RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 TMTC3Q6ZXV5 915 aa3.96□□□□□ -1.78
COL8A1-204ENST00000462604 USP49Q70CQ1 688 aa3.96□□□□□ -1.78
COL8A1-204ENST00000462604 APTXQ7Z2E3 356 aaKnown RBP3.96□□□□□ -1.78
COL8A1-204ENST00000462604 KIAA1328Q86T90 577 aa3.96□□□□□ -1.78
COL8A1-204ENST00000462604 IQCA1Q86XH1 822 aa3.96□□□□□ -1.78
COL8A1-204ENST00000462604 DZIP3Q86Y13 1208 aaKnown RBP3.96□□□□□ -1.78
COL8A1-204ENST00000462604 SMYD4Q8IYR2 804 aaPredicted RBP3.96□□□□□ -1.78
COL8A1-204ENST00000462604 MIGA1Q8NAN2 632 aa3.96□□□□□ -1.78
COL8A1-204ENST00000462604 RASSF8Q8NHQ8 419 aa3.96□□□□□ -1.78
COL8A1-204ENST00000462604 NKX2-3Q8TAU0 364 aa3.96□□□□□ -1.78
COL8A1-204ENST00000462604 CAGE1Q8TC20 777 aa3.96□□□□□ -1.78
COL8A1-204ENST00000462604 AFAP1L1Q8TED9 768 aa3.96□□□□□ -1.78
COL8A1-204ENST00000462604 RUBCNQ92622 972 aa3.96□□□□□ -1.78
COL8A1-204ENST00000462604 IQCDQ96DY2 449 aa3.96□□□□□ -1.78
COL8A1-204ENST00000462604 EPSTI1Q96J88 318 aa3.96□□□□□ -1.78
COL8A1-204ENST00000462604 TRERF1Q96PN7 1200 aa3.96□□□□□ -1.78
COL8A1-204ENST00000462604 MED15Q96RN5 788 aa3.96□□□□□ -1.78
COL8A1-204ENST00000462604 ZSCAN10Q96SZ4 725 aaPredicted RBP3.96□□□□□ -1.78
COL8A1-204ENST00000462604 PNKPQ96T60 521 aa3.96□□□□□ -1.78
COL8A1-204ENST00000462604 CDC5LQ99459 802 aaKnown RBP3.96□□□□□ -1.78
COL8A1-204ENST00000462604 BRIP1Q9BX63 1249 aa3.96□□□□□ -1.78
COL8A1-204ENST00000462604 IRX2Q9BZI1 471 aaPredicted RBP3.96□□□□□ -1.78
COL8A1-204ENST00000462604 TSGA10Q9BZW7 698 aa3.96□□□□□ -1.78
COL8A1-204ENST00000462604 FAM107BQ9H098 131 aa3.96□□□□□ -1.78
COL8A1-204ENST00000462604 HAUS4Q9H6D7 363 aa3.96□□□□□ -1.78
COL8A1-204ENST00000462604 VIPAS39Q9H9C1 493 aa3.96□□□□□ -1.78
COL8A1-204ENST00000462604 ABCB6Q9NP58 842 aa3.96□□□□□ -1.78
COL8A1-204ENST00000462604 ZCCHC17Q9NP64 241 aaKnown RBP3.96□□□□□ -1.78
COL8A1-204ENST00000462604 INCENPQ9NQS7 918 aa3.96□□□□□ -1.78
COL8A1-204ENST00000462604 SEC31BQ9NQW1 1179 aa3.96□□□□□ -1.78
COL8A1-204ENST00000462604 TAB2Q9NYJ8 693 aa3.96□□□□□ -1.78
COL8A1-204ENST00000462604 MKRN1Q9UHC7 482 aaKnown RBP3.96□□□□□ -1.78
COL8A1-204ENST00000462604 FEZ2Q9UHY8 353 aaPredicted RBP3.96□□□□□ -1.78
COL8A1-204ENST00000462604 ADAM21Q9UKJ8 722 aa3.96□□□□□ -1.78
COL8A1-204ENST00000462604 MYO6Q9UM54 1294 aa3.96□□□□□ -1.78
COL8A1-204ENST00000462604 L1RE1Q9UN81 338 aa3.96□□□□□ -1.78
COL8A1-204ENST00000462604 FAN1Q9Y2M0 1017 aa3.96□□□□□ -1.78
COL8A1-204ENST00000462604 RRP15Q9Y3B9 282 aaKnown RBP3.96□□□□□ -1.78
COL8A1-204ENST00000462604 COL5A2P05997 1499 aaPredicted RBP3.96□□□□□ -1.78
COL8A1-204ENST00000462604 BCL9LQ86UU0 1499 aa3.96□□□□□ -1.78
COL8A1-204ENST00000462604 ALS2Q96Q42 1657 aa3.96□□□□□ -1.78
COL8A1-204ENST00000462604 DISP2A7MBM2 1401 aa3.95□□□□□ -1.78
COL8A1-204ENST00000462604 TJP1Q07157 1748 aa3.95□□□□□ -1.78
COL8A1-204ENST00000462604 ANO9A1A5B4 782 aa3.95□□□□□ -1.78
COL8A1-204ENST00000462604 FAM205CA6NFA0 338 aa3.95□□□□□ -1.78
COL8A1-204ENST00000462604 LRRC10BA6NIK2 292 aa3.95□□□□□ -1.78
COL8A1-204ENST00000462604 MINDY4BA8MYZ0 360 aa3.95□□□□□ -1.78
COL8A1-204ENST00000462604 H7C1D1 291 aa3.95□□□□□ -1.78
COL8A1-204ENST00000462604 PES1O00541 588 aaKnown RBP3.95□□□□□ -1.78
COL8A1-204ENST00000462604 PSMA7O14818 248 aa3.95□□□□□ -1.78
COL8A1-204ENST00000462604 KRT86O43790 486 aa3.95□□□□□ -1.78
COL8A1-204ENST00000462604 RNF40O75150 1001 aa3.95□□□□□ -1.78
COL8A1-204ENST00000462604 NDUFA10O95299 355 aa3.95□□□□□ -1.78
COL8A1-204ENST00000462604 PLEKHA8P1O95397 391 aa3.95□□□□□ -1.78
COL8A1-204ENST00000462604 MYL1P05976 194 aa3.95□□□□□ -1.78
COL8A1-204ENST00000462604 PARP1P09874 1014 aaKnown RBP3.95□□□□□ -1.78
COL8A1-204ENST00000462604 CYP19A1P11511 503 aaPredicted RBP3.95□□□□□ -1.78
COL8A1-204ENST00000462604 SCG2P13521 617 aa3.95□□□□□ -1.78
COL8A1-204ENST00000462604 EEF1GP26641 437 aaKnown RBP3.95□□□□□ -1.78
COL8A1-204ENST00000462604 PPP1R2P41236 205 aa3.95□□□□□ -1.78
COL8A1-204ENST00000462604 ARHGAP25P42331 645 aa3.95□□□□□ -1.78
COL8A1-204ENST00000462604 AARSP49588 968 aaKnown RBP eCLIP3.95□□□□□ -1.78
COL8A1-204ENST00000462604 NT5C2P49902 561 aa3.95□□□□□ -1.78
COL8A1-204ENST00000462604 USP14P54578 494 aa3.95□□□□□ -1.78
COL8A1-204ENST00000462604 GYS2P54840 703 aa3.95□□□□□ -1.78
COL8A1-204ENST00000462604 ERVK-24P63145 666 aa3.95□□□□□ -1.78
COL8A1-204ENST00000462604 AMPD2Q01433 879 aa3.95□□□□□ -1.78
COL8A1-204ENST00000462604 FUT2Q10981 343 aa3.95□□□□□ -1.78
COL8A1-204ENST00000462604 PTGDRQ13258 359 aa3.95□□□□□ -1.78
COL8A1-204ENST00000462604 SF3B2Q13435 895 aaKnown RBP3.95□□□□□ -1.78
COL8A1-204ENST00000462604 SEC23AQ15436 765 aa3.95□□□□□ -1.78
COL8A1-204ENST00000462604 E2F4Q16254 413 aa3.95□□□□□ -1.78
COL8A1-204ENST00000462604 PKN1Q16512 942 aa3.95□□□□□ -1.78
COL8A1-204ENST00000462604 HLFQ16534 295 aa3.95□□□□□ -1.78
COL8A1-204ENST00000462604 PARP10Q53GL7 1025 aa3.95□□□□□ -1.78
COL8A1-204ENST00000462604 FKBP15Q5T1M5 1219 aa3.95□□□□□ -1.78
COL8A1-204ENST00000462604 ARL6IP4Q66PJ3 421 aaKnown RBP3.95□□□□□ -1.78
COL8A1-204ENST00000462604 PDXDC2PQ6P474 469 aa3.95□□□□□ -1.78
COL8A1-204ENST00000462604 TMED8Q6PL24 325 aaPredicted RBP3.95□□□□□ -1.78
COL8A1-204ENST00000462604 ZNF662Q6ZS27 426 aa3.95□□□□□ -1.78
COL8A1-204ENST00000462604 TRAPPC11Q7Z392 1133 aa3.95□□□□□ -1.78
COL8A1-204ENST00000462604 SRLQ86TD4 932 aa3.95□□□□□ -1.78
COL8A1-204ENST00000462604 FAM114A1Q8IWE2 563 aa3.95□□□□□ -1.78
COL8A1-204ENST00000462604 DHX37Q8IY37 1157 aaKnown RBP3.95□□□□□ -1.78
COL8A1-204ENST00000462604 CCDC170Q8IYT3 715 aa3.95□□□□□ -1.78
COL8A1-204ENST00000462604 CMTR1Q8N1G2 835 aaKnown RBP3.95□□□□□ -1.78
COL8A1-204ENST00000462604 SYNE4Q8N205 404 aa3.95□□□□□ -1.78
COL8A1-204ENST00000462604 MB21D1Q8N884 522 aa3.95□□□□□ -1.78
COL8A1-204ENST00000462604 ENAHQ8N8S7 591 aaPredicted RBP3.95□□□□□ -1.78
COL8A1-204ENST00000462604 RETREG2Q8NC44 543 aa3.95□□□□□ -1.78
COL8A1-204ENST00000462604 HELBQ8NG08 1087 aaPredicted RBP3.95□□□□□ -1.78
COL8A1-204ENST00000462604 OR8K1Q8NGG5 319 aa3.95□□□□□ -1.78
COL8A1-204ENST00000462604 PIGBQ92521 554 aa3.95□□□□□ -1.78
COL8A1-204ENST00000462604 SMARCC1Q92922 1105 aaPredicted RBP3.95□□□□□ -1.78
COL8A1-204ENST00000462604 TNFRSF25Q93038 417 aa3.95□□□□□ -1.78
COL8A1-204ENST00000462604 JAKMIP2Q96AA8 810 aa3.95□□□□□ -1.78
COL8A1-204ENST00000462604 TRIM47Q96LD4 638 aa3.95□□□□□ -1.78
COL8A1-204ENST00000462604 DNAJC7Q99615 494 aa3.95□□□□□ -1.78
COL8A1-204ENST00000462604 SGIP1Q9BQI5 828 aa3.95□□□□□ -1.78
COL8A1-204ENST00000462604 SLF1Q9BQI6 1058 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms