RNA–Protein interactions for RNA: ENST00000462700.5

COL9A3-203, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 1,237 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-203ENST00000462700 RLFQ13129 1914 aa22.29■■□□□ 1.16
COL9A3-203ENST00000462700 ADCY3O60266 1144 aa22.28■■□□□ 1.16
COL9A3-203ENST00000462700 CENPBP07199 599 aaPredicted RBP22.28■■□□□ 1.16
COL9A3-203ENST00000462700 NOVP48745 357 aa22.28■■□□□ 1.16
COL9A3-203ENST00000462700 SAMD1Q6SPF0 538 aaPredicted RBP22.28■■□□□ 1.16
COL9A3-203ENST00000462700 PLEKHH3Q7Z736 793 aa22.28■■□□□ 1.16
COL9A3-203ENST00000462700 SOCS4Q8WXH5 440 aa22.28■■□□□ 1.16
COL9A3-203ENST00000462700 CTNNA3Q9UI47 895 aa22.28■■□□□ 1.16
COL9A3-203ENST00000462700 PPP1R9AQ9ULJ8 1098 aa22.28■■□□□ 1.16
COL9A3-203ENST00000462700 NEDD4P46934 1319 aa22.28■■□□□ 1.16
COL9A3-203ENST00000462700 SGSM2O43147 1006 aa22.27■■□□□ 1.16
COL9A3-203ENST00000462700 ELNP15502 786 aa22.27■■□□□ 1.16
COL9A3-203ENST00000462700 IMMTQ16891 758 aaKnown RBP22.27■■□□□ 1.16
COL9A3-203ENST00000462700 SPATC1LQ9H0A9 340 aa22.27■■□□□ 1.16
COL9A3-203ENST00000462700 CWC22Q9HCG8 908 aaKnown RBP22.27■■□□□ 1.16
COL9A3-203ENST00000462700 ADAMTS5Q9UNA0 930 aa22.27■■□□□ 1.16
COL9A3-203ENST00000462700 LAMA4Q16363 1823 aa22.27■■□□□ 1.15
COL9A3-203ENST00000462700 MYCP01106 439 aaPredicted RBP22.26■■□□□ 1.15
COL9A3-203ENST00000462700 SLFN13Q68D06 897 aa22.26■■□□□ 1.15
COL9A3-203ENST00000462700 NKX2-3Q8TAU0 364 aa22.26■■□□□ 1.15
COL9A3-203ENST00000462700 NUDT12Q9BQG2 462 aa22.26■■□□□ 1.15
COL9A3-203ENST00000462700 MOV10L1Q9BXT6 1211 aaKnown RBP22.26■■□□□ 1.15
COL9A3-203ENST00000462700 TCP11L1Q9NUJ3 509 aa22.26■■□□□ 1.15
COL9A3-203ENST00000462700 BIN2Q9UBW5 565 aaPredicted RBP22.26■■□□□ 1.15
COL9A3-203ENST00000462700 MYH4Q9Y623 1939 aa22.25■■□□□ 1.15
COL9A3-203ENST00000462700 PARP14Q460N5 1801 aa22.25■■□□□ 1.15
COL9A3-203ENST00000462700 POTEFA5A3E0 1075 aa22.25■■□□□ 1.15
COL9A3-203ENST00000462700 UBXN2AP68543 259 aa22.25■■□□□ 1.15
COL9A3-203ENST00000462700 TMEM132BQ14DG7 1078 aa22.25■■□□□ 1.15
COL9A3-203ENST00000462700 BMP2KLQ5H9B9 411 aa22.25■■□□□ 1.15
COL9A3-203ENST00000462700 MORN1Q5T089 497 aa22.25■■□□□ 1.15
COL9A3-203ENST00000462700 WDR78Q5VTH9 848 aa22.25■■□□□ 1.15
COL9A3-203ENST00000462700 ESR2Q92731 530 aa22.25■■□□□ 1.15
COL9A3-203ENST00000462700 USP6NLQ92738 828 aa22.25■■□□□ 1.15
COL9A3-203ENST00000462700 SLF1Q9BQI6 1058 aa22.25■■□□□ 1.15
COL9A3-203ENST00000462700 TMEM106CQ9BVX2 250 aa22.25■■□□□ 1.15
COL9A3-203ENST00000462700 PLXNB2O15031 1838 aa22.24■■□□□ 1.15
COL9A3-203ENST00000462700 VWA5AO00534 786 aa22.24■■□□□ 1.15
COL9A3-203ENST00000462700 BMP3P12645 472 aa22.24■■□□□ 1.15
COL9A3-203ENST00000462700 CYP2B6P20813 491 aa22.24■■□□□ 1.15
COL9A3-203ENST00000462700 NT5C2P49902 561 aa22.24■■□□□ 1.15
COL9A3-203ENST00000462700 PTH1RQ03431 593 aa22.24■■□□□ 1.15
COL9A3-203ENST00000462700 MTFR1Q15390 333 aa22.24■■□□□ 1.15
COL9A3-203ENST00000462700 SHCBP1Q8NEM2 672 aa22.24■■□□□ 1.15
COL9A3-203ENST00000462700 GMCL1Q96IK5 515 aa22.24■■□□□ 1.15
COL9A3-203ENST00000462700 INHAP05111 366 aa22.23■■□□□ 1.15
COL9A3-203ENST00000462700 PTPREP23469 700 aa22.23■■□□□ 1.15
COL9A3-203ENST00000462700 PLS1Q14651 629 aa22.23■■□□□ 1.15
COL9A3-203ENST00000462700 PRPF38AQ8NAV1 312 aaKnown RBP22.23■■□□□ 1.15
COL9A3-203ENST00000462700 REPS2Q8NFH8 660 aa22.23■■□□□ 1.15
COL9A3-203ENST00000462700 FEM1BQ9UK73 627 aa22.23■■□□□ 1.15
COL9A3-203ENST00000462700 IVNS1ABPQ9Y6Y0 642 aa22.23■■□□□ 1.15
COL9A3-203ENST00000462700 SLC15A5A6NIM6 579 aa22.22■■□□□ 1.15
COL9A3-203ENST00000462700 XRCC5P13010 732 aaKnown RBP22.22■■□□□ 1.15
COL9A3-203ENST00000462700 ERCC3P19447 782 aa22.22■■□□□ 1.15
COL9A3-203ENST00000462700 RGS2P41220 211 aa22.22■■□□□ 1.15
COL9A3-203ENST00000462700 GRB14Q14449 540 aa22.22■■□□□ 1.15
COL9A3-203ENST00000462700 ZNF214Q9UL59 606 aaPredicted RBP22.22■■□□□ 1.15
COL9A3-203ENST00000462700 RBBP6Q7Z6E9 1792 aaKnown RBP22.22■■□□□ 1.15
COL9A3-203ENST00000462700 HMGCRP04035 888 aa22.21■■□□□ 1.15
COL9A3-203ENST00000462700 TOP1P11387 765 aaKnown RBP22.21■■□□□ 1.15
COL9A3-203ENST00000462700 CCL5P13501 91 aa22.21■■□□□ 1.15
COL9A3-203ENST00000462700 MCCP23508 829 aa22.21■■□□□ 1.15
COL9A3-203ENST00000462700 SLC1A4P43007 532 aa22.21■■□□□ 1.15
COL9A3-203ENST00000462700 MLLT1Q03111 559 aaPredicted RBP22.21■■□□□ 1.15
COL9A3-203ENST00000462700 MAP2K5Q13163 448 aa22.21■■□□□ 1.15
COL9A3-203ENST00000462700 TRIB2Q92519 343 aa22.21■■□□□ 1.15
COL9A3-203ENST00000462700 KIFC2Q96AC6 838 aa22.21■■□□□ 1.15
COL9A3-203ENST00000462700 APBA2Q99767 749 aa22.21■■□□□ 1.15
COL9A3-203ENST00000462700 TMEM47Q9BQJ4 181 aa22.21■■□□□ 1.15
COL9A3-203ENST00000462700 MROH8Q9H579 483 aa22.21■■□□□ 1.15
COL9A3-203ENST00000462700 U3KPZ7 1027 aaPredicted RBP22.21■■□□□ 1.15
COL9A3-203ENST00000462700 BRCA2P51587 3418 aa22.21■■□□□ 1.15
COL9A3-203ENST00000462700 B4E1Z4 1266 aa22.2■■□□□ 1.14
COL9A3-203ENST00000462700 KDM4AO75164 1064 aa22.2■■□□□ 1.14
COL9A3-203ENST00000462700 SLC25A27O95847 323 aa22.2■■□□□ 1.14
COL9A3-203ENST00000462700 RCSD1Q6JBY9 416 aa22.2■■□□□ 1.14
COL9A3-203ENST00000462700 RASGRP2Q7LDG7 609 aa22.2■■□□□ 1.14
COL9A3-203ENST00000462700 NCAPG2Q86XI2 1143 aa22.2■■□□□ 1.14
COL9A3-203ENST00000462700 RIOX2Q8IUF8 465 aa22.2■■□□□ 1.14
COL9A3-203ENST00000462700 CHMP4CQ96CF2 233 aa22.2■■□□□ 1.14
COL9A3-203ENST00000462700 TTC14Q96N46 770 aa22.2■■□□□ 1.14
COL9A3-203ENST00000462700 CNNM2Q9H8M5 875 aa22.2■■□□□ 1.14
COL9A3-203ENST00000462700 ISY1Q9ULR0 285 aaKnown RBP22.2■■□□□ 1.14
COL9A3-203ENST00000462700 TMEM232C9JQI7 657 aa22.19■■□□□ 1.14
COL9A3-203ENST00000462700 CYP21A2P08686 494 aa22.19■■□□□ 1.14
COL9A3-203ENST00000462700 EN2P19622 333 aaPredicted RBP22.19■■□□□ 1.14
COL9A3-203ENST00000462700 STAT3P40763 770 aa22.19■■□□□ 1.14
COL9A3-203ENST00000462700 STAT2P52630 851 aa22.19■■□□□ 1.14
COL9A3-203ENST00000462700 TRMT44Q8IYL2 757 aaKnown RBP22.19■■□□□ 1.14
COL9A3-203ENST00000462700 DCAF4Q8WV16 495 aa22.19■■□□□ 1.14
COL9A3-203ENST00000462700 MAP4K1Q92918 833 aa22.19■■□□□ 1.14
COL9A3-203ENST00000462700 ZKSCAN3Q9BRR0 538 aa22.19■■□□□ 1.14
COL9A3-203ENST00000462700 ESYT1Q9BSJ8 1104 aa22.19■■□□□ 1.14
COL9A3-203ENST00000462700 KRT23Q9C075 422 aa22.19■■□□□ 1.14
COL9A3-203ENST00000462700 RNF208Q9H0X6 261 aa22.19■■□□□ 1.14
COL9A3-203ENST00000462700 UNC93B1Q9H1C4 597 aa22.19■■□□□ 1.14
COL9A3-203ENST00000462700 MTMR7Q9Y216 660 aa22.19■■□□□ 1.14
COL9A3-203ENST00000462700 DOCK3Q8IZD9 2030 aa22.19■■□□□ 1.14
COL9A3-203ENST00000462700 STRNO43815 780 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms