RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 AKR1A1P14550 325 aa17.51■□□□□ 0.39
SMC1A-204ENST00000463684 ICA1Q05084 483 aa17.51■□□□□ 0.39
SMC1A-204ENST00000463684 TMEM132BQ14DG7 1078 aa17.51■□□□□ 0.39
SMC1A-204ENST00000463684 AACSQ86V21 672 aa17.51■□□□□ 0.39
SMC1A-204ENST00000463684 NUP133Q8WUM0 1156 aa17.51■□□□□ 0.39
SMC1A-204ENST00000463684 TOX2Q96NM4 488 aa17.51■□□□□ 0.39
SMC1A-204ENST00000463684 TSEN34Q9BSV6 310 aaKnown RBP17.51■□□□□ 0.39
SMC1A-204ENST00000463684 ZNF576Q9H609 170 aa17.51■□□□□ 0.39
SMC1A-204ENST00000463684 CNPY2Q9Y2B0 182 aa17.51■□□□□ 0.39
SMC1A-204ENST00000463684 EVX2Q03828 476 aa17.5■□□□□ 0.39
SMC1A-204ENST00000463684 FAAP100Q0VG06 881 aa17.5■□□□□ 0.39
SMC1A-204ENST00000463684 ANKRD33Q7Z3H0 272 aa17.5■□□□□ 0.39
SMC1A-204ENST00000463684 ERC1Q8IUD2 1116 aa17.5■□□□□ 0.39
SMC1A-204ENST00000463684 RIOX2Q8IUF8 465 aa17.5■□□□□ 0.39
SMC1A-204ENST00000463684 SLC44A5Q8NCS7 719 aa17.5■□□□□ 0.39
SMC1A-204ENST00000463684 SDR42E1Q8WUS8 393 aa17.5■□□□□ 0.39
SMC1A-204ENST00000463684 TIFAQ96CG3 184 aa17.5■□□□□ 0.39
SMC1A-204ENST00000463684 DCP1AQ9NPI6 582 aaPredicted RBP17.5■□□□□ 0.39
SMC1A-204ENST00000463684 STARD7Q9NQZ5 370 aa17.5■□□□□ 0.39
SMC1A-204ENST00000463684 MYO5AQ9Y4I1 1855 aaKnown RBP17.5■□□□□ 0.39
SMC1A-204ENST00000463684 CDH23Q9H251 3354 aa17.49■□□□□ 0.39
SMC1A-204ENST00000463684 PDE6AP16499 860 aa17.49■□□□□ 0.39
SMC1A-204ENST00000463684 TAL1P17542 331 aaPredicted RBP17.49■□□□□ 0.39
SMC1A-204ENST00000463684 COL9A1P20849 921 aa17.49■□□□□ 0.39
SMC1A-204ENST00000463684 STAT3P40763 770 aa17.49■□□□□ 0.39
SMC1A-204ENST00000463684 ZNF792Q3KQV3 632 aa17.49■□□□□ 0.39
SMC1A-204ENST00000463684 CCDC174Q6PII3 467 aa17.49■□□□□ 0.39
SMC1A-204ENST00000463684 SIAH1Q8IUQ4 282 aa17.49■□□□□ 0.39
SMC1A-204ENST00000463684 DYNLL2Q96FJ2 89 aa17.49■□□□□ 0.39
SMC1A-204ENST00000463684 CCDC17Q96LX7 622 aa17.49■□□□□ 0.39
SMC1A-204ENST00000463684 GAS2L1Q99501 681 aaPredicted RBP17.49■□□□□ 0.39
SMC1A-204ENST00000463684 ZNF532Q9HCE3 1301 aa17.48■□□□□ 0.39
SMC1A-204ENST00000463684 TIMP1P01033 207 aa17.48■□□□□ 0.39
SMC1A-204ENST00000463684 ZNF865P0CJ78 1059 aaPredicted RBP17.48■□□□□ 0.39
SMC1A-204ENST00000463684 CYP2D6P10635 497 aa17.48■□□□□ 0.39
SMC1A-204ENST00000463684 AKR1B1P15121 316 aa17.48■□□□□ 0.39
SMC1A-204ENST00000463684 COPB2P35606 906 aa17.48■□□□□ 0.39
SMC1A-204ENST00000463684 ACLYP53396 1101 aa17.48■□□□□ 0.39
SMC1A-204ENST00000463684 FTSJ3Q8IY81 847 aaKnown RBP17.48■□□□□ 0.39
SMC1A-204ENST00000463684 USP38Q8NB14 1042 aa17.48■□□□□ 0.39
SMC1A-204ENST00000463684 FAM184BQ9ULE4 1060 aa17.48■□□□□ 0.39
SMC1A-204ENST00000463684 ADAMTS5Q9UNA0 930 aa17.48■□□□□ 0.39
SMC1A-204ENST00000463684 MOXD2PA6NHM9 499 aa17.47■□□□□ 0.39
SMC1A-204ENST00000463684 CCDC129Q6ZRS4 1044 aa17.47■□□□□ 0.39
SMC1A-204ENST00000463684 CLEC10AQ8IUN9 316 aa17.47■□□□□ 0.39
SMC1A-204ENST00000463684 ITPRIPQ8IWB1 547 aa17.47■□□□□ 0.39
SMC1A-204ENST00000463684 AMOTL1Q8IY63 956 aa17.47■□□□□ 0.39
SMC1A-204ENST00000463684 PPM1EQ8WY54 764 aa17.47■□□□□ 0.39
SMC1A-204ENST00000463684 VWA5AO00534 786 aa17.46■□□□□ 0.39
SMC1A-204ENST00000463684 RAD21O60216 631 aa17.46■□□□□ 0.39
SMC1A-204ENST00000463684 ADAMTS4O75173 837 aa17.46■□□□□ 0.39
SMC1A-204ENST00000463684 PPIGQ13427 754 aaKnown RBP eCLIP17.46■□□□□ 0.39
SMC1A-204ENST00000463684 KCNA10Q16322 511 aa17.46■□□□□ 0.39
SMC1A-204ENST00000463684 MFSD5Q6N075 450 aa17.46■□□□□ 0.39
SMC1A-204ENST00000463684 LCORLQ8N3X6 602 aa17.46■□□□□ 0.39
SMC1A-204ENST00000463684 MSL3Q8N5Y2 521 aaKnown RBP17.46■□□□□ 0.39
SMC1A-204ENST00000463684 ATXN2LQ8WWM7 1075 aaKnown RBP17.46■□□□□ 0.39
SMC1A-204ENST00000463684 LENG1Q96BZ8 264 aaPredicted RBP17.46■□□□□ 0.39
SMC1A-204ENST00000463684 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.46■□□□□ 0.397e-6■□□□□ 10.6
SMC1A-204ENST00000463684 GOPCQ9HD26 462 aa17.46■□□□□ 0.39
SMC1A-204ENST00000463684 ATP8A2Q9NTI2 1148 aa17.46■□□□□ 0.39
SMC1A-204ENST00000463684 FBXO28Q9NVF7 368 aa17.46■□□□□ 0.39
SMC1A-204ENST00000463684 EXOC6BQ9Y2D4 811 aa17.46■□□□□ 0.39
SMC1A-204ENST00000463684 MROH7Q68CQ1 1323 aa17.46■□□□□ 0.38
SMC1A-204ENST00000463684 ROBO3Q96MS0 1386 aa17.45■□□□□ 0.38
SMC1A-204ENST00000463684 A0A0G2JMZ2 1700 aa17.45■□□□□ 0.38
SMC1A-204ENST00000463684 GOLIM4O00461 696 aa17.45■□□□□ 0.38
SMC1A-204ENST00000463684 EEF2P13639 858 aaKnown RBP17.45■□□□□ 0.38
SMC1A-204ENST00000463684 CDK8P49336 464 aa17.45■□□□□ 0.38
SMC1A-204ENST00000463684 HSP90AB4PQ58FF6 505 aa17.45■□□□□ 0.38
SMC1A-204ENST00000463684 VTI1AQ96AJ9 217 aa17.45■□□□□ 0.38
SMC1A-204ENST00000463684 DDX11Q96FC9 970 aa17.45■□□□□ 0.38
SMC1A-204ENST00000463684 GLT1D1Q96MS3 346 aa17.45■□□□□ 0.38
SMC1A-204ENST00000463684 DNAJC2Q99543 621 aaKnown RBP17.45■□□□□ 0.38
SMC1A-204ENST00000463684 ARMT1Q9H993 441 aa17.45■□□□□ 0.38
SMC1A-204ENST00000463684 KANSL2Q9H9L4 492 aa17.45■□□□□ 0.38
SMC1A-204ENST00000463684 PPP1R9AQ9ULJ8 1098 aa17.45■□□□□ 0.38
SMC1A-204ENST00000463684 SYNRGQ9UMZ2 1314 aa17.45■□□□□ 0.38
SMC1A-204ENST00000463684 TCRBV5S4A2TA0A5A2 114 aa17.44■□□□□ 0.38
SMC1A-204ENST00000463684 AKNAD1Q5T1N1 836 aa17.44■□□□□ 0.38
SMC1A-204ENST00000463684 TMEM199Q8N511 208 aa17.44■□□□□ 0.38
SMC1A-204ENST00000463684 KLHDC9Q8NEP7 349 aa17.44■□□□□ 0.38
SMC1A-204ENST00000463684 DDRGK1Q96HY6 314 aa17.44■□□□□ 0.38
SMC1A-204ENST00000463684 SPC25Q9HBM1 224 aa17.44■□□□□ 0.38
SMC1A-204ENST00000463684 IL1RAPL2Q9NP60 686 aa17.44■□□□□ 0.38
SMC1A-204ENST00000463684 ELP1O95163 1332 aa17.44■□□□□ 0.38
SMC1A-204ENST00000463684 DUSP11O75319 330 aaKnown RBP17.43■□□□□ 0.38
SMC1A-204ENST00000463684 TMEM240Q5SV17 173 aa17.43■□□□□ 0.38
SMC1A-204ENST00000463684 C12orf60Q5U649 245 aa17.43■□□□□ 0.38
SMC1A-204ENST00000463684 CEP85Q6P2H3 762 aa17.43■□□□□ 0.38
SMC1A-204ENST00000463684 CLASRPQ8N2M8 674 aaKnown RBP17.43■□□□□ 0.38
SMC1A-204ENST00000463684 PCSK9Q8NBP7 692 aaKnown RBP17.43■□□□□ 0.38
SMC1A-204ENST00000463684 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.43■□□□□ 0.38
SMC1A-204ENST00000463684 ASB2Q96Q27 587 aa17.43■□□□□ 0.38
SMC1A-204ENST00000463684 PBX4Q9BYU1 374 aa17.43■□□□□ 0.38
SMC1A-204ENST00000463684 PRDM12Q9H4Q4 367 aa17.43■□□□□ 0.38
SMC1A-204ENST00000463684 ZHX1Q9UKY1 873 aaPredicted RBP17.43■□□□□ 0.38
SMC1A-204ENST00000463684 TBX21Q9UL17 535 aa17.43■□□□□ 0.38
SMC1A-204ENST00000463684 ZNF214Q9UL59 606 aaPredicted RBP17.43■□□□□ 0.38
SMC1A-204ENST00000463684 SYNGAP1Q96PV0 1343 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms