2 680 aaPredicted RBP11.24□□□□□ -0.61
ATF3-207ENST00000464547 FAM177A1Q8N128 213 aaPredicted RBP11.24□□□□□ -0.61
ATF3-207ENST00000464547 LRRC47Q8N1G4 583 aaKnown RBP11.24□□□□□ -0.61
ATF3-207ENST00000464547 AOPEPQ8N6M6 819 aa11.24□□□□□ -0.61
ATF3-207ENST00000464547 SPC24Q8NBT2 197 aa11.24□□□□□ -0.61
ATF3-207ENST00000464547 CCDC148Q8NFR7 591 aa11.24□□□□□ -0.61
ATF3-207ENST00000464547 FERMT2Q96AC1 680 aa11.24□□□□□ -0.61
ATF3-207ENST00000464547 ZNF830Q96NB3 372 aaPredicted RBP11.24□□□□□ -0.61
ATF3-207ENST00000464547 IDI2Q9BXS1 227 aa11.24□□□□□ -0.61
ATF3-207ENST00000464547 TRIM5Q9C035 493 aa11.24□□□□□ -0.61
ATF3-207ENST00000464547 EHD4Q9H223 541 aa11.24□□□□□ -0.61
ATF3-207ENST00000464547 BARHL2Q9NY43 387 aa11.24□□□□□ -0.61
ATF3-207ENST00000464547 FAM198AQ9UFP1 575 aa11.24□□□□□ -0.61
ATF3-207ENST00000464547 PCDHA6Q9UN73 950 aa11.24□□□□□ -0.61
ATF3-207ENST00000464547 PCDHA8Q9Y5H6 950 aa11.24□□□□□ -0.61
ATF3-207ENST00000464547 SCN9AQ15858 1988 aa11.23□□□□□ -0.61
ATF3-207ENST00000464547 YDJCA8MPS7 323 aa11.23□□□□□ -0.61
ATF3-207ENST00000464547 POLR2DO15514 142 aaKnown RBP11.23□□□□□ -0.61
ATF3-207ENST00000464547 PPIP5K2O43314 1243 aa11.23□□□□□ -0.61
ATF3-207ENST00000464547 NPM3O75607 178 aaKnown RBP11.23□□□□□ -0.61
ATF3-207ENST00000464547 TPM3P06753 285 aa11.23□□□□□ -0.61
ATF3-207ENST00000464547 PRR29P0C7W0 189 aa11.23□□□□□ -0.61
ATF3-207ENST00000464547 SNHG28P0DPA3 235 aa11.23□□□□□ -0.61
ATF3-207ENST00000464547 PDHBP11177 359 aa11.23□□□□□ -0.61
ATF3-207ENST00000464547 CDC25BP30305 580 aa11.23□□□□□ -0.61
ATF3-207ENST00000464547 RBM5P52756 815 aaKnown RBP eCLIP11.23□□□□□ -0.61
ATF3-207ENST00000464547 CACNB3P54284 484 aa11.23□□□□□ -0.61
ATF3-207ENST00000464547 PTGDRQ13258 359 aa11.23□□□□□ -0.61
ATF3-207ENST00000464547 ISM2Q6H9L7 571 aa11.23□□□□□ -0.61
ATF3-207ENST00000464547 SH3BP5LQ7L8J4 393 aa11.23□□□□□ -0.61
ATF3-207ENST00000464547 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.23□□□□□ -0.61
ATF3-207ENST00000464547 DEFB132Q7Z7B7 95 aa11.23□□□□□ -0.61
ATF3-207ENST00000464547 CLEC10AQ8IUN9 316 aa11.23□□□□□ -0.61
ATF3-207ENST00000464547 C4orf32Q8N8J7 132 aa11.23□□□□□ -0.61
ATF3-207ENST00000464547 RASGRP4Q8TDF6 673 aa11.23□□□□□ -0.61
ATF3-207ENST00000464547 RRP36Q96EU6 259 aaKnown RBP11.23□□□□□ -0.61
ATF3-207ENST00000464547 PIGSQ96S52 555 aa11.23□□□□□ -0.61
ATF3-207ENST00000464547 RIOX1Q9H6W3 641 aa11.23□□□□□ -0.61
ATF3-207ENST00000464547 CLIP2Q9UDT6 1046 aa11.23□□□□□ -0.61
ATF3-207ENST00000464547 SERPINA10Q9UK55 444 aa11.23□□□□□ -0.61
ATF3-207ENST00000464547 A0A087X0B3 334 aa11.22□□□□□ -0.61
ATF3-207ENST00000464547 GOLGA6L6A8MZA4 724 aa11.22□□□□□ -0.61
ATF3-207ENST00000464547 TTLL1O95922 423 aa11.22□□□□□ -0.61
ATF3-207ENST00000464547 SLURP2P0DP57 97 aa11.22□□□□□ -0.61
ATF3-207ENST00000464547 DPEP1P16444 411 aa11.22□□□□□ -0.61
ATF3-207ENST00000464547 MCM7P33993 719 aa11.22□□□□□ -0.61
ATF3-207ENST00000464547 EIF6P56537 245 aaKnown RBP11.22□□□□□ -0.61
ATF3-207ENST00000464547 TCP10Q12799 353 aa11.22□□□□□ -0.61
ATF3-207ENST00000464547 SF3B2Q13435 895 aaKnown RBP11.22□□□□□ -0.61
ATF3-207ENST00000464547 NCAPHQ15003 741 aa11.22□□□□□ -0.61
ATF3-207ENST00000464547 POSTNQ15063 836 aa11.22□□□□□ -0.61
ATF3-207ENST00000464547 IL17AQ16552 155 aa11.22□□□□□ -0.61
ATF3-207ENST00000464547 GRIPAP1Q4V328 841 aa11.22□□□□□ -0.61
ATF3-207ENST00000464547 ASPRV1Q53RT3 343 aa11.22□□□□□ -0.61
ATF3-207ENST00000464547 CCDC93Q567U6 631 aa11.22□□□□□ -0.61
ATF3-207ENST00000464547 FRMPD2Q68DX3 1309 aaPredicted RBP11.22□□□□□ -0.61
ATF3-207ENST00000464547 TTLL6Q8N841 843 aa11.22□□□□□ -0.61
ATF3-207ENST00000464547 SYMPKQ92797 1274 aaKnown RBP11.22□□□□□ -0.61
ATF3-207ENST00000464547 EPSTI1Q96J88 318 aa11.22□□□□□ -0.61
ATF3-207ENST00000464547 CCDC17Q96LX7 622 aa11.22□□□□□ -0.61
ATF3-207ENST00000464547 UBA5Q9GZZ9 404 aa11.22□□□□□ -0.61
ATF3-207ENST00000464547 DHX36Q9H2U1 1008 aaKnown RBP11.22□□□□□ -0.61
ATF3-207ENST00000464547 DNAJC18Q9H819 358 aa11.22□□□□□ -0.61
ATF3-207ENST00000464547 TTC12Q9H892 705 aaPredicted RBP11.22□□□□□ -0.61
ATF3-207ENST00000464547 VAT1LQ9HCJ6 419 aa11.22□□□□□ -0.61
ATF3-207ENST00000464547 HOOK1Q9UJC3 728 aaKnown RBP11.22□□□□□ -0.61
ATF3-207ENST00000464547 MAN1B1Q9UKM7 699 aa11.22□□□□□ -0.61
ATF3-207ENST00000464547 PCDHA5Q9Y5H7 936 aa11.22□□□□□ -0.61
ATF3-207ENST00000464547 CCDC194A0A1B0GVG4 234 aa11.21□□□□□ -0.61
ATF3-207ENST00000464547 VWA3AA6NCI4 1184 aa11.21□□□□□ -0.61
ATF3-207ENST00000464547 DDTLA6NHG4 134 aaPredicted RBP11.21□□□□□ -0.61
ATF3-207ENST00000464547 SMTNL1A8MU46 457 aa11.21□□□□□ -0.61
ATF3-207ENST00000464547 MPHOSPH10O00566 681 aaKnown RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms