RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 NT5DC1Q5TFE4 455 aa8.14□□□□□ -1.11
CLSTN1-204ENST00000464286 ZBTB33Q86T24 672 aa8.14□□□□□ -1.11
CLSTN1-204ENST00000464286 C10orf67Q8IYJ2 551 aa8.14□□□□□ -1.11
CLSTN1-204ENST00000464286 CCDC116Q8IYX3 515 aa8.14□□□□□ -1.11
CLSTN1-204ENST00000464286 AFAP1L1Q8TED9 768 aa8.14□□□□□ -1.11
CLSTN1-204ENST00000464286 LTV1Q96GA3 475 aaPredicted RBP8.14□□□□□ -1.11
CLSTN1-204ENST00000464286 MYCBPQ99417 103 aaPredicted RBP8.14□□□□□ -1.11
CLSTN1-204ENST00000464286 MTA3Q9BTC8 594 aa8.14□□□□□ -1.11
CLSTN1-204ENST00000464286 ST7Q9NRC1 585 aa8.14□□□□□ -1.11
CLSTN1-204ENST00000464286 WWC3Q9ULE0 1092 aa8.14□□□□□ -1.11
CLSTN1-204ENST00000464286 AMOTL2Q9Y2J4 779 aa8.14□□□□□ -1.11
CLSTN1-204ENST00000464286 GPSM3Q9Y4H4 160 aa8.14□□□□□ -1.11
CLSTN1-204ENST00000464286 CLIC4Q9Y696 253 aa8.14□□□□□ -1.11
CLSTN1-204ENST00000464286 RGPD8O14715 1765 aaPredicted RBP8.14□□□□□ -1.11
CLSTN1-204ENST00000464286 CAMTA1Q9Y6Y1 1673 aa8.14□□□□□ -1.11
CLSTN1-204ENST00000464286 NFAT5O94916 1531 aa8.13□□□□□ -1.11
CLSTN1-204ENST00000464286 KDM6AO15550 1401 aaPredicted RBP8.13□□□□□ -1.11
CLSTN1-204ENST00000464286 CPDO75976 1380 aa8.13□□□□□ -1.11
CLSTN1-204ENST00000464286 ATXN2Q99700 1313 aaKnown RBP8.13□□□□□ -1.11
CLSTN1-204ENST00000464286 DDX60Q8IY21 1712 aaKnown RBP8.13□□□□□ -1.11
CLSTN1-204ENST00000464286 A0A1B0GTH6 734 aa8.13□□□□□ -1.11
CLSTN1-204ENST00000464286 CCDC196A0A1B0GTZ2 297 aa8.13□□□□□ -1.11
CLSTN1-204ENST00000464286 SHTN1A0MZ66 631 aa8.13□□□□□ -1.11
CLSTN1-204ENST00000464286 ZNF213O14771 459 aa8.13□□□□□ -1.11
CLSTN1-204ENST00000464286 PRC1O43663 620 aa8.13□□□□□ -1.11
CLSTN1-204ENST00000464286 OPA1O60313 960 aa8.13□□□□□ -1.11
CLSTN1-204ENST00000464286 WDHD1O75717 1129 aaPredicted RBP8.13□□□□□ -1.11
CLSTN1-204ENST00000464286 SEC31AO94979 1220 aaKnown RBP8.13□□□□□ -1.11
CLSTN1-204ENST00000464286 IPO7O95373 1038 aaKnown RBP8.13□□□□□ -1.11
CLSTN1-204ENST00000464286 IFIT1P09914 478 aaKnown RBP8.13□□□□□ -1.11
CLSTN1-204ENST00000464286 ZNF18P17022 549 aa8.13□□□□□ -1.11
CLSTN1-204ENST00000464286 XBP1P17861 261 aa8.13□□□□□ -1.11
CLSTN1-204ENST00000464286 GUCY2CP25092 1073 aa8.13□□□□□ -1.11
CLSTN1-204ENST00000464286 NOP2P46087 812 aaKnown RBP8.13□□□□□ -1.11
CLSTN1-204ENST00000464286 RCAN1P53805 252 aa8.13□□□□□ -1.11
CLSTN1-204ENST00000464286 CORO7P57737 925 aa8.13□□□□□ -1.11
CLSTN1-204ENST00000464286 ST5P78524 1137 aa8.13□□□□□ -1.11
CLSTN1-204ENST00000464286 TFCP2Q12800 502 aa8.13□□□□□ -1.11
CLSTN1-204ENST00000464286 POSTNQ15063 836 aa8.13□□□□□ -1.11
CLSTN1-204ENST00000464286 PPP2R5BQ15173 497 aa8.13□□□□□ -1.11
CLSTN1-204ENST00000464286 TTF1Q15361 905 aaPredicted RBP8.13□□□□□ -1.11
CLSTN1-204ENST00000464286 SPATA1Q5VX52 437 aa8.13□□□□□ -1.11
CLSTN1-204ENST00000464286 STOX1Q6ZVD7 989 aa8.13□□□□□ -1.11
CLSTN1-204ENST00000464286 MICALCLQ6ZW33 695 aa8.13□□□□□ -1.11
CLSTN1-204ENST00000464286 RASGRP2Q7LDG7 609 aa8.13□□□□□ -1.11
CLSTN1-204ENST00000464286 TMEM139Q8IV31 216 aa8.13□□□□□ -1.11
CLSTN1-204ENST00000464286 TRIM22Q8IYM9 498 aa8.13□□□□□ -1.11
CLSTN1-204ENST00000464286 MEIOBQ8N635 442 aa8.13□□□□□ -1.11
CLSTN1-204ENST00000464286 TC2NQ8N9U0 490 aa8.13□□□□□ -1.11
CLSTN1-204ENST00000464286 SMARCC1Q92922 1105 aaPredicted RBP8.13□□□□□ -1.11
CLSTN1-204ENST00000464286 DHX58Q96C10 678 aa8.13□□□□□ -1.11
CLSTN1-204ENST00000464286 IQCDQ96DY2 449 aa8.13□□□□□ -1.11
CLSTN1-204ENST00000464286 KAZALD1Q96I82 304 aa8.13□□□□□ -1.11
CLSTN1-204ENST00000464286 CEP89Q96ST8 783 aa8.13□□□□□ -1.11
CLSTN1-204ENST00000464286 CRACR2AQ9BSW2 395 aa8.13□□□□□ -1.11
CLSTN1-204ENST00000464286 ALG1Q9BT22 464 aa8.13□□□□□ -1.11
CLSTN1-204ENST00000464286 FANCLQ9NW38 375 aa8.13□□□□□ -1.11
CLSTN1-204ENST00000464286 ZNHIT6Q9NWK9 470 aaKnown RBP8.13□□□□□ -1.11
CLSTN1-204ENST00000464286 TLR7Q9NYK1 1049 aaKnown RBP8.13□□□□□ -1.11
CLSTN1-204ENST00000464286 L1RE1Q9UN81 338 aa8.13□□□□□ -1.11
CLSTN1-204ENST00000464286 ANGEL1Q9UNK9 670 aaKnown RBP8.13□□□□□ -1.11
CLSTN1-204ENST00000464286 ARHGAP23Q9P227 1491 aa8.13□□□□□ -1.11
CLSTN1-204ENST00000464286 PARP4Q9UKK3 1724 aaKnown RBP8.12□□□□□ -1.11
CLSTN1-204ENST00000464286 SOBPA7XYQ1 873 aa8.12□□□□□ -1.11
CLSTN1-204ENST00000464286 VGLL3A8MV65 326 aa8.12□□□□□ -1.11
CLSTN1-204ENST00000464286 GOLIM4O00461 696 aa8.12□□□□□ -1.11
CLSTN1-204ENST00000464286 EBAG9O00559 213 aa8.12□□□□□ -1.11
CLSTN1-204ENST00000464286 WIPF1O43516 503 aa8.12□□□□□ -1.11
CLSTN1-204ENST00000464286 SASH3O75995 380 aa8.12□□□□□ -1.11
CLSTN1-204ENST00000464286 POLR3DP05423 398 aaPredicted RBP8.12□□□□□ -1.11
CLSTN1-204ENST00000464286 FDPSP14324 419 aaKnown RBP8.12□□□□□ -1.11
CLSTN1-204ENST00000464286 IARSP41252 1262 aaKnown RBP8.12□□□□□ -1.11
CLSTN1-204ENST00000464286 RFX5P48382 616 aaPredicted RBP8.12□□□□□ -1.11
CLSTN1-204ENST00000464286 METAP2P50579 478 aaKnown RBP eCLIP8.12□□□□□ -1.11
CLSTN1-204ENST00000464286 GUCY1B3Q02153 619 aa8.12□□□□□ -1.11
CLSTN1-204ENST00000464286 APBA1Q02410 837 aa8.12□□□□□ -1.11
CLSTN1-204ENST00000464286 PTPN12Q05209 780 aaKnown RBP8.12□□□□□ -1.11
CLSTN1-204ENST00000464286 MCM6Q14566 821 aa8.12□□□□□ -1.11
CLSTN1-204ENST00000464286 CASP8Q14790 479 aa8.12□□□□□ -1.11
CLSTN1-204ENST00000464286 TMEM259Q4ZIN3 620 aa8.12□□□□□ -1.11
CLSTN1-204ENST00000464286 C6orf118Q5T5N4 469 aa8.12□□□□□ -1.11
CLSTN1-204ENST00000464286 TMED8Q6PL24 325 aaPredicted RBP8.12□□□□□ -1.11
CLSTN1-204ENST00000464286 CYP26C1Q6V0L0 522 aa8.12□□□□□ -1.11
CLSTN1-204ENST00000464286 MMS22LQ6ZRQ5 1243 aa8.12□□□□□ -1.11
CLSTN1-204ENST00000464286 ZNF662Q6ZS27 426 aa8.12□□□□□ -1.11
CLSTN1-204ENST00000464286 B4GALNT4Q76KP1 1039 aa8.12□□□□□ -1.11
CLSTN1-204ENST00000464286 DDX46Q7L014 1031 aaKnown RBP8.12□□□□□ -1.11
CLSTN1-204ENST00000464286 ADAM32Q8TC27 787 aa8.12□□□□□ -1.11
CLSTN1-204ENST00000464286 APPBP2Q92624 585 aa8.12□□□□□ -1.11
CLSTN1-204ENST00000464286 SLC10A4Q96EP9 437 aa8.12□□□□□ -1.11
CLSTN1-204ENST00000464286 KCTD15Q96SI1 283 aaPredicted RBP8.12□□□□□ -1.11
CLSTN1-204ENST00000464286 DBNDD2Q9BQY9 259 aa8.12□□□□□ -1.11
CLSTN1-204ENST00000464286 PDE11AQ9HCR9 933 aa8.12□□□□□ -1.11
CLSTN1-204ENST00000464286 RMND1Q9NWS8 449 aa8.12□□□□□ -1.11
CLSTN1-204ENST00000464286 JRKLQ9Y4A0 524 aa8.12□□□□□ -1.11
CLSTN1-204ENST00000464286 NFE2L3Q9Y4A8 694 aa8.12□□□□□ -1.11
CLSTN1-204ENST00000464286 C4AP0C0L4 1744 aa8.12□□□□□ -1.11
CLSTN1-204ENST00000464286 C4BP0C0L5 1744 aa8.12□□□□□ -1.11
CLSTN1-204ENST00000464286 MYH7P12883 1935 aa8.11□□□□□ -1.11
CLSTN1-204ENST00000464286 MAST3O60307 1309 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms