RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 NEDD4P46934 1319 aa10.11□□□□□ -0.79
HPS4-208ENST00000464362 CIAO1O76071 339 aa10.11□□□□□ -0.79
HPS4-208ENST00000464362 CACNB1Q02641 598 aaPredicted RBP10.11□□□□□ -0.79
HPS4-208ENST00000464362 LRRC41Q15345 812 aa10.11□□□□□ -0.79
HPS4-208ENST00000464362 CALCRLQ16602 461 aa10.11□□□□□ -0.79
HPS4-208ENST00000464362 NCAPH2Q6IBW4 605 aa10.11□□□□□ -0.79
HPS4-208ENST00000464362 TOGARAM2Q6ZUX3 1019 aa10.11□□□□□ -0.79
HPS4-208ENST00000464362 BICD1Q96G01 975 aa10.11□□□□□ -0.79
HPS4-208ENST00000464362 STRBPQ96SI9 672 aaKnown RBP10.11□□□□□ -0.79
HPS4-208ENST00000464362 ANKRD2Q9GZV1 360 aa10.11□□□□□ -0.79
HPS4-208ENST00000464362 GDAQ9Y2T3 454 aa10.11□□□□□ -0.79
HPS4-208ENST00000464362 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.11□□□□□ -0.79
HPS4-208ENST00000464362 PNMA6AP0CW24 399 aaPredicted RBP10.11□□□□□ -0.79
HPS4-208ENST00000464362 MRPL12P52815 198 aaKnown RBP10.11□□□□□ -0.79
HPS4-208ENST00000464362 TRIM14Q14142 442 aa10.11□□□□□ -0.79
HPS4-208ENST00000464362 MTF1Q14872 753 aa10.11□□□□□ -0.79
HPS4-208ENST00000464362 LLGL1Q15334 1064 aa10.11□□□□□ -0.79
HPS4-208ENST00000464362 TTC31Q49AM3 519 aaPredicted RBP10.11□□□□□ -0.79
HPS4-208ENST00000464362 KCTD16Q68DU8 428 aa10.11□□□□□ -0.79
HPS4-208ENST00000464362 CCDC65Q8IXS2 484 aa10.11□□□□□ -0.79
HPS4-208ENST00000464362 DYNLL2Q96FJ2 89 aa10.11□□□□□ -0.79
HPS4-208ENST00000464362 NYXQ9GZU5 481 aa10.11□□□□□ -0.79
HPS4-208ENST00000464362 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.11□□□□□ -0.79
HPS4-208ENST00000464362 DDX41Q9UJV9 622 aaKnown RBP10.11□□□□□ -0.79
HPS4-208ENST00000464362 CDC23Q9UJX2 597 aa10.11□□□□□ -0.79
HPS4-208ENST00000464362 CCNL1Q9UK58 526 aaPredicted RBP10.11□□□□□ -0.79
HPS4-208ENST00000464362 PCDHB13Q9Y5F0 798 aa10.11□□□□□ -0.79
HPS4-208ENST00000464362 HEG1Q9ULI3 1381 aa10.11□□□□□ -0.79
HPS4-208ENST00000464362 DDX39AO00148 427 aaKnown RBP10.11□□□□□ -0.79
HPS4-208ENST00000464362 TEX33O43247 280 aa10.11□□□□□ -0.79
HPS4-208ENST00000464362 FMNL1O95466 1100 aaPredicted RBP10.11□□□□□ -0.79
HPS4-208ENST00000464362 PRR29P0C7W0 189 aa10.11□□□□□ -0.79
HPS4-208ENST00000464362 KLHL30Q0D2K2 578 aa10.11□□□□□ -0.79
HPS4-208ENST00000464362 IFI16Q16666 785 aaKnown RBP10.11□□□□□ -0.79
HPS4-208ENST00000464362 TBC1D5Q92609 795 aa10.11□□□□□ -0.79
HPS4-208ENST00000464362 EYA3Q99504 573 aa10.11□□□□□ -0.79
HPS4-208ENST00000464362 CEP152O94986 1710 aa10.11□□□□□ -0.79
HPS4-208ENST00000464362 PTPRMP28827 1452 aa10.11□□□□□ -0.79
HPS4-208ENST00000464362 GUCY1A2P33402 732 aa10.1□□□□□ -0.79
HPS4-208ENST00000464362 CETN2P41208 172 aa10.1□□□□□ -0.79
HPS4-208ENST00000464362 IQCB1Q15051 598 aa10.1□□□□□ -0.79
HPS4-208ENST00000464362 DIXDC1Q155Q3 683 aa10.1□□□□□ -0.79
HPS4-208ENST00000464362 ARMCX5Q6P1M9 558 aa10.1□□□□□ -0.79
HPS4-208ENST00000464362 CCDC174Q6PII3 467 aa10.1□□□□□ -0.79
HPS4-208ENST00000464362 SMIM5Q71RC9 77 aa10.1□□□□□ -0.79
HPS4-208ENST00000464362 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.1□□□□□ -0.79
HPS4-208ENST00000464362 NCOA3Q9Y6Q9 1424 aa10.1□□□□□ -0.79
HPS4-208ENST00000464362 UBE2Q2LH0YL09 131 aa10.1□□□□□ -0.79
HPS4-208ENST00000464362 CETN3O15182 167 aa10.1□□□□□ -0.79
HPS4-208ENST00000464362 NMT2O60551 498 aa10.1□□□□□ -0.79
HPS4-208ENST00000464362 USP17L8P0C7I0 530 aa10.1□□□□□ -0.79
HPS4-208ENST00000464362 SLC9C1Q4G0N8 1177 aa10.1□□□□□ -0.79
HPS4-208ENST00000464362 GRIPAP1Q4V328 841 aa10.1□□□□□ -0.79
HPS4-208ENST00000464362 RBM26Q5T8P6 1007 aaKnown RBP10.1□□□□□ -0.79
HPS4-208ENST00000464362 DHX40Q8IX18 779 aaKnown RBP10.1□□□□□ -0.79
HPS4-208ENST00000464362 MRRFQ96E11 262 aaKnown RBP10.1□□□□□ -0.79
HPS4-208ENST00000464362 TAOK3Q9H2K8 898 aa10.1□□□□□ -0.79
HPS4-208ENST00000464362 SENP2Q9HC62 589 aa10.1□□□□□ -0.79
HPS4-208ENST00000464362 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.1□□□□□ -0.795e-7■□□□□ 11.2
HPS4-208ENST00000464362 FAN1Q9Y2M0 1017 aa10.1□□□□□ -0.79
HPS4-208ENST00000464362 BAZ2BQ9UIF8 2168 aaKnown RBP10.1□□□□□ -0.79
HPS4-208ENST00000464362 SLFN14P0C7P3 912 aa10.1□□□□□ -0.79
HPS4-208ENST00000464362 SHC4Q6S5L8 630 aa10.1□□□□□ -0.79
HPS4-208ENST00000464362 USP49Q70CQ1 688 aa10.1□□□□□ -0.79
HPS4-208ENST00000464362 SRGAP1Q7Z6B7 1085 aa10.1□□□□□ -0.79
HPS4-208ENST00000464362 NOX5Q96PH1 765 aa10.1□□□□□ -0.79
HPS4-208ENST00000464362 ZNF609O15014 1411 aa10.1□□□□□ -0.79
HPS4-208ENST00000464362 LOC102724428A0A0B4J2F2 783 aa10.1□□□□□ -0.79
HPS4-208ENST00000464362 FAM205CA6NFA0 338 aa10.1□□□□□ -0.79
HPS4-208ENST00000464362 GCOM1H8Y6P7 765 aaPredicted RBP10.1□□□□□ -0.79
HPS4-208ENST00000464362 MYZAPP0CAP1 466 aa10.1□□□□□ -0.79
HPS4-208ENST00000464362 ABCB4P21439 1286 aa10.1□□□□□ -0.79
HPS4-208ENST00000464362 CRKLP46109 303 aaKnown RBP10.1□□□□□ -0.79
HPS4-208ENST00000464362 SIK1P57059 783 aa10.1□□□□□ -0.79
HPS4-208ENST00000464362 TNNC1P63316 161 aa10.1□□□□□ -0.79
HPS4-208ENST00000464362 GTF2IP78347 998 aa10.1□□□□□ -0.79
HPS4-208ENST00000464362 MFSD14BQ5SR56 506 aa10.1□□□□□ -0.79
HPS4-208ENST00000464362 NAA35Q5VZE5 725 aa10.1□□□□□ -0.79
HPS4-208ENST00000464362 UHMK1Q8TAS1 419 aaKnown RBP10.1□□□□□ -0.79
HPS4-208ENST00000464362 CCDC114Q96M63 670 aa10.1□□□□□ -0.79
HPS4-208ENST00000464362 GPR101Q96P66 508 aaPredicted RBP10.1□□□□□ -0.79
HPS4-208ENST00000464362 TUBGCP2Q9BSJ2 902 aa10.1□□□□□ -0.79
HPS4-208ENST00000464362 FOXP1Q9H334 677 aaPredicted RBP10.1□□□□□ -0.79
HPS4-208ENST00000464362 ARHGAP31Q2M1Z3 1444 aa10.1□□□□□ -0.79
HPS4-208ENST00000464362 GTPBP6O43824 516 aaPredicted RBP10.09□□□□□ -0.79
HPS4-208ENST00000464362 POTEJP0CG39 1038 aa10.09□□□□□ -0.79
HPS4-208ENST00000464362 SLC1A4P43007 532 aa10.09□□□□□ -0.79
HPS4-208ENST00000464362 SARM1Q6SZW1 724 aa10.09□□□□□ -0.79
HPS4-208ENST00000464362 TRIML1Q8N9V2 468 aa10.09□□□□□ -0.79
HPS4-208ENST00000464362 RABGGTAQ92696 567 aa10.09□□□□□ -0.79
HPS4-208ENST00000464362 MYO3AQ8NEV4 1616 aa10.09□□□□□ -0.79
HPS4-208ENST00000464362 TUBBP07437 444 aa10.09□□□□□ -0.79
HPS4-208ENST00000464362 CYP2D6P10635 497 aa10.09□□□□□ -0.79
HPS4-208ENST00000464362 EEF2P13639 858 aaKnown RBP10.09□□□□□ -0.79
HPS4-208ENST00000464362 GBP2P32456 591 aaPredicted RBP10.09□□□□□ -0.79
HPS4-208ENST00000464362 SCNN1DP51172 638 aa10.09□□□□□ -0.79
HPS4-208ENST00000464362 PLCB3Q01970 1234 aa10.09□□□□□ -0.79
HPS4-208ENST00000464362 CYP4A11Q02928 519 aa10.09□□□□□ -0.79
HPS4-208ENST00000464362 COL9A3Q14050 684 aaPredicted RBP10.09□□□□□ -0.79
HPS4-208ENST00000464362 BRD3Q15059 726 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms