RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 SDR42E1Q8WUS8 393 aa11.44□□□□□ -0.58
PTPRD-207ENST00000463477 NAP1L5Q96NT1 182 aaPredicted RBP11.44□□□□□ -0.58
PTPRD-207ENST00000463477 USP28Q96RU2 1077 aa11.44□□□□□ -0.58
PTPRD-207ENST00000463477 DNAJC18Q9H819 358 aa11.44□□□□□ -0.58
PTPRD-207ENST00000463477 GINM1Q9NU53 330 aa11.44□□□□□ -0.58
PTPRD-207ENST00000463477 SERPINB13Q9UIV8 391 aa11.44□□□□□ -0.58
PTPRD-207ENST00000463477 TAOK2Q9UL54 1235 aa11.44□□□□□ -0.58
PTPRD-207ENST00000463477 ZHX2Q9Y6X8 837 aa11.44□□□□□ -0.58
PTPRD-207ENST00000463477 IGF2BP3O00425 579 aaKnown RBP eCLIP11.43□□□□□ -0.58
PTPRD-207ENST00000463477 PRKAB2O43741 272 aa11.43□□□□□ -0.58
PTPRD-207ENST00000463477 POLR3DP05423 398 aaPredicted RBP11.43□□□□□ -0.58
PTPRD-207ENST00000463477 LIFRP42702 1097 aa11.43□□□□□ -0.58
PTPRD-207ENST00000463477 RRP1BQ14684 758 aaKnown RBP11.43□□□□□ -0.58
PTPRD-207ENST00000463477 NOM1Q5C9Z4 860 aaKnown RBP11.43□□□□□ -0.58
PTPRD-207ENST00000463477 COL13A1Q5TAT6 717 aaPredicted RBP11.43□□□□□ -0.58
PTPRD-207ENST00000463477 TATDN1Q6P1N9 297 aa11.43□□□□□ -0.58
PTPRD-207ENST00000463477 CHST3Q7LGC8 479 aa11.43□□□□□ -0.58
PTPRD-207ENST00000463477 ENGASEQ8NFI3 743 aa11.43□□□□□ -0.58
PTPRD-207ENST00000463477 BRI3BPQ8WY22 251 aa11.43□□□□□ -0.58
PTPRD-207ENST00000463477 C8orf76Q96K31 380 aa11.43□□□□□ -0.58
PTPRD-207ENST00000463477 CNNM2Q9H8M5 875 aa11.43□□□□□ -0.58
PTPRD-207ENST00000463477 POLR3EQ9NVU0 708 aa11.43□□□□□ -0.58
PTPRD-207ENST00000463477 MCM9Q9NXL9 1143 aa11.43□□□□□ -0.58
PTPRD-207ENST00000463477 TSKSQ9UJT2 592 aa11.43□□□□□ -0.58
PTPRD-207ENST00000463477 AFG3L2Q9Y4W6 797 aa11.43□□□□□ -0.58
PTPRD-207ENST00000463477 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.43□□□□□ -0.58
PTPRD-207ENST00000463477 OTOFQ9HC10 1997 aa11.43□□□□□ -0.58
PTPRD-207ENST00000463477 CCL15-CCL14A0A0B4J2E2 113 aa11.43□□□□□ -0.58
PTPRD-207ENST00000463477 FAM160A1Q05DH4 1040 aa11.43□□□□□ -0.58
PTPRD-207ENST00000463477 GABPAQ06546 454 aa11.43□□□□□ -0.58
PTPRD-207ENST00000463477 CCL15Q16663 113 aa11.43□□□□□ -0.58
PTPRD-207ENST00000463477 ADALQ6DHV7 355 aa11.43□□□□□ -0.58
PTPRD-207ENST00000463477 CPLX2Q6PUV4 134 aaKnown RBP11.43□□□□□ -0.58
PTPRD-207ENST00000463477 SASS6Q6UVJ0 657 aa11.43□□□□□ -0.58
PTPRD-207ENST00000463477 CCDC73Q6ZRK6 1079 aa11.43□□□□□ -0.58
PTPRD-207ENST00000463477 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.43□□□□□ -0.58
PTPRD-207ENST00000463477 TBC1D10CQ8IV04 446 aa11.43□□□□□ -0.58
PTPRD-207ENST00000463477 TRIM34Q9BYJ4 488 aa11.43□□□□□ -0.58
PTPRD-207ENST00000463477 ZCCHC17Q9NP64 241 aaKnown RBP11.43□□□□□ -0.58
PTPRD-207ENST00000463477 ORC3Q9UBD5 711 aaPredicted RBP11.43□□□□□ -0.58
PTPRD-207ENST00000463477 SLC4A4Q9Y6R1 1079 aa11.43□□□□□ -0.58
PTPRD-207ENST00000463477 STK36Q9NRP7 1315 aa11.42□□□□□ -0.58
PTPRD-207ENST00000463477 GOLGA6L6A8MZA4 724 aa11.42□□□□□ -0.58
PTPRD-207ENST00000463477 CPLX1O14810 134 aa11.42□□□□□ -0.58
PTPRD-207ENST00000463477 TBC1D8O95759 1140 aa11.42□□□□□ -0.58
PTPRD-207ENST00000463477 ASNSP08243 561 aa11.42□□□□□ -0.58
PTPRD-207ENST00000463477 RCAN1P53805 252 aa11.42□□□□□ -0.58
PTPRD-207ENST00000463477 SNW1Q13573 536 aaKnown RBP11.42□□□□□ -0.58
PTPRD-207ENST00000463477 CCAR1Q8IX12 1150 aaKnown RBP11.42□□□□□ -0.58
PTPRD-207ENST00000463477 KCNG4Q8TDN1 519 aa11.42□□□□□ -0.58
PTPRD-207ENST00000463477 KRT23Q9C075 422 aa11.42□□□□□ -0.58
PTPRD-207ENST00000463477 GPHNQ9NQX3 736 aaPredicted RBP11.42□□□□□ -0.58
PTPRD-207ENST00000463477 NAP1L2Q9ULW6 460 aaPredicted RBP11.42□□□□□ -0.58
PTPRD-207ENST00000463477 FOCADQ5VW36 1801 aa11.42□□□□□ -0.58
PTPRD-207ENST00000463477 CDK5RAP2Q96SN8 1893 aa11.41□□□□□ -0.58
PTPRD-207ENST00000463477 USP17L5A8MUK1 530 aa11.41□□□□□ -0.58
PTPRD-207ENST00000463477 GSG1L2A8MUP6 293 aa11.41□□□□□ -0.58
PTPRD-207ENST00000463477 USP17L12C9JPN9 530 aa11.41□□□□□ -0.58
PTPRD-207ENST00000463477 USP17L21D6R901 530 aa11.41□□□□□ -0.58
PTPRD-207ENST00000463477 CAMK4Q16566 473 aa11.41□□□□□ -0.58
PTPRD-207ENST00000463477 SLC4A8Q2Y0W8 1093 aa11.41□□□□□ -0.58
PTPRD-207ENST00000463477 ANO6Q4KMQ2 910 aa11.41□□□□□ -0.58
PTPRD-207ENST00000463477 C12orf60Q5U649 245 aa11.41□□□□□ -0.58
PTPRD-207ENST00000463477 APOA5Q6Q788 366 aa11.41□□□□□ -0.58
PTPRD-207ENST00000463477 CYB5R4Q7L1T6 521 aa11.41□□□□□ -0.58
PTPRD-207ENST00000463477 FASTKD5Q7L8L6 764 aaKnown RBP11.41□□□□□ -0.58
PTPRD-207ENST00000463477 IFNL3Q8IZI9 196 aa11.41□□□□□ -0.58
PTPRD-207ENST00000463477 LINC00301Q8NCQ3 95 aa11.41□□□□□ -0.58
PTPRD-207ENST00000463477 IGDCC4Q8TDY8 1250 aa11.41□□□□□ -0.58
PTPRD-207ENST00000463477 STAG1Q8WVM7 1258 aa11.41□□□□□ -0.58
PTPRD-207ENST00000463477 PIBF1Q8WXW3 757 aa11.41□□□□□ -0.58
PTPRD-207ENST00000463477 CBX8Q9HC52 389 aa11.41□□□□□ -0.58
PTPRD-207ENST00000463477 LAMB1P07942 1786 aa11.41□□□□□ -0.58
PTPRD-207ENST00000463477 A0A0G2JLL6 359 aaPredicted RBP11.4□□□□□ -0.58
PTPRD-207ENST00000463477 BTBD19C9JJ37 291 aa11.4□□□□□ -0.58
PTPRD-207ENST00000463477 AP5Z1O43299 807 aa11.4□□□□□ -0.58
PTPRD-207ENST00000463477 KINO60870 393 aaKnown RBP11.4□□□□□ -0.58
PTPRD-207ENST00000463477 METAP2P50579 478 aaKnown RBP eCLIP11.4□□□□□ -0.58
PTPRD-207ENST00000463477 JAG1P78504 1218 aa11.4□□□□□ -0.58
PTPRD-207ENST00000463477 MOGSQ13724 837 aa11.4□□□□□ -0.58
PTPRD-207ENST00000463477 STX1AQ16623 288 aa11.4□□□□□ -0.58
PTPRD-207ENST00000463477 CERKLQ49MI3 558 aaPredicted RBP11.4□□□□□ -0.58
PTPRD-207ENST00000463477 TPRNQ4KMQ1 711 aa11.4□□□□□ -0.58
PTPRD-207ENST00000463477 SBK1Q52WX2 424 aa11.4□□□□□ -0.58
PTPRD-207ENST00000463477 MYSM1Q5VVJ2 828 aa11.4□□□□□ -0.58
PTPRD-207ENST00000463477 CTR9Q6PD62 1173 aa11.4□□□□□ -0.58
PTPRD-207ENST00000463477 PRRT2Q7Z6L0 340 aaPredicted RBP11.4□□□□□ -0.58
PTPRD-207ENST00000463477 ANKRD23Q86SG2 305 aa11.4□□□□□ -0.58
PTPRD-207ENST00000463477 CKAP2LQ8IYA6 745 aa11.4□□□□□ -0.58
PTPRD-207ENST00000463477 ZNF280CQ8ND82 737 aa11.4□□□□□ -0.58
PTPRD-207ENST00000463477 MRPS27Q92552 414 aaKnown RBP11.4□□□□□ -0.58
PTPRD-207ENST00000463477 WDR18Q9BV38 432 aa11.4□□□□□ -0.58
PTPRD-207ENST00000463477 NACAP1Q9BZK3 213 aa11.4□□□□□ -0.58
PTPRD-207ENST00000463477 NAPBQ9H115 298 aa11.4□□□□□ -0.58
PTPRD-207ENST00000463477 R3HDMLQ9H3Y0 253 aa11.4□□□□□ -0.58
PTPRD-207ENST00000463477 LY9Q9HBG7 655 aa11.4□□□□□ -0.58
PTPRD-207ENST00000463477 EPB41L4AQ9HCS5 686 aaPredicted RBP11.4□□□□□ -0.58
PTPRD-207ENST00000463477 GPR25O00155 361 aa11.4□□□□□ -0.59
PTPRD-207ENST00000463477 APPP05067 770 aa11.4□□□□□ -0.59
PTPRD-207ENST00000463477 CDC25BP30305 580 aa11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms