RNA–Protein interactions for RNA: ENST00000463004.5

RBM39-223, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 4,580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-223ENST00000463004 DIXDC1Q155Q3 683 aa13.2□□□□□ -0.3
RBM39-223ENST00000463004 VWA3BQ502W6 1294 aa13.2□□□□□ -0.3
RBM39-223ENST00000463004 FAM173BQ6P4H8 233 aa13.2□□□□□ -0.3
RBM39-223ENST00000463004 TDRD7Q8NHU6 1098 aaKnown RBP13.2□□□□□ -0.3
RBM39-223ENST00000463004 KCNB2Q92953 911 aa13.2□□□□□ -0.3
RBM39-223ENST00000463004 UBN2Q6ZU65 1347 aa13.2□□□□□ -0.3
RBM39-223ENST00000463004 ARHGEF35A5YM69 484 aa13.2□□□□□ -0.3
RBM39-223ENST00000463004 H0YCG3 227 aa13.2□□□□□ -0.3
RBM39-223ENST00000463004 PLSCR1O15162 318 aa13.2□□□□□ -0.3
RBM39-223ENST00000463004 GNA14O95837 355 aa13.2□□□□□ -0.3
RBM39-223ENST00000463004 PFKFB1P16118 471 aa13.2□□□□□ -0.3
RBM39-223ENST00000463004 PAK1Q13153 545 aa13.2□□□□□ -0.3
RBM39-223ENST00000463004 SALL3Q9BXA9 1300 aa13.19□□□□□ -0.3
RBM39-223ENST00000463004 GTPBP6O43824 516 aaPredicted RBP13.19□□□□□ -0.3
RBM39-223ENST00000463004 PRPHP41219 470 aa13.19□□□□□ -0.3
RBM39-223ENST00000463004 ISM2Q6H9L7 571 aa13.19□□□□□ -0.3
RBM39-223ENST00000463004 NEDD1Q8NHV4 660 aa13.19□□□□□ -0.3
RBM39-223ENST00000463004 MAP3K14Q99558 947 aa13.19□□□□□ -0.3
RBM39-223ENST00000463004 EIF3JO75822 258 aaKnown RBP13.19□□□□□ -0.3
RBM39-223ENST00000463004 RESTQ13127 1097 aa13.19□□□□□ -0.3
RBM39-223ENST00000463004 LRRC47Q8N1G4 583 aaKnown RBP13.19□□□□□ -0.3
RBM39-223ENST00000463004 PCDHA1Q9Y5I3 950 aa13.19□□□□□ -0.3
RBM39-223ENST00000463004 EXOSC10Q01780 885 aaKnown RBP13.19□□□□□ -0.3
RBM39-223ENST00000463004 SLC17A8Q8NDX2 589 aa13.19□□□□□ -0.3
RBM39-223ENST00000463004 COL14A1Q05707 1796 aaKnown RBP13.19□□□□□ -0.3
RBM39-223ENST00000463004 CETN3O15182 167 aa13.18□□□□□ -0.3
RBM39-223ENST00000463004 AKR1B10O60218 316 aa13.18□□□□□ -0.3
RBM39-223ENST00000463004 PPP4CP60510 307 aa13.18□□□□□ -0.3
RBM39-223ENST00000463004 SLC15A2Q16348 729 aa13.18□□□□□ -0.3
RBM39-223ENST00000463004 KIF4BQ2VIQ3 1234 aa13.18□□□□□ -0.3
RBM39-223ENST00000463004 SH3RF3Q8TEJ3 882 aaPredicted RBP13.18□□□□□ -0.3
RBM39-223ENST00000463004 SRRTQ9BXP5 876 aaKnown RBP13.18□□□□□ -0.3
RBM39-223ENST00000463004 IMPG2Q9BZV3 1241 aa13.18□□□□□ -0.3
RBM39-223ENST00000463004 PCDHA7Q9UN72 937 aa13.18□□□□□ -0.3
RBM39-223ENST00000463004 PNMA6FA0A0J9YX94 578 aa13.18□□□□□ -0.3
RBM39-223ENST00000463004 BACH1O14867 736 aa13.18□□□□□ -0.3
RBM39-223ENST00000463004 ENTPD3O75355 529 aa13.18□□□□□ -0.3
RBM39-223ENST00000463004 CFBP00751 764 aa13.18□□□□□ -0.3
RBM39-223ENST00000463004 SKILP12757 684 aa13.18□□□□□ -0.3
RBM39-223ENST00000463004 TNNT1P13805 278 aa13.18□□□□□ -0.3
RBM39-223ENST00000463004 AP3B2Q13367 1082 aa13.18□□□□□ -0.3
RBM39-223ENST00000463004 SNW1Q13573 536 aaKnown RBP13.18□□□□□ -0.3
RBM39-223ENST00000463004 CCDC186Q7Z3E2 898 aa13.18□□□□□ -0.3
RBM39-223ENST00000463004 TBC1D10CQ8IV04 446 aa13.18□□□□□ -0.3
RBM39-223ENST00000463004 IFT74Q96LB3 600 aa13.18□□□□□ -0.3
RBM39-223ENST00000463004 TMEM232C9JQI7 657 aa13.18□□□□□ -0.3
RBM39-223ENST00000463004 CD2BP2O95400 341 aaKnown RBP13.18□□□□□ -0.3
RBM39-223ENST00000463004 EPB41P11171 864 aaKnown RBP13.18□□□□□ -0.3
RBM39-223ENST00000463004 KRBA2Q6ZNG9 492 aa13.18□□□□□ -0.3
RBM39-223ENST00000463004 NEK11Q8NG66 645 aa13.18□□□□□ -0.3
RBM39-223ENST00000463004 GOLGA5Q8TBA6 731 aa13.18□□□□□ -0.3
RBM39-223ENST00000463004 GINM1Q9NU53 330 aa13.18□□□□□ -0.3
RBM39-223ENST00000463004 PCDHA12Q9UN75 941 aa13.18□□□□□ -0.3
RBM39-223ENST00000463004 C21orf2O43822 256 aa13.18□□□□□ -0.3
RBM39-223ENST00000463004 FGFR2P21802 821 aa13.18□□□□□ -0.3
RBM39-223ENST00000463004 ABCD1P33897 745 aa13.18□□□□□ -0.3
RBM39-223ENST00000463004 MAP9Q49MG5 647 aa13.18□□□□□ -0.3
RBM39-223ENST00000463004 PAXIP1Q6ZW49 1069 aaPredicted RBP13.18□□□□□ -0.3
RBM39-223ENST00000463004 OTUD6AQ7L8S5 288 aa13.18□□□□□ -0.3
RBM39-223ENST00000463004 APOBEC3FQ8IUX4 373 aaKnown RBP13.18□□□□□ -0.3
RBM39-223ENST00000463004 CDHR1Q96JP9 859 aa13.18□□□□□ -0.3
RBM39-223ENST00000463004 GSDMAQ96QA5 445 aa13.18□□□□□ -0.3
RBM39-223ENST00000463004 ANAPC4Q9UJX5 808 aa13.18□□□□□ -0.3
RBM39-223ENST00000463004 SYNRGQ9UMZ2 1314 aa13.18□□□□□ -0.3
RBM39-223ENST00000463004 SCARF1Q14162 830 aa13.17□□□□□ -0.3
RBM39-223ENST00000463004 SEPT2Q15019 361 aa13.17□□□□□ -0.3
RBM39-223ENST00000463004 GPR162Q16538 588 aa13.17□□□□□ -0.3
RBM39-223ENST00000463004 C12orf60Q5U649 245 aa13.17□□□□□ -0.3
RBM39-223ENST00000463004 CTR9Q6PD62 1173 aa13.17□□□□□ -0.3
RBM39-223ENST00000463004 LINC00301Q8NCQ3 95 aa13.17□□□□□ -0.3
RBM39-223ENST00000463004 KIFC2Q96AC6 838 aa13.17□□□□□ -0.3
RBM39-223ENST00000463004 PLVAPQ9BX97 442 aa13.17□□□□□ -0.3
RBM39-223ENST00000463004 NUCKS1Q9H1E3 243 aaKnown RBP13.17□□□□□ -0.3
RBM39-223ENST00000463004 STK17AQ9UEE5 414 aa13.17□□□□□ -0.3
RBM39-223ENST00000463004 FRMD4BQ9Y2L6 1034 aa13.17□□□□□ -0.3
RBM39-223ENST00000463004 GRM4Q14833 912 aa13.17□□□□□ -0.3
RBM39-223ENST00000463004 NAA15Q9BXJ9 866 aaKnown RBP13.17□□□□□ -0.3
RBM39-223ENST00000463004 LUC7L2Q9Y383 392 aaKnown RBP13.17□□□□□ -0.3
RBM39-223ENST00000463004 LMO7Q8WWI1 1683 aa13.17□□□□□ -0.3
RBM39-223ENST00000463004 GADD45BO75293 160 aaPredicted RBP13.17□□□□□ -0.3
RBM39-223ENST00000463004 CCDC175P0C221 793 aa13.17□□□□□ -0.3
RBM39-223ENST00000463004 GYS1P13807 737 aa13.17□□□□□ -0.3
RBM39-223ENST00000463004 CCDC84Q86UT8 332 aaPredicted RBP13.17□□□□□ -0.3
RBM39-223ENST00000463004 CPLX3Q8WVH0 158 aa13.17□□□□□ -0.3
RBM39-223ENST00000463004 WDR11Q9BZH6 1224 aa13.17□□□□□ -0.3
RBM39-223ENST00000463004 VPS33BQ9H267 617 aa13.17□□□□□ -0.3
RBM39-223ENST00000463004 TTC12Q9H892 705 aaPredicted RBP13.17□□□□□ -0.3
RBM39-223ENST00000463004 LY9Q9HBG7 655 aa13.17□□□□□ -0.3
RBM39-223ENST00000463004 GAS7O60861 476 aa13.17□□□□□ -0.3
RBM39-223ENST00000463004 KIF4AO95239 1232 aa13.17□□□□□ -0.3
RBM39-223ENST00000463004 SYDE2Q5VT97 1194 aa13.17□□□□□ -0.3
RBM39-223ENST00000463004 CDAN1Q8IWY9 1227 aa13.17□□□□□ -0.3
RBM39-223ENST00000463004 ZNF579Q8NAF0 562 aaKnown RBP13.17□□□□□ -0.3
RBM39-223ENST00000463004 LMBR1Q8WVP7 490 aa13.17□□□□□ -0.3
RBM39-223ENST00000463004 IFNKQ9P0W0 207 aa13.17□□□□□ -0.3
RBM39-223ENST00000463004 SMARCA1P28370 1054 aa13.16□□□□□ -0.3
RBM39-223ENST00000463004 TMEM63CQ9P1W3 806 aa13.16□□□□□ -0.3
RBM39-223ENST00000463004 BIN2Q9UBW5 565 aaPredicted RBP13.16□□□□□ -0.3
RBM39-223ENST00000463004 ZNRF3Q9ULT6 936 aa13.16□□□□□ -0.3
RBM39-223ENST00000463004 PARP4Q9UKK3 1724 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms