RNA–Protein interactions for RNA: ENST00000463097.1

COPS3-205, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-205ENST00000463097 NEFMP07197 916 aa7.67□□□□□ -1.18
COPS3-205ENST00000463097 MTMR1Q13613 665 aa7.67□□□□□ -1.18
COPS3-205ENST00000463097 TTLL4Q14679 1199 aa7.67□□□□□ -1.18
COPS3-205ENST00000463097 LRRC41Q15345 812 aa7.67□□□□□ -1.18
COPS3-205ENST00000463097 NBPF12Q5TAG4 269 aaPredicted RBP7.67□□□□□ -1.18
COPS3-205ENST00000463097 CCSAPQ6IQ19 270 aaPredicted RBP7.67□□□□□ -1.18
COPS3-205ENST00000463097 PKN3Q6P5Z2 889 aa7.67□□□□□ -1.18
COPS3-205ENST00000463097 POMZP3Q6PJE2 187 aa7.67□□□□□ -1.18
COPS3-205ENST00000463097 LHFPL2Q6ZUX7 228 aa7.67□□□□□ -1.18
COPS3-205ENST00000463097 FGD2Q7Z6J4 655 aa7.67□□□□□ -1.18
COPS3-205ENST00000463097 UBE3DQ7Z6J8 389 aa7.67□□□□□ -1.18
COPS3-205ENST00000463097 TRIM59Q8IWR1 403 aa7.67□□□□□ -1.18
COPS3-205ENST00000463097 C7orf61Q8IZ16 206 aa7.67□□□□□ -1.18
COPS3-205ENST00000463097 CRACR2BQ8N4Y2 399 aaPredicted RBP7.67□□□□□ -1.18
COPS3-205ENST00000463097 GPR161Q8N6U8 529 aaKnown RBP7.67□□□□□ -1.18
COPS3-205ENST00000463097 UBASH3BQ8TF42 649 aa7.67□□□□□ -1.18
COPS3-205ENST00000463097 TMPRSS13Q9BYE2 586 aa7.67□□□□□ -1.18
COPS3-205ENST00000463097 MTFR1LQ9H019 292 aa7.67□□□□□ -1.18
COPS3-205ENST00000463097 PRDM6Q9NQX0 595 aa7.67□□□□□ -1.18
COPS3-205ENST00000463097 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.66□□□□□ -1.18
COPS3-205ENST00000463097 C11orf95C9JLR9 678 aaPredicted RBP7.66□□□□□ -1.18
COPS3-205ENST00000463097 SHOXO15266 292 aa7.66□□□□□ -1.18
COPS3-205ENST00000463097 BRINP1O60477 761 aa7.66□□□□□ -1.18
COPS3-205ENST00000463097 DEAF1O75398 565 aaPredicted RBP7.66□□□□□ -1.18
COPS3-205ENST00000463097 GNALP38405 381 aa7.66□□□□□ -1.18
COPS3-205ENST00000463097 RAB27AP51159 221 aa7.66□□□□□ -1.18
COPS3-205ENST00000463097 NEK2P51955 445 aa7.66□□□□□ -1.18
COPS3-205ENST00000463097 RHBDL3P58872 404 aa7.66□□□□□ -1.18
COPS3-205ENST00000463097 ITKQ08881 620 aa7.66□□□□□ -1.18
COPS3-205ENST00000463097 AUHQ13825 339 aaKnown RBP7.66□□□□□ -1.18
COPS3-205ENST00000463097 ZNF460Q14592 562 aa7.66□□□□□ -1.18
COPS3-205ENST00000463097 STAT4Q14765 748 aa7.66□□□□□ -1.18
COPS3-205ENST00000463097 DUOXA2Q1HG44 320 aa7.66□□□□□ -1.18
COPS3-205ENST00000463097 ARHGEF39Q8N4T4 335 aa7.66□□□□□ -1.18
COPS3-205ENST00000463097 DCAF11Q8TEB1 546 aa7.66□□□□□ -1.18
COPS3-205ENST00000463097 PPP1R13LQ8WUF5 828 aa7.66□□□□□ -1.18
COPS3-205ENST00000463097 BTN2A2Q8WVV5 523 aa7.66□□□□□ -1.18
COPS3-205ENST00000463097 PTPRN2Q92932 1015 aa7.66□□□□□ -1.18
COPS3-205ENST00000463097 GP6Q9HCN6 339 aa7.66□□□□□ -1.18
COPS3-205ENST00000463097 AP4E1Q9UPM8 1137 aa7.66□□□□□ -1.18
COPS3-205ENST00000463097 A0A087WZG4 1122 aa7.65□□□□□ -1.18
COPS3-205ENST00000463097 BLACEA4D250 179 aa7.65□□□□□ -1.18
COPS3-205ENST00000463097 MEGF11A6BM72 1044 aa7.65□□□□□ -1.18
COPS3-205ENST00000463097 KPNA6O60684 536 aa7.65□□□□□ -1.18
COPS3-205ENST00000463097 SCGB1D2O95969 90 aa7.65□□□□□ -1.18
COPS3-205ENST00000463097 ITGA4P13612 1032 aa7.65□□□□□ -1.18
COPS3-205ENST00000463097 IGFALSP35858 605 aa7.65□□□□□ -1.18
COPS3-205ENST00000463097 FLT3P36888 993 aa7.65□□□□□ -1.18
COPS3-205ENST00000463097 SEPT7Q16181 437 aaKnown RBP7.65□□□□□ -1.18
COPS3-205ENST00000463097 C1orf229Q6ZS94 237 aaPredicted RBP7.65□□□□□ -1.18
COPS3-205ENST00000463097 CHSY3Q70JA7 882 aa7.65□□□□□ -1.18
COPS3-205ENST00000463097 ADCY4Q8NFM4 1077 aa7.65□□□□□ -1.18
COPS3-205ENST00000463097 XAGE3Q8WTP9 111 aa7.65□□□□□ -1.18
COPS3-205ENST00000463097 ISL2Q96A47 359 aa7.65□□□□□ -1.18
COPS3-205ENST00000463097 SCLYQ96I15 445 aa7.65□□□□□ -1.18
COPS3-205ENST00000463097 FOXQ1Q9C009 403 aa7.65□□□□□ -1.18
COPS3-205ENST00000463097 PUS7LQ9H0K6 701 aaKnown RBP7.65□□□□□ -1.18
COPS3-205ENST00000463097 LRRC4BQ9NT99 713 aa7.65□□□□□ -1.18
COPS3-205ENST00000463097 AKAP10O43572 662 aa7.64□□□□□ -1.19
COPS3-205ENST00000463097 RNGTTO60942 597 aaKnown RBP7.64□□□□□ -1.19
COPS3-205ENST00000463097 CAND2O75155 1236 aa7.64□□□□□ -1.19
COPS3-205ENST00000463097 JMJD7P0C870 316 aa7.64□□□□□ -1.19
COPS3-205ENST00000463097 ADH5P11766 374 aa7.64□□□□□ -1.19
COPS3-205ENST00000463097 RNF4P78317 190 aa7.64□□□□□ -1.19
COPS3-205ENST00000463097 MAP4K2Q12851 820 aa7.64□□□□□ -1.19
COPS3-205ENST00000463097 SF1Q15637 639 aaKnown RBP7.64□□□□□ -1.19
COPS3-205ENST00000463097 CFAP100Q494V2 611 aa7.64□□□□□ -1.19
COPS3-205ENST00000463097 MAP9Q49MG5 647 aa7.64□□□□□ -1.19
COPS3-205ENST00000463097 NUTM2GQ5VZR2 741 aa7.64□□□□□ -1.19
COPS3-205ENST00000463097 UBE2R2Q712K3 238 aaPredicted RBP7.64□□□□□ -1.19
COPS3-205ENST00000463097 CHPFQ8IZ52 775 aa7.64□□□□□ -1.19
COPS3-205ENST00000463097 EDARADDQ8WWZ3 215 aa7.64□□□□□ -1.19
COPS3-205ENST00000463097 KCTD13Q8WZ19 329 aa7.64□□□□□ -1.19
COPS3-205ENST00000463097 VWCEQ96DN2 955 aa7.64□□□□□ -1.19
COPS3-205ENST00000463097 MTMR8Q96EF0 704 aa7.64□□□□□ -1.19
COPS3-205ENST00000463097 MAGEB10Q96LZ2 347 aaPredicted RBP7.64□□□□□ -1.19
COPS3-205ENST00000463097 CCDC140Q96MF4 163 aa7.64□□□□□ -1.19
COPS3-205ENST00000463097 TTC1Q99614 292 aa7.64□□□□□ -1.19
COPS3-205ENST00000463097 SMAD5Q99717 465 aaKnown RBP7.64□□□□□ -1.19
COPS3-205ENST00000463097 CCDC8Q9H0W5 538 aaPredicted RBP7.64□□□□□ -1.19
COPS3-205ENST00000463097 SSU72Q9NP77 194 aaKnown RBP7.64□□□□□ -1.19
COPS3-205ENST00000463097 ZIM2Q9NZV7 527 aa7.64□□□□□ -1.19
COPS3-205ENST00000463097 CGGBP1Q9UFW8 167 aaPredicted RBP7.64□□□□□ -1.19
COPS3-205ENST00000463097 CEP131Q9UPN4 1083 aa7.64□□□□□ -1.19
COPS3-205ENST00000463097 TCRBV16S1A1N1A0A5B0 115 aa7.63□□□□□ -1.19
COPS3-205ENST00000463097 LRIG2O94898 1065 aa7.63□□□□□ -1.19
COPS3-205ENST00000463097 KCNH1O95259 989 aa7.63□□□□□ -1.19
COPS3-205ENST00000463097 NID1P14543 1247 aa7.63□□□□□ -1.19
COPS3-205ENST00000463097 GFRA1P56159 465 aa7.63□□□□□ -1.19
COPS3-205ENST00000463097 BIRC2Q13490 618 aa7.63□□□□□ -1.19
COPS3-205ENST00000463097 NTRK3Q16288 839 aa7.63□□□□□ -1.19
COPS3-205ENST00000463097 CDCA2Q69YH5 1023 aaPredicted RBP7.63□□□□□ -1.19
COPS3-205ENST00000463097 GTF2IRD2BQ6EKJ0 949 aa7.63□□□□□ -1.19
COPS3-205ENST00000463097 MAMDC2Q7Z304 686 aaPredicted RBP7.63□□□□□ -1.19
COPS3-205ENST00000463097 GTF2IRD2Q86UP8 949 aa7.63□□□□□ -1.19
COPS3-205ENST00000463097 SPATS2Q86XZ4 545 aaKnown RBP7.63□□□□□ -1.19
COPS3-205ENST00000463097 SMC5Q8IY18 1101 aa7.63□□□□□ -1.19
COPS3-205ENST00000463097 MYO1HQ8N1T3 1032 aa7.63□□□□□ -1.19
COPS3-205ENST00000463097 DTWD1Q8N5C7 304 aa7.63□□□□□ -1.19
COPS3-205ENST00000463097 MFSD2AQ8NA29 543 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms