RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 ORC4O43929 436 aa19.24■□□□□ 0.67
COL1A1-202ENST00000463440 RANBP6O60518 1105 aaKnown RBP19.24■□□□□ 0.67
COL1A1-202ENST00000463440 NDUFB10O96000 172 aa19.24■□□□□ 0.67
COL1A1-202ENST00000463440 GJB1P08034 283 aa19.24■□□□□ 0.67
COL1A1-202ENST00000463440 PLS1Q14651 629 aa19.24■□□□□ 0.67
COL1A1-202ENST00000463440 SHCBP1Q8NEM2 672 aa19.24■□□□□ 0.67
COL1A1-202ENST00000463440 USP6NLQ92738 828 aa19.24■□□□□ 0.67
COL1A1-202ENST00000463440 MOV10L1Q9BXT6 1211 aaKnown RBP19.24■□□□□ 0.67
COL1A1-202ENST00000463440 UNC93B1Q9H1C4 597 aa19.24■□□□□ 0.67
COL1A1-202ENST00000463440 INCENPQ9NQS7 918 aa19.24■□□□□ 0.67
COL1A1-202ENST00000463440 TOMM22Q9NS69 142 aa19.24■□□□□ 0.67
COL1A1-202ENST00000463440 A0A0G2JMZ2 1700 aa19.23■□□□□ 0.67
COL1A1-202ENST00000463440 GSPT1P15170 499 aaKnown RBP19.23■□□□□ 0.67
COL1A1-202ENST00000463440 PTPREP23469 700 aa19.23■□□□□ 0.67
COL1A1-202ENST00000463440 APBA2Q99767 749 aa19.23■□□□□ 0.67
COL1A1-202ENST00000463440 FBXO28Q9NVF7 368 aa19.23■□□□□ 0.67
COL1A1-202ENST00000463440 PPP1R9AQ9ULJ8 1098 aa19.23■□□□□ 0.67
COL1A1-202ENST00000463440 FGRP09769 529 aa19.22■□□□□ 0.67
COL1A1-202ENST00000463440 PCP11498 1178 aaKnown RBP19.22■□□□□ 0.67
COL1A1-202ENST00000463440 ZKSCAN1P17029 563 aaPredicted RBP19.22■□□□□ 0.67
COL1A1-202ENST00000463440 GJA8P48165 433 aa19.22■□□□□ 0.67
COL1A1-202ENST00000463440 MAP2K5Q13163 448 aa19.22■□□□□ 0.67
COL1A1-202ENST00000463440 LRRC47Q8N1G4 583 aaKnown RBP19.22■□□□□ 0.67
COL1A1-202ENST00000463440 GMCL1P1Q8NEA9 526 aa19.22■□□□□ 0.67
COL1A1-202ENST00000463440 TRIB2Q92519 343 aa19.22■□□□□ 0.67
COL1A1-202ENST00000463440 NUP88Q99567 741 aaPredicted RBP19.22■□□□□ 0.67
COL1A1-202ENST00000463440 SLF1Q9BQI6 1058 aa19.22■□□□□ 0.67
COL1A1-202ENST00000463440 ADAMTS5Q9UNA0 930 aa19.22■□□□□ 0.67
COL1A1-202ENST00000463440 PARP14Q460N5 1801 aa19.21■□□□□ 0.67
COL1A1-202ENST00000463440 VWA5AO00534 786 aa19.21■□□□□ 0.67
COL1A1-202ENST00000463440 STRNO43815 780 aa19.21■□□□□ 0.67
COL1A1-202ENST00000463440 ERCC3P19447 782 aa19.21■□□□□ 0.67
COL1A1-202ENST00000463440 HAND2P61296 217 aa19.21■□□□□ 0.67
COL1A1-202ENST00000463440 GRB14Q14449 540 aa19.21■□□□□ 0.67
COL1A1-202ENST00000463440 RRP12Q5JTH9 1297 aaKnown RBP19.21■□□□□ 0.67
COL1A1-202ENST00000463440 MROH8Q9H579 483 aa19.21■□□□□ 0.67
COL1A1-202ENST00000463440 STX8Q9UNK0 236 aa19.21■□□□□ 0.67
COL1A1-202ENST00000463440 TACC3Q9Y6A5 838 aa19.21■□□□□ 0.67
COL1A1-202ENST00000463440 ZNF213O14771 459 aa19.2■□□□□ 0.66
COL1A1-202ENST00000463440 SLC25A27O95847 323 aa19.2■□□□□ 0.66
COL1A1-202ENST00000463440 CAPN2P17655 700 aa19.2■□□□□ 0.66
COL1A1-202ENST00000463440 TMEM132BQ14DG7 1078 aa19.2■□□□□ 0.66
COL1A1-202ENST00000463440 AKNAD1Q5T1N1 836 aa19.2■□□□□ 0.66
COL1A1-202ENST00000463440 SLFN13Q68D06 897 aa19.2■□□□□ 0.66
COL1A1-202ENST00000463440 MFSD6Q6ZSS7 791 aa19.2■□□□□ 0.66
COL1A1-202ENST00000463440 NCAPG2Q86XI2 1143 aa19.2■□□□□ 0.66
COL1A1-202ENST00000463440 PRPF38AQ8NAV1 312 aaKnown RBP19.2■□□□□ 0.66
COL1A1-202ENST00000463440 U2AF1L4Q8WU68 220 aaKnown RBP19.2■□□□□ 0.66
COL1A1-202ENST00000463440 DSCC1Q9BVC3 393 aa19.2■□□□□ 0.66
COL1A1-202ENST00000463440 RNF41Q9H4P4 317 aaPredicted RBP19.2■□□□□ 0.66
COL1A1-202ENST00000463440 HMX1Q9NP08 348 aaPredicted RBP19.2■□□□□ 0.66
COL1A1-202ENST00000463440 FEM1BQ9UK73 627 aa19.2■□□□□ 0.66
COL1A1-202ENST00000463440 RPTORQ8N122 1335 aa19.2■□□□□ 0.66
COL1A1-202ENST00000463440 SGPL1O95470 568 aa19.19■□□□□ 0.66
COL1A1-202ENST00000463440 STAG1Q8WVM7 1258 aa19.19■□□□□ 0.66
COL1A1-202ENST00000463440 RUFY2Q8WXA3 655 aa19.19■□□□□ 0.66
COL1A1-202ENST00000463440 SHISA4Q96DD7 197 aa19.19■□□□□ 0.66
COL1A1-202ENST00000463440 DEFB118Q96PH6 123 aa19.19■□□□□ 0.66
COL1A1-202ENST00000463440 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.19■□□□□ 0.66
COL1A1-202ENST00000463440 PAK6Q9NQU5 681 aaPredicted RBP19.19■□□□□ 0.66
COL1A1-202ENST00000463440 IL17RBQ9NRM6 502 aa19.19■□□□□ 0.66
COL1A1-202ENST00000463440 CTDP1Q9Y5B0 961 aaPredicted RBP19.19■□□□□ 0.66
COL1A1-202ENST00000463440 TNRC18O15417 2968 aaPredicted RBP19.18■□□□□ 0.66
COL1A1-202ENST00000463440 NMT2O60551 498 aa19.18■□□□□ 0.66
COL1A1-202ENST00000463440 HOXC6P09630 235 aa19.18■□□□□ 0.66
COL1A1-202ENST00000463440 BMP3P12645 472 aa19.18■□□□□ 0.66
COL1A1-202ENST00000463440 PRKAR2AP13861 404 aaKnown RBP19.18■□□□□ 0.66
COL1A1-202ENST00000463440 COPB2P35606 906 aa19.18■□□□□ 0.66
COL1A1-202ENST00000463440 STAT3P40763 770 aa19.18■□□□□ 0.66
COL1A1-202ENST00000463440 TRIM32Q13049 653 aa19.18■□□□□ 0.66
COL1A1-202ENST00000463440 CCL14Q16627 93 aa19.18■□□□□ 0.66
COL1A1-202ENST00000463440 DPP9Q86TI2 863 aa19.18■□□□□ 0.66
COL1A1-202ENST00000463440 RIOX2Q8IUF8 465 aa19.18■□□□□ 0.66
COL1A1-202ENST00000463440 ABRAQ8N0Z2 381 aa19.18■□□□□ 0.66
COL1A1-202ENST00000463440 GMCL1Q96IK5 515 aa19.18■□□□□ 0.66
COL1A1-202ENST00000463440 CTNNA3Q9UI47 895 aa19.18■□□□□ 0.66
COL1A1-202ENST00000463440 ISY1Q9ULR0 285 aaKnown RBP19.18■□□□□ 0.66
COL1A1-202ENST00000463440 RAD50Q92878 1312 aa19.18■□□□□ 0.66
COL1A1-202ENST00000463440 PDE4DIPQ5VU43 2346 aa19.18■□□□□ 0.66
COL1A1-202ENST00000463440 COL11A1P12107 1806 aaPredicted RBP19.17■□□□□ 0.66
COL1A1-202ENST00000463440 ZBED4O75132 1171 aa19.17■□□□□ 0.66
COL1A1-202ENST00000463440 TFRCP02786 760 aaKnown RBP19.17■□□□□ 0.66
COL1A1-202ENST00000463440 FCER1AP12319 257 aa19.17■□□□□ 0.66
COL1A1-202ENST00000463440 ADORA2AP29274 412 aa19.17■□□□□ 0.66
COL1A1-202ENST00000463440 SLC1A4P43007 532 aa19.17■□□□□ 0.66
COL1A1-202ENST00000463440 NT5C2P49902 561 aa19.17■□□□□ 0.66
COL1A1-202ENST00000463440 MAP3K21Q5TCX8 1036 aa19.17■□□□□ 0.66
COL1A1-202ENST00000463440 MFSD14CQ5VZR4 134 aa19.17■□□□□ 0.66
COL1A1-202ENST00000463440 CENPQQ7L2Z9 268 aaPredicted RBP19.17■□□□□ 0.66
COL1A1-202ENST00000463440 TBC1D10CQ8IV04 446 aa19.17■□□□□ 0.66
COL1A1-202ENST00000463440 REPS2Q8NFH8 660 aa19.17■□□□□ 0.66
COL1A1-202ENST00000463440 KIFC2Q96AC6 838 aa19.17■□□□□ 0.66
COL1A1-202ENST00000463440 NBPF3Q9H094 633 aa19.17■□□□□ 0.66
COL1A1-202ENST00000463440 TCP11L1Q9NUJ3 509 aa19.17■□□□□ 0.66
COL1A1-202ENST00000463440 SLC5A4Q9NY91 659 aa19.17■□□□□ 0.66
COL1A1-202ENST00000463440 ZNF214Q9UL59 606 aaPredicted RBP19.17■□□□□ 0.66
COL1A1-202ENST00000463440 MCCP23508 829 aa19.16■□□□□ 0.66
COL1A1-202ENST00000463440 NOVP48745 357 aa19.16■□□□□ 0.66
COL1A1-202ENST00000463440 IMMTQ16891 758 aaKnown RBP19.16■□□□□ 0.66
COL1A1-202ENST00000463440 CHURC1Q8WUH1 139 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms