RNA–Protein interactions for RNA: ENST00000464082.1

CD46-211, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-211ENST00000464082 TONSLQ96HA7 1378 aa7.6□□□□□ -1.19
CD46-211ENST00000464082 SYNGAP1Q96PV0 1343 aa7.6□□□□□ -1.19
CD46-211ENST00000464082 PRKCSHP14314 528 aaPredicted RBP7.6□□□□□ -1.19
CD46-211ENST00000464082 ITIH2P19823 946 aa7.6□□□□□ -1.19
CD46-211ENST00000464082 AAMPQ13685 434 aa7.6□□□□□ -1.19
CD46-211ENST00000464082 TTLL10Q6ZVT0 673 aa7.6□□□□□ -1.19
CD46-211ENST00000464082 SYDE1Q6ZW31 735 aaPredicted RBP7.6□□□□□ -1.19
CD46-211ENST00000464082 SIAH1Q8IUQ4 282 aa7.6□□□□□ -1.19
CD46-211ENST00000464082 FANCD2OSQ96PS1 177 aa7.6□□□□□ -1.19
CD46-211ENST00000464082 DUSP23Q9BVJ7 150 aa7.6□□□□□ -1.19
CD46-211ENST00000464082 MKNK2Q9HBH9 465 aa7.6□□□□□ -1.19
CD46-211ENST00000464082 PARP4Q9UKK3 1724 aaKnown RBP7.6□□□□□ -1.19
CD46-211ENST00000464082 KIAA0232Q92628 1395 aa7.59□□□□□ -1.19
CD46-211ENST00000464082 NFAT5O94916 1531 aa7.59□□□□□ -1.19
CD46-211ENST00000464082 TMEM265A0A087WTH1 108 aa7.59□□□□□ -1.19
CD46-211ENST00000464082 KRT1P04264 644 aa7.59□□□□□ -1.19
CD46-211ENST00000464082 EHHADHQ08426 723 aa7.59□□□□□ -1.19
CD46-211ENST00000464082 VPS72Q15906 364 aa7.59□□□□□ -1.19
CD46-211ENST00000464082 ARHGAP27Q6ZUM4 889 aa7.59□□□□□ -1.19
CD46-211ENST00000464082 SMYD4Q8IYR2 804 aaPredicted RBP7.59□□□□□ -1.19
CD46-211ENST00000464082 PIDD1Q9HB75 910 aa7.59□□□□□ -1.19
CD46-211ENST00000464082 DISC1Q9NRI5 854 aa7.59□□□□□ -1.19
CD46-211ENST00000464082 RGPD2P0DJD1 1756 aa7.59□□□□□ -1.2
CD46-211ENST00000464082 BRD4O60885 1362 aaPredicted RBP7.59□□□□□ -1.2
CD46-211ENST00000464082 EVC2Q86UK5 1308 aa7.58□□□□□ -1.2
CD46-211ENST00000464082 KIF20BQ96Q89 1820 aa7.58□□□□□ -1.2
CD46-211ENST00000464082 C1QTNF9P0C862 333 aa7.58□□□□□ -1.2
CD46-211ENST00000464082 ALKBH2Q6NS38 261 aa7.58□□□□□ -1.2
CD46-211ENST00000464082 PRR23BQ6ZRT6 265 aa7.58□□□□□ -1.2
CD46-211ENST00000464082 TESK2Q96S53 571 aa7.58□□□□□ -1.2
CD46-211ENST00000464082 ZC3H12CQ9C0D7 883 aaKnown RBP7.58□□□□□ -1.2
CD46-211ENST00000464082 ZNF576Q9H609 170 aa7.58□□□□□ -1.2
CD46-211ENST00000464082 CCDC86Q9H6F5 360 aaKnown RBP7.58□□□□□ -1.2
CD46-211ENST00000464082 CTNND2Q9UQB3 1225 aa7.58□□□□□ -1.2
CD46-211ENST00000464082 RGPD1P0DJD0 1748 aa7.58□□□□□ -1.2
CD46-211ENST00000464082 PEAK1Q9H792 1746 aa7.58□□□□□ -1.2
CD46-211ENST00000464082 CPDO75976 1380 aa7.58□□□□□ -1.2
CD46-211ENST00000464082 FZD6O60353 706 aa7.57□□□□□ -1.2
CD46-211ENST00000464082 GALNT12Q8IXK2 581 aa7.57□□□□□ -1.2
CD46-211ENST00000464082 DDX54Q8TDD1 881 aaKnown RBP7.57□□□□□ -1.2
CD46-211ENST00000464082 PPP1R16BQ96T49 567 aa7.57□□□□□ -1.2
CD46-211ENST00000464082 CARD11Q9BXL7 1154 aa7.57□□□□□ -1.2
CD46-211ENST00000464082 TNKS2Q9H2K2 1166 aa7.57□□□□□ -1.2
CD46-211ENST00000464082 BTG4Q9NY30 223 aa7.57□□□□□ -1.2
CD46-211ENST00000464082 LRRC37A3O60309 1634 aa7.56□□□□□ -1.2
CD46-211ENST00000464082 COL5A2P05997 1499 aaPredicted RBP7.56□□□□□ -1.2
CD46-211ENST00000464082 RNGTTO60942 597 aaKnown RBP7.56□□□□□ -1.2
CD46-211ENST00000464082 HCLS1P14317 486 aaPredicted RBP7.56□□□□□ -1.2
CD46-211ENST00000464082 ID3Q02535 119 aa7.56□□□□□ -1.2
CD46-211ENST00000464082 ZP2Q05996 745 aa7.56□□□□□ -1.2
CD46-211ENST00000464082 TTLL4Q14679 1199 aa7.56□□□□□ -1.2
CD46-211ENST00000464082 CHRNA2Q15822 529 aa7.56□□□□□ -1.2
CD46-211ENST00000464082 HEXIM2Q96MH2 286 aaKnown RBP7.56□□□□□ -1.2
CD46-211ENST00000464082 ATXN3LQ9H3M9 355 aa7.56□□□□□ -1.2
CD46-211ENST00000464082 CCDC87Q9NVE4 849 aa7.56□□□□□ -1.2
CD46-211ENST00000464082 SPATA31A5Q5VU36 1347 aa7.55□□□□□ -1.2
CD46-211ENST00000464082 TTC21BQ7Z4L5 1316 aa7.55□□□□□ -1.2
CD46-211ENST00000464082 SPATA31A7Q8IWB4 1347 aa7.55□□□□□ -1.2
CD46-211ENST00000464082 ZNF862O60290 1169 aa7.55□□□□□ -1.2
CD46-211ENST00000464082 NPR3P17342 541 aa7.55□□□□□ -1.2
CD46-211ENST00000464082 USP5P45974 858 aa7.55□□□□□ -1.2
CD46-211ENST00000464082 ZC3H6P61129 1189 aaKnown RBP7.55□□□□□ -1.2
CD46-211ENST00000464082 IKZF1Q13422 519 aa7.55□□□□□ -1.2
CD46-211ENST00000464082 GJD3Q8N144 294 aa7.55□□□□□ -1.2
CD46-211ENST00000464082 PCDHGC5Q9Y5F6 944 aa7.55□□□□□ -1.2
CD46-211ENST00000464082 CLSPNQ9HAW4 1339 aa7.54□□□□□ -1.2
CD46-211ENST00000464082 RREB1Q92766 1687 aa7.54□□□□□ -1.2
CD46-211ENST00000464082 ABCC6O95255 1503 aa7.54□□□□□ -1.2
CD46-211ENST00000464082 ST20-MTHFSA0A0A6YYL1 179 aa7.54□□□□□ -1.2
CD46-211ENST00000464082 GCP02774 474 aa7.54□□□□□ -1.2
CD46-211ENST00000464082 AP3B2Q13367 1082 aa7.54□□□□□ -1.2
CD46-211ENST00000464082 USPL1Q5W0Q7 1092 aa7.54□□□□□ -1.2
CD46-211ENST00000464082 TOP6BLQ8N6T0 577 aa7.54□□□□□ -1.2
CD46-211ENST00000464082 PRDM11Q9NQV5 511 aa7.54□□□□□ -1.2
CD46-211ENST00000464082 SHANK3Q9BYB0 1731 aa7.54□□□□□ -1.2
CD46-211ENST00000464082 A0A1W2PP64 1363 aa7.54□□□□□ -1.2
CD46-211ENST00000464082 USP31Q70CQ4 1352 aa7.54□□□□□ -1.2
CD46-211ENST00000464082 USP47Q96K76 1375 aa7.54□□□□□ -1.2
CD46-211ENST00000464082 SPATA31A1Q5TZJ5 1347 aa7.53□□□□□ -1.2
CD46-211ENST00000464082 OVOS2A0A0J9YW53 1432 aa7.53□□□□□ -1.2
CD46-211ENST00000464082 OVOS2Q6IE36 1432 aa7.53□□□□□ -1.2
CD46-211ENST00000464082 ANKRD26Q9UPS8 1709 aa7.53□□□□□ -1.2
CD46-211ENST00000464082 MAP2P11137 1827 aaKnown RBP7.53□□□□□ -1.2
CD46-211ENST00000464082 NEFMP07197 916 aa7.53□□□□□ -1.2
CD46-211ENST00000464082 SLFN14P0C7P3 912 aa7.53□□□□□ -1.2
CD46-211ENST00000464082 ITPKAP23677 461 aa7.53□□□□□ -1.2
CD46-211ENST00000464082 ZNF157P51786 506 aaPredicted RBP7.53□□□□□ -1.2
CD46-211ENST00000464082 MPZL3Q6UWV2 235 aa7.53□□□□□ -1.2
CD46-211ENST00000464082 FAM214BQ7L5A3 538 aa7.53□□□□□ -1.2
CD46-211ENST00000464082 PCGF6Q9BYE7 350 aa7.53□□□□□ -1.2
CD46-211ENST00000464082 SLC12A5Q9H2X9 1139 aa7.53□□□□□ -1.2
CD46-211ENST00000464082 SNX11Q9Y5W9 270 aa7.53□□□□□ -1.2
CD46-211ENST00000464082 KTN1Q86UP2 1357 aaKnown RBP7.53□□□□□ -1.2
CD46-211ENST00000464082 FAM208AQ9UK61 1670 aaKnown RBP7.53□□□□□ -1.2
CD46-211ENST00000464082 KAT6BQ8WYB5 2073 aa7.53□□□□□ -1.2
CD46-211ENST00000464082 TTC21AQ8NDW8 1320 aa7.52□□□□□ -1.2
CD46-211ENST00000464082 EDC4Q6P2E9 1401 aaKnown RBP7.52□□□□□ -1.2
CD46-211ENST00000464082 NUP188Q5SRE5 1749 aa7.52□□□□□ -1.2
CD46-211ENST00000464082 AATKQ6ZMQ8 1374 aa7.52□□□□□ -1.21
CD46-211ENST00000464082 GLI1P08151 1106 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms