RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 MGAMO43451 1857 aa20.89■□□□□ 0.93
VPS52-214ENST00000463486 A0A0G2JMZ2 1700 aa20.89■□□□□ 0.93
VPS52-214ENST00000463486 FLOT1O75955 427 aa20.88■□□□□ 0.93
VPS52-214ENST00000463486 NECTIN1Q15223 517 aa20.88■□□□□ 0.93
VPS52-214ENST00000463486 SLFN13Q68D06 897 aa20.88■□□□□ 0.93
VPS52-214ENST00000463486 RASGRP2Q7LDG7 609 aa20.88■□□□□ 0.93
VPS52-214ENST00000463486 REPS2Q8NFH8 660 aa20.88■□□□□ 0.93
VPS52-214ENST00000463486 ANKS1AQ92625 1134 aa20.88■□□□□ 0.93
VPS52-214ENST00000463486 GMCL1Q96IK5 515 aa20.88■□□□□ 0.93
VPS52-214ENST00000463486 TTC14Q96N46 770 aa20.88■□□□□ 0.93
VPS52-214ENST00000463486 PAGR1Q9BTK6 254 aa20.88■□□□□ 0.93
VPS52-214ENST00000463486 GJD2Q9UKL4 321 aa20.88■□□□□ 0.93
VPS52-214ENST00000463486 GABRQQ9UN88 632 aa20.88■□□□□ 0.93
VPS52-214ENST00000463486 PTCH2Q9Y6C5 1203 aa20.88■□□□□ 0.93
VPS52-214ENST00000463486 PRMT2P55345 433 aa20.87■□□□□ 0.93
VPS52-214ENST00000463486 PRKCZQ05513 592 aa20.87■□□□□ 0.93
VPS52-214ENST00000463486 ZKSCAN3Q9BRR0 538 aa20.87■□□□□ 0.93
VPS52-214ENST00000463486 PPP1R9AQ9ULJ8 1098 aa20.87■□□□□ 0.93
VPS52-214ENST00000463486 E7EWF7 191 aa20.86■□□□□ 0.93
VPS52-214ENST00000463486 TOP1P11387 765 aaKnown RBP20.86■□□□□ 0.93
VPS52-214ENST00000463486 COL9A3Q14050 684 aaPredicted RBP20.86■□□□□ 0.93
VPS52-214ENST00000463486 KIAA1211Q6ZU35 1233 aa20.86■□□□□ 0.93
VPS52-214ENST00000463486 CYB5R4Q7L1T6 521 aa20.86■□□□□ 0.93
VPS52-214ENST00000463486 DGKHQ86XP1 1220 aa20.86■□□□□ 0.93
VPS52-214ENST00000463486 KRT23Q9C075 422 aa20.86■□□□□ 0.93
VPS52-214ENST00000463486 CNNM2Q9H8M5 875 aa20.86■□□□□ 0.93
VPS52-214ENST00000463486 VWA5AO00534 786 aa20.85■□□□□ 0.93
VPS52-214ENST00000463486 TNPO2O14787 897 aaKnown RBP20.85■□□□□ 0.93
VPS52-214ENST00000463486 RAD21O60216 631 aa20.85■□□□□ 0.93
VPS52-214ENST00000463486 BMP3P12645 472 aa20.85■□□□□ 0.93
VPS52-214ENST00000463486 MCCP23508 829 aa20.85■□□□□ 0.93
VPS52-214ENST00000463486 TMEM132BQ14DG7 1078 aa20.85■□□□□ 0.93
VPS52-214ENST00000463486 MB21D1Q8N884 522 aa20.85■□□□□ 0.93
VPS52-214ENST00000463486 ZSCAN10Q96SZ4 725 aaPredicted RBP20.85■□□□□ 0.93
VPS52-214ENST00000463486 ANO2Q9NQ90 1003 aa20.85■□□□□ 0.93
VPS52-214ENST00000463486 PLXNB2O15031 1838 aa20.84■□□□□ 0.93
VPS52-214ENST00000463486 SLC27A2O14975 620 aa20.84■□□□□ 0.93
VPS52-214ENST00000463486 FLT3LGP49771 235 aa20.84■□□□□ 0.93
VPS52-214ENST00000463486 SEC23AQ15436 765 aa20.84■□□□□ 0.93
VPS52-214ENST00000463486 ENAHQ8N8S7 591 aaPredicted RBP20.84■□□□□ 0.93
VPS52-214ENST00000463486 USP6NLQ92738 828 aa20.84■□□□□ 0.93
VPS52-214ENST00000463486 ARMC5Q96C12 935 aa20.84■□□□□ 0.93
VPS52-214ENST00000463486 SLF1Q9BQI6 1058 aa20.84■□□□□ 0.93
VPS52-214ENST00000463486 MOV10L1Q9BXT6 1211 aaKnown RBP20.84■□□□□ 0.93
VPS52-214ENST00000463486 BRCA2P51587 3418 aa20.84■□□□□ 0.93
VPS52-214ENST00000463486 SNHG28P0DPA3 235 aa20.83■□□□□ 0.93
VPS52-214ENST00000463486 HOXD10P28358 340 aa20.83■□□□□ 0.93
VPS52-214ENST00000463486 MAPK4P31152 587 aa20.83■□□□□ 0.93
VPS52-214ENST00000463486 CREB3L3Q68CJ9 461 aa20.83■□□□□ 0.93
VPS52-214ENST00000463486 PRPF38AQ8NAV1 312 aaKnown RBP20.83■□□□□ 0.93
VPS52-214ENST00000463486 SPATC1LQ9H0A9 340 aa20.83■□□□□ 0.93
VPS52-214ENST00000463486 ZNF214Q9UL59 606 aaPredicted RBP20.83■□□□□ 0.93
VPS52-214ENST00000463486 PLA2G6O60733 806 aa20.82■□□□□ 0.92
VPS52-214ENST00000463486 SLC1A4P43007 532 aa20.82■□□□□ 0.92
VPS52-214ENST00000463486 ANTXR2P58335 489 aa20.82■□□□□ 0.92
VPS52-214ENST00000463486 IRF5Q13568 498 aa20.82■□□□□ 0.92
VPS52-214ENST00000463486 MORN1Q5T089 497 aa20.82■□□□□ 0.92
VPS52-214ENST00000463486 IFFO2Q5TF58 517 aa20.82■□□□□ 0.92
VPS52-214ENST00000463486 CASC1Q6TDU7 716 aa20.82■□□□□ 0.92
VPS52-214ENST00000463486 GPR142Q7Z601 462 aa20.82■□□□□ 0.92
VPS52-214ENST00000463486 IQCA1Q86XH1 822 aa20.82■□□□□ 0.92
VPS52-214ENST00000463486 MB21D2Q8IYB1 491 aaPredicted RBP20.82■□□□□ 0.92
VPS52-214ENST00000463486 COA7Q96BR5 231 aa20.82■□□□□ 0.92
VPS52-214ENST00000463486 CHMP4CQ96CF2 233 aa20.82■□□□□ 0.92
VPS52-214ENST00000463486 FEM1BQ9UK73 627 aa20.82■□□□□ 0.92
VPS52-214ENST00000463486 TNKSO95271 1327 aa20.81■□□□□ 0.92
VPS52-214ENST00000463486 TMEM232C9JQI7 657 aa20.81■□□□□ 0.92
VPS52-214ENST00000463486 CCDC178Q5BJE1 867 aa20.81■□□□□ 0.92
VPS52-214ENST00000463486 KCTD1Q719H9 257 aa20.81■□□□□ 0.92
VPS52-214ENST00000463486 SHCBP1Q8NEM2 672 aa20.81■□□□□ 0.92
VPS52-214ENST00000463486 DCAF4Q8WV16 495 aa20.81■□□□□ 0.92
VPS52-214ENST00000463486 SLC38A10Q9HBR0 1119 aa20.81■□□□□ 0.92
VPS52-214ENST00000463486 COL11A1P12107 1806 aaPredicted RBP20.81■□□□□ 0.92
VPS52-214ENST00000463486 PDHBP11177 359 aa20.8■□□□□ 0.92
VPS52-214ENST00000463486 CCNA1P78396 465 aa20.8■□□□□ 0.92
VPS52-214ENST00000463486 BTNL9Q6UXG8 535 aa20.8■□□□□ 0.92
VPS52-214ENST00000463486 PLEKHH3Q7Z736 793 aa20.8■□□□□ 0.92
VPS52-214ENST00000463486 NCOA7Q8NI08 942 aa20.8■□□□□ 0.92
VPS52-214ENST00000463486 ZNF333Q96JL9 665 aa20.8■□□□□ 0.92
VPS52-214ENST00000463486 ATP2A1O14983 1001 aa20.79■□□□□ 0.92
VPS52-214ENST00000463486 ERCC3P19447 782 aa20.79■□□□□ 0.92
VPS52-214ENST00000463486 TRDNQ13061 729 aa20.79■□□□□ 0.92
VPS52-214ENST00000463486 TSGA10IPQ3SY00 556 aa20.79■□□□□ 0.92
VPS52-214ENST00000463486 TTBK2Q6IQ55 1244 aa20.79■□□□□ 0.92
VPS52-214ENST00000463486 SAMD1Q6SPF0 538 aaPredicted RBP20.79■□□□□ 0.92
VPS52-214ENST00000463486 RASEFQ8IZ41 740 aa20.79■□□□□ 0.92
VPS52-214ENST00000463486 SH3TC2Q8TF17 1288 aa20.79■□□□□ 0.92
VPS52-214ENST00000463486 KCNB2Q92953 911 aa20.79■□□□□ 0.92
VPS52-214ENST00000463486 KIFC2Q96AC6 838 aa20.79■□□□□ 0.92
VPS52-214ENST00000463486 SENP2Q9HC62 589 aa20.79■□□□□ 0.92
VPS52-214ENST00000463486 PTPREP23469 700 aa20.78■□□□□ 0.92
VPS52-214ENST00000463486 STAT3P40763 770 aa20.78■□□□□ 0.92
VPS52-214ENST00000463486 STAT2P52630 851 aa20.78■□□□□ 0.92
VPS52-214ENST00000463486 ZNF543Q08ER8 600 aa20.78■□□□□ 0.92
VPS52-214ENST00000463486 CHST3Q7LGC8 479 aa20.78■□□□□ 0.92
VPS52-214ENST00000463486 FAM160B2Q86V87 743 aa20.78■□□□□ 0.92
VPS52-214ENST00000463486 RIOX2Q8IUF8 465 aa20.78■□□□□ 0.92
VPS52-214ENST00000463486 PNMA1Q8ND90 353 aa20.78■□□□□ 0.92
VPS52-214ENST00000463486 RAET1EQ8TD07 263 aa20.78■□□□□ 0.92
VPS52-214ENST00000463486 IGDCC4Q8TDY8 1250 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms