RNA–Protein interactions for RNA: ENST00000463446.1

EPHA4-210, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 579 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-210ENST00000463446 GRM4Q14833 912 aa8.58□□□□□ -1.04
EPHA4-210ENST00000463446 ME3Q16798 604 aa8.58□□□□□ -1.04
EPHA4-210ENST00000463446 LARP1BQ659C4 914 aaKnown RBP8.58□□□□□ -1.04
EPHA4-210ENST00000463446 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.58□□□□□ -1.04
EPHA4-210ENST00000463446 MB21D1Q8N884 522 aa8.58□□□□□ -1.04
EPHA4-210ENST00000463446 BICD2Q8TD16 824 aa8.58□□□□□ -1.04
EPHA4-210ENST00000463446 GTF3C6Q969F1 213 aa8.58□□□□□ -1.04
EPHA4-210ENST00000463446 ZKSCAN4Q969J2 545 aaPredicted RBP8.58□□□□□ -1.04
EPHA4-210ENST00000463446 C12orf42Q96LP6 360 aa8.58□□□□□ -1.04
EPHA4-210ENST00000463446 SPZ1Q9BXG8 430 aa8.58□□□□□ -1.04
EPHA4-210ENST00000463446 MAP3K20Q9NYL2 800 aaKnown RBP8.58□□□□□ -1.04
EPHA4-210ENST00000463446 ZNF646O15015 1829 aaPredicted RBP8.57□□□□□ -1.04
EPHA4-210ENST00000463446 MANSC4A6NHS7 340 aaPredicted RBP8.57□□□□□ -1.04
EPHA4-210ENST00000463446 KIF3CO14782 793 aa8.57□□□□□ -1.04
EPHA4-210ENST00000463446 ALDH1A1P00352 501 aa8.57□□□□□ -1.04
EPHA4-210ENST00000463446 PDHBP11177 359 aa8.57□□□□□ -1.04
EPHA4-210ENST00000463446 CPA1P15085 419 aa8.57□□□□□ -1.04
EPHA4-210ENST00000463446 GNA11P29992 359 aa8.57□□□□□ -1.04
EPHA4-210ENST00000463446 HOXA7P31268 230 aaPredicted RBP8.57□□□□□ -1.04
EPHA4-210ENST00000463446 INPP5BP32019 993 aa8.57□□□□□ -1.04
EPHA4-210ENST00000463446 COPB2P35606 906 aa8.57□□□□□ -1.04
EPHA4-210ENST00000463446 ZNF157P51786 506 aaPredicted RBP8.57□□□□□ -1.04
EPHA4-210ENST00000463446 ZNF543Q08ER8 600 aa8.57□□□□□ -1.04
EPHA4-210ENST00000463446 SREBF2Q12772 1141 aa8.57□□□□□ -1.04
EPHA4-210ENST00000463446 STK3Q13188 491 aa8.57□□□□□ -1.04
EPHA4-210ENST00000463446 VGLL4Q14135 290 aa8.57□□□□□ -1.04
EPHA4-210ENST00000463446 CCDC96Q2M329 555 aa8.57□□□□□ -1.04
EPHA4-210ENST00000463446 PRAMEF18Q5VWM3 479 aa8.57□□□□□ -1.04
EPHA4-210ENST00000463446 RGMBQ6NW40 437 aa8.57□□□□□ -1.04
EPHA4-210ENST00000463446 BTNL9Q6UXG8 535 aa8.57□□□□□ -1.04
EPHA4-210ENST00000463446 MICU3Q86XE3 530 aa8.57□□□□□ -1.04
EPHA4-210ENST00000463446 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.57□□□□□ -1.04
EPHA4-210ENST00000463446 LRRC2Q9BYS8 371 aa8.57□□□□□ -1.04
EPHA4-210ENST00000463446 BRPF3Q9ULD4 1205 aa8.57□□□□□ -1.04
EPHA4-210ENST00000463446 ISY1Q9ULR0 285 aaKnown RBP8.57□□□□□ -1.04
EPHA4-210ENST00000463446 KCNH4Q9UQ05 1017 aa8.57□□□□□ -1.04
EPHA4-210ENST00000463446 NID2Q14112 1375 aa8.57□□□□□ -1.04
EPHA4-210ENST00000463446 NAV1Q8NEY1 1877 aa8.57□□□□□ -1.04
EPHA4-210ENST00000463446 STK36Q9NRP7 1315 aa8.56□□□□□ -1.04
EPHA4-210ENST00000463446 BAZ2AQ9UIF9 1905 aaKnown RBP8.56□□□□□ -1.04
EPHA4-210ENST00000463446 PNMA6FA0A0J9YX94 578 aa8.56□□□□□ -1.04
EPHA4-210ENST00000463446 B4DLN1 442 aa8.56□□□□□ -1.04
EPHA4-210ENST00000463446 UBE2Q2LH0YL09 131 aa8.56□□□□□ -1.04
EPHA4-210ENST00000463446 H3BQV1 296 aa8.56□□□□□ -1.04
EPHA4-210ENST00000463446 NMT2O60551 498 aa8.56□□□□□ -1.04
EPHA4-210ENST00000463446 FMNL1O95466 1100 aaPredicted RBP8.56□□□□□ -1.04
EPHA4-210ENST00000463446 GUCY1A2P33402 732 aa8.56□□□□□ -1.04
EPHA4-210ENST00000463446 MRPL12P52815 198 aaKnown RBP8.56□□□□□ -1.04
EPHA4-210ENST00000463446 OAZ1P54368 228 aa8.56□□□□□ -1.04
EPHA4-210ENST00000463446 HUNKP57058 714 aa8.56□□□□□ -1.04
EPHA4-210ENST00000463446 CCT2P78371 535 aaKnown RBP8.56□□□□□ -1.04
EPHA4-210ENST00000463446 SCRN1Q12765 414 aa8.56□□□□□ -1.04
EPHA4-210ENST00000463446 PRKG1Q13976 671 aa8.56□□□□□ -1.04
EPHA4-210ENST00000463446 ATL3Q6DD88 541 aa8.56□□□□□ -1.04
EPHA4-210ENST00000463446 MCF2L2Q86YR7 1114 aa8.56□□□□□ -1.04
EPHA4-210ENST00000463446 ZNF784Q8NCA9 323 aaPredicted RBP8.56□□□□□ -1.04
EPHA4-210ENST00000463446 CCDC148Q8NFR7 591 aa8.56□□□□□ -1.04
EPHA4-210ENST00000463446 OPTNQ96CV9 577 aa8.56□□□□□ -1.04
EPHA4-210ENST00000463446 TCEANC2Q96MN5 208 aa8.56□□□□□ -1.04
EPHA4-210ENST00000463446 ZSCAN16Q9H4T2 348 aaPredicted RBP8.56□□□□□ -1.04
EPHA4-210ENST00000463446 RIOX1Q9H6W3 641 aa8.56□□□□□ -1.04
EPHA4-210ENST00000463446 CREBZFQ9NS37 354 aa8.56□□□□□ -1.04
EPHA4-210ENST00000463446 ORC3Q9UBD5 711 aaPredicted RBP8.56□□□□□ -1.04
EPHA4-210ENST00000463446 ABT1Q9ULW3 272 aaKnown RBP8.56□□□□□ -1.04
EPHA4-210ENST00000463446 TAF6LQ9Y6J9 622 aa8.56□□□□□ -1.04
EPHA4-210ENST00000463446 TLL2Q9Y6L7 1015 aa8.56□□□□□ -1.04
EPHA4-210ENST00000463446 V9GY48 417 aaPredicted RBP8.56□□□□□ -1.04
EPHA4-210ENST00000463446 PASKQ96RG2 1323 aa8.55□□□□□ -1.04
EPHA4-210ENST00000463446 LAMA4Q16363 1823 aa8.55□□□□□ -1.04
EPHA4-210ENST00000463446 A0A0G2JLL6 359 aaPredicted RBP8.55□□□□□ -1.04
EPHA4-210ENST00000463446 TRIM75PA6NK02 468 aa8.55□□□□□ -1.04
EPHA4-210ENST00000463446 FAM196BA6NMK8 535 aa8.55□□□□□ -1.04
EPHA4-210ENST00000463446 TMEM232C9JQI7 657 aa8.55□□□□□ -1.04
EPHA4-210ENST00000463446 ZBTB5O15062 677 aa8.55□□□□□ -1.04
EPHA4-210ENST00000463446 ADD1P35611 737 aaKnown RBP8.55□□□□□ -1.04
EPHA4-210ENST00000463446 GCLCP48506 637 aaPredicted RBP8.55□□□□□ -1.04
EPHA4-210ENST00000463446 APLP1P51693 650 aa8.55□□□□□ -1.04
EPHA4-210ENST00000463446 CCNA1P78396 465 aa8.55□□□□□ -1.04
EPHA4-210ENST00000463446 IRX3P78415 501 aaPredicted RBP8.55□□□□□ -1.04
EPHA4-210ENST00000463446 NOGQ13253 232 aa8.55□□□□□ -1.04
EPHA4-210ENST00000463446 GNL2Q13823 731 aaKnown RBP8.55□□□□□ -1.04
EPHA4-210ENST00000463446 ARHGEF6Q15052 776 aa8.55□□□□□ -1.04
EPHA4-210ENST00000463446 DEFB115Q30KQ5 88 aa8.55□□□□□ -1.04
EPHA4-210ENST00000463446 TKFCQ3LXA3 575 aa8.55□□□□□ -1.04
EPHA4-210ENST00000463446 CST9Q5W186 159 aa8.55□□□□□ -1.04
EPHA4-210ENST00000463446 CATSPERGQ6ZRH7 1159 aa8.55□□□□□ -1.04
EPHA4-210ENST00000463446 TMTC3Q6ZXV5 915 aa8.55□□□□□ -1.04
EPHA4-210ENST00000463446 NOL8Q76FK4 1167 aaKnown RBP8.55□□□□□ -1.04
EPHA4-210ENST00000463446 PRRT2Q7Z6L0 340 aaPredicted RBP8.55□□□□□ -1.04
EPHA4-210ENST00000463446 SAPCD2Q86UD0 394 aa8.55□□□□□ -1.04
EPHA4-210ENST00000463446 SIAH1Q8IUQ4 282 aa8.55□□□□□ -1.04
EPHA4-210ENST00000463446 CCDC83Q8IWF9 413 aa8.55□□□□□ -1.04
EPHA4-210ENST00000463446 SMARCC2Q8TAQ2 1214 aa8.55□□□□□ -1.04
EPHA4-210ENST00000463446 CUL5Q93034 780 aa8.55□□□□□ -1.04
EPHA4-210ENST00000463446 SLF1Q9BQI6 1058 aa8.55□□□□□ -1.04
EPHA4-210ENST00000463446 AMNQ9BXJ7 453 aa8.55□□□□□ -1.04
EPHA4-210ENST00000463446 ELP3Q9H9T3 547 aa8.55□□□□□ -1.04
EPHA4-210ENST00000463446 C6orf50Q9HD87 102 aa8.55□□□□□ -1.04
EPHA4-210ENST00000463446 CHMP5Q9NZZ3 219 aa8.55□□□□□ -1.04
EPHA4-210ENST00000463446 MAD2L2Q9UI95 211 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms