RNA–Protein interactions for RNA: ENST00000464290.5

CRAT-208, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 3

Gene CRAT, Length 867 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-208ENST00000464290 GOPCQ9HD26 462 aa17.75■□□□□ 0.43
CRAT-208ENST00000464290 SMC3Q9UQE7 1217 aa17.75■□□□□ 0.43
CRAT-208ENST00000464290 BAZ2BQ9UIF8 2168 aaKnown RBP17.74■□□□□ 0.43
CRAT-208ENST00000464290 FRMPD2Q68DX3 1309 aaPredicted RBP17.74■□□□□ 0.43
CRAT-208ENST00000464290 TRPM7Q96QT4 1865 aa17.74■□□□□ 0.43
CRAT-208ENST00000464290 PTPDC1A2A3K4 754 aa17.74■□□□□ 0.43
CRAT-208ENST00000464290 SPDYE5A6NIY4 337 aa17.74■□□□□ 0.43
CRAT-208ENST00000464290 TRIM75PA6NK02 468 aa17.74■□□□□ 0.43
CRAT-208ENST00000464290 USP17L10C9JJH3 530 aa17.74■□□□□ 0.43
CRAT-208ENST00000464290 TOMM70O94826 608 aa17.74■□□□□ 0.43
CRAT-208ENST00000464290 GNAQP50148 359 aa17.74■□□□□ 0.43
CRAT-208ENST00000464290 BACE1P56817 501 aa17.74■□□□□ 0.43
CRAT-208ENST00000464290 DGKZQ13574 1117 aa17.74■□□□□ 0.43
CRAT-208ENST00000464290 MTMR2Q13614 643 aa17.74■□□□□ 0.43
CRAT-208ENST00000464290 ASPRV1Q53RT3 343 aa17.74■□□□□ 0.43
CRAT-208ENST00000464290 KCTD1Q719H9 257 aa17.74■□□□□ 0.43
CRAT-208ENST00000464290 CCDC82Q8N4S0 544 aa17.74■□□□□ 0.43
CRAT-208ENST00000464290 RBM46Q8TBY0 533 aaKnown RBP17.74■□□□□ 0.43
CRAT-208ENST00000464290 PHKBQ93100 1093 aa17.74■□□□□ 0.43
CRAT-208ENST00000464290 DDX11Q96FC9 970 aa17.74■□□□□ 0.43
CRAT-208ENST00000464290 CPVLQ9H3G5 476 aa17.74■□□□□ 0.43
CRAT-208ENST00000464290 GPCPD1Q9NPB8 672 aa17.74■□□□□ 0.43
CRAT-208ENST00000464290 KLRF2D3W0D1 207 aa17.73■□□□□ 0.43
CRAT-208ENST00000464290 FDPSP14324 419 aaKnown RBP17.73■□□□□ 0.43
CRAT-208ENST00000464290 GJB2P29033 226 aa17.73■□□□□ 0.43
CRAT-208ENST00000464290 SLC1A4P43007 532 aa17.73■□□□□ 0.43
CRAT-208ENST00000464290 PPATQ06203 517 aa17.73■□□□□ 0.43
CRAT-208ENST00000464290 CCDC96Q2M329 555 aa17.73■□□□□ 0.43
CRAT-208ENST00000464290 TTBK2Q6IQ55 1244 aa17.73■□□□□ 0.43
CRAT-208ENST00000464290 CPLX2Q6PUV4 134 aaKnown RBP17.73■□□□□ 0.43
CRAT-208ENST00000464290 ERO1BQ86YB8 467 aa17.73■□□□□ 0.43
CRAT-208ENST00000464290 EMILIN3Q9NT22 766 aa17.73■□□□□ 0.43
CRAT-208ENST00000464290 CYTH3O43739 400 aa17.72■□□□□ 0.43
CRAT-208ENST00000464290 CDKL5O76039 1030 aa17.72■□□□□ 0.43
CRAT-208ENST00000464290 BMP3P12645 472 aa17.72■□□□□ 0.43
CRAT-208ENST00000464290 GJA5P36382 358 aa17.72■□□□□ 0.43
CRAT-208ENST00000464290 USP14P54578 494 aa17.72■□□□□ 0.43
CRAT-208ENST00000464290 GPATCH4Q5T3I0 446 aaKnown RBP17.72■□□□□ 0.43
CRAT-208ENST00000464290 SLC10A4Q96EP9 437 aa17.72■□□□□ 0.43
CRAT-208ENST00000464290 LZTS2Q9BRK4 669 aa17.72■□□□□ 0.43
CRAT-208ENST00000464290 SLC26A6Q9BXS9 759 aa17.72■□□□□ 0.43
CRAT-208ENST00000464290 UBA5Q9GZZ9 404 aa17.72■□□□□ 0.43
CRAT-208ENST00000464290 CNTNAP5Q8WYK1 1306 aa17.72■□□□□ 0.43
CRAT-208ENST00000464290 C19orf81C9J6K1 198 aa17.71■□□□□ 0.43
CRAT-208ENST00000464290 IRF6O14896 467 aa17.71■□□□□ 0.43
CRAT-208ENST00000464290 FMNL1O95466 1100 aaPredicted RBP17.71■□□□□ 0.43
CRAT-208ENST00000464290 DDIT3P35638 169 aa17.71■□□□□ 0.43
CRAT-208ENST00000464290 HMGN5P82970 282 aaKnown RBP17.71■□□□□ 0.43
CRAT-208ENST00000464290 SSRP1Q08945 709 aaKnown RBP17.71■□□□□ 0.43
CRAT-208ENST00000464290 PPIL2Q13356 520 aa17.71■□□□□ 0.43
CRAT-208ENST00000464290 FAM83BQ5T0W9 1011 aa17.71■□□□□ 0.43
CRAT-208ENST00000464290 OPTNQ96CV9 577 aa17.71■□□□□ 0.43
CRAT-208ENST00000464290 OTUD5Q96G74 571 aa17.71■□□□□ 0.43
CRAT-208ENST00000464290 C12orf42Q96LP6 360 aa17.71■□□□□ 0.43
CRAT-208ENST00000464290 CWC22Q9HCG8 908 aaKnown RBP17.71■□□□□ 0.43
CRAT-208ENST00000464290 ORC3Q9UBD5 711 aaPredicted RBP17.71■□□□□ 0.43
CRAT-208ENST00000464290 hCG_1642624A0A1W2PR95 340 aa17.7■□□□□ 0.42
CRAT-208ENST00000464290 PRPF3O43395 683 aaKnown RBP17.7■□□□□ 0.42
CRAT-208ENST00000464290 SMARCA1P28370 1054 aa17.7■□□□□ 0.42
CRAT-208ENST00000464290 SLC16A2P36021 539 aa17.7■□□□□ 0.42
CRAT-208ENST00000464290 HMGCS2P54868 508 aa17.7■□□□□ 0.42
CRAT-208ENST00000464290 SH3D19Q5HYK7 790 aa17.7■□□□□ 0.42
CRAT-208ENST00000464290 LPAR1Q92633 364 aa17.7■□□□□ 0.42
CRAT-208ENST00000464290 SPZ1Q9BXG8 430 aa17.7■□□□□ 0.42
CRAT-208ENST00000464290 RIOX1Q9H6W3 641 aa17.7■□□□□ 0.42
CRAT-208ENST00000464290 KCNH4Q9UQ05 1017 aa17.7■□□□□ 0.42
CRAT-208ENST00000464290 V9GY48 417 aaPredicted RBP17.7■□□□□ 0.42
CRAT-208ENST00000464290 STK36Q9NRP7 1315 aa17.7■□□□□ 0.42
CRAT-208ENST00000464290 TMEM232C9JQI7 657 aa17.69■□□□□ 0.42
CRAT-208ENST00000464290 CXCL11O14625 94 aa17.69■□□□□ 0.42
CRAT-208ENST00000464290 WDR46O15213 610 aaKnown RBP17.69■□□□□ 0.42
CRAT-208ENST00000464290 VCAM1P19320 739 aa17.69■□□□□ 0.42
CRAT-208ENST00000464290 HUNKP57058 714 aa17.69■□□□□ 0.42
CRAT-208ENST00000464290 BTNL9Q6UXG8 535 aa17.69■□□□□ 0.42
CRAT-208ENST00000464290 RNF26Q9BY78 433 aaPredicted RBP17.69■□□□□ 0.42
CRAT-208ENST00000464290 VAT1LQ9HCJ6 419 aa17.69■□□□□ 0.42
CRAT-208ENST00000464290 ISY1Q9ULR0 285 aaKnown RBP17.69■□□□□ 0.42
CRAT-208ENST00000464290 A0A0G2JLL6 359 aaPredicted RBP17.68■□□□□ 0.42
CRAT-208ENST00000464290 FSTL1Q12841 308 aa17.68■□□□□ 0.42
CRAT-208ENST00000464290 PKN1Q16512 942 aa17.68■□□□□ 0.42
CRAT-208ENST00000464290 PRRT2Q7Z6L0 340 aaPredicted RBP17.68■□□□□ 0.42
CRAT-208ENST00000464290 TRIM22Q8IYM9 498 aa17.68■□□□□ 0.42
CRAT-208ENST00000464290 ADGRF4Q8IZF3 695 aa17.68■□□□□ 0.42
CRAT-208ENST00000464290 PIBF1Q8WXW3 757 aa17.68■□□□□ 0.42
CRAT-208ENST00000464290 WNK4Q96J92 1243 aa17.68■□□□□ 0.42
CRAT-208ENST00000464290 AIFM3Q96NN9 605 aa17.68■□□□□ 0.42
CRAT-208ENST00000464290 RPAP3Q9H6T3 665 aaPredicted RBP17.68■□□□□ 0.42
CRAT-208ENST00000464290 JMJD4Q9H9V9 463 aa17.68■□□□□ 0.42
CRAT-208ENST00000464290 PTPRFP10586 1907 aa17.67■□□□□ 0.42
CRAT-208ENST00000464290 PLA2G6O60733 806 aa17.67■□□□□ 0.42
CRAT-208ENST00000464290 DEXIO95424 95 aa17.67■□□□□ 0.42
CRAT-208ENST00000464290 SYDE2Q5VT97 1194 aa17.67■□□□□ 0.42
CRAT-208ENST00000464290 SAPCD2Q86UD0 394 aa17.67■□□□□ 0.42
CRAT-208ENST00000464290 FAM184AQ8NB25 1140 aa17.67■□□□□ 0.42
CRAT-208ENST00000464290 MTMR8Q96EF0 704 aa17.67■□□□□ 0.42
CRAT-208ENST00000464290 FBXO28Q9NVF7 368 aa17.67■□□□□ 0.42
CRAT-208ENST00000464290 TMOD4Q9NZQ9 345 aa17.67■□□□□ 0.42
CRAT-208ENST00000464290 SYT1P21579 422 aa17.66■□□□□ 0.42
CRAT-208ENST00000464290 AKAP17AQ02040 695 aaKnown RBP17.66■□□□□ 0.42
CRAT-208ENST00000464290 MOGSQ13724 837 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms