RNA–Protein interactions for RNA: ENST00000462335.1

PKP4-208, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-208ENST00000462335 ERVK-24P63145 666 aa11.24□□□□□ -0.61
PKP4-208ENST00000462335 IFIT1BQ5T764 474 aaKnown RBP11.24□□□□□ -0.61
PKP4-208ENST00000462335 SIAH1Q8IUQ4 282 aa11.24□□□□□ -0.61
PKP4-208ENST00000462335 PRPF38AQ8NAV1 312 aaKnown RBP11.24□□□□□ -0.61
PKP4-208ENST00000462335 GMCL1P1Q8NEA9 526 aa11.24□□□□□ -0.61
PKP4-208ENST00000462335 ZSCAN10Q96SZ4 725 aaPredicted RBP11.24□□□□□ -0.61
PKP4-208ENST00000462335 SLF1Q9BQI6 1058 aa11.24□□□□□ -0.61
PKP4-208ENST00000462335 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.24□□□□□ -0.61
PKP4-208ENST00000462335 TCP11L1Q9NUJ3 509 aa11.24□□□□□ -0.61
PKP4-208ENST00000462335 ZSWIM5Q9P217 1185 aa11.24□□□□□ -0.61
PKP4-208ENST00000462335 PTPRFP10586 1907 aa11.24□□□□□ -0.61
PKP4-208ENST00000462335 IGKV6D-41A0A0C4DH26 115 aa11.23□□□□□ -0.61
PKP4-208ENST00000462335 TMEM232C9JQI7 657 aa11.23□□□□□ -0.61
PKP4-208ENST00000462335 E7EWF7 191 aa11.23□□□□□ -0.61
PKP4-208ENST00000462335 DHX16O60231 1041 aaKnown RBP11.23□□□□□ -0.61
PKP4-208ENST00000462335 FGRP09769 529 aa11.23□□□□□ -0.61
PKP4-208ENST00000462335 BCRP11274 1271 aa11.23□□□□□ -0.61
PKP4-208ENST00000462335 DSG3P32926 999 aa11.23□□□□□ -0.61
PKP4-208ENST00000462335 STAT2P52630 851 aa11.23□□□□□ -0.61
PKP4-208ENST00000462335 KRT32Q14532 448 aa11.23□□□□□ -0.61
PKP4-208ENST00000462335 SLC9C1Q4G0N8 1177 aa11.23□□□□□ -0.61
PKP4-208ENST00000462335 NFXL1Q6ZNB6 911 aa11.23□□□□□ -0.61
PKP4-208ENST00000462335 FAM160B2Q86V87 743 aa11.23□□□□□ -0.61
PKP4-208ENST00000462335 NCAPG2Q86XI2 1143 aa11.23□□□□□ -0.61
PKP4-208ENST00000462335 DGKHQ86XP1 1220 aa11.23□□□□□ -0.61
PKP4-208ENST00000462335 DCAF4Q8WV16 495 aa11.23□□□□□ -0.61
PKP4-208ENST00000462335 TRIM47Q96LD4 638 aa11.23□□□□□ -0.61
PKP4-208ENST00000462335 NUP88Q99567 741 aaPredicted RBP11.23□□□□□ -0.61
PKP4-208ENST00000462335 MYPNQ86TC9 1320 aa11.23□□□□□ -0.61
PKP4-208ENST00000462335 MYH4Q9Y623 1939 aa11.23□□□□□ -0.61
PKP4-208ENST00000462335 CYP21A2P08686 494 aa11.22□□□□□ -0.61
PKP4-208ENST00000462335 FDX1P10109 184 aa11.22□□□□□ -0.61
PKP4-208ENST00000462335 MCM5P33992 734 aa11.22□□□□□ -0.61
PKP4-208ENST00000462335 COPB2P35606 906 aa11.22□□□□□ -0.61
PKP4-208ENST00000462335 NEDD4P46934 1319 aa11.22□□□□□ -0.61
PKP4-208ENST00000462335 WTAPQ15007 396 aa11.22□□□□□ -0.61
PKP4-208ENST00000462335 CREB3L3Q68CJ9 461 aa11.22□□□□□ -0.61
PKP4-208ENST00000462335 RCSD1Q6JBY9 416 aa11.22□□□□□ -0.61
PKP4-208ENST00000462335 SYNE3Q6ZMZ3 975 aa11.22□□□□□ -0.61
PKP4-208ENST00000462335 PLEKHH3Q7Z736 793 aa11.22□□□□□ -0.61
PKP4-208ENST00000462335 CPXCR1Q8N123 301 aa11.22□□□□□ -0.61
PKP4-208ENST00000462335 GMCL1Q96IK5 515 aa11.22□□□□□ -0.61
PKP4-208ENST00000462335 PLIN4Q96Q06 1357 aa11.22□□□□□ -0.61
PKP4-208ENST00000462335 NUDT12Q9BQG2 462 aa11.22□□□□□ -0.61
PKP4-208ENST00000462335 TMEM47Q9BQJ4 181 aa11.22□□□□□ -0.61
PKP4-208ENST00000462335 ARHGAP39Q9C0H5 1083 aa11.22□□□□□ -0.61
PKP4-208ENST00000462335 IL25Q9H293 177 aa11.22□□□□□ -0.61
PKP4-208ENST00000462335 GPCPD1Q9NPB8 672 aa11.22□□□□□ -0.61
PKP4-208ENST00000462335 IL17RBQ9NRM6 502 aa11.22□□□□□ -0.61
PKP4-208ENST00000462335 SLC5A4Q9NY91 659 aa11.22□□□□□ -0.61
PKP4-208ENST00000462335 RBPJLQ9UBG7 517 aa11.22□□□□□ -0.61
PKP4-208ENST00000462335 MORF4L1Q9UBU8 362 aa11.22□□□□□ -0.61
PKP4-208ENST00000462335 SRRDQ9UH36 339 aa11.22□□□□□ -0.61
PKP4-208ENST00000462335 PTPN22Q9Y2R2 807 aa11.22□□□□□ -0.61
PKP4-208ENST00000462335 LOC285556D6RIA3 1793 aa11.21□□□□□ -0.61
PKP4-208ENST00000462335 TNKSO95271 1327 aa11.21□□□□□ -0.61
PKP4-208ENST00000462335 SPDYE16A6NNV3 312 aaPredicted RBP11.21□□□□□ -0.61
PKP4-208ENST00000462335 SLC27A2O14975 620 aa11.21□□□□□ -0.61
PKP4-208ENST00000462335 SLC25A27O95847 323 aa11.21□□□□□ -0.61
PKP4-208ENST00000462335 UBXN2AP68543 259 aa11.21□□□□□ -0.61
PKP4-208ENST00000462335 TMEM67Q5HYA8 995 aa11.21□□□□□ -0.61
PKP4-208ENST00000462335 KIAA1755Q5JYT7 1200 aa11.21□□□□□ -0.61
PKP4-208ENST00000462335 KCTD1Q719H9 257 aa11.21□□□□□ -0.61
PKP4-208ENST00000462335 CATIPQ7Z7H3 387 aa11.21□□□□□ -0.61
PKP4-208ENST00000462335 DPP9Q86TI2 863 aa11.21□□□□□ -0.61
PKP4-208ENST00000462335 TMTC2Q8N394 836 aa11.21□□□□□ -0.61
PKP4-208ENST00000462335 PNMA1Q8ND90 353 aa11.21□□□□□ -0.61
PKP4-208ENST00000462335 ATG4CQ96DT6 458 aa11.21□□□□□ -0.61
PKP4-208ENST00000462335 ABHD8Q96I13 439 aa11.21□□□□□ -0.61
PKP4-208ENST00000462335 TMEM106CQ9BVX2 250 aa11.21□□□□□ -0.61
PKP4-208ENST00000462335 LSG1Q9H089 658 aaKnown RBP11.21□□□□□ -0.61
PKP4-208ENST00000462335 SPATC1LQ9H0A9 340 aa11.21□□□□□ -0.61
PKP4-208ENST00000462335 MROH8Q9H579 483 aa11.21□□□□□ -0.61
PKP4-208ENST00000462335 FBXO28Q9NVF7 368 aa11.21□□□□□ -0.61
PKP4-208ENST00000462335 PPP1R9AQ9ULJ8 1098 aa11.21□□□□□ -0.61
PKP4-208ENST00000462335 ADGRA2Q96PE1 1338 aa11.2□□□□□ -0.62
PKP4-208ENST00000462335 CCDC69A6NI79 296 aa11.2□□□□□ -0.62
PKP4-208ENST00000462335 VWA5AO00534 786 aa11.2□□□□□ -0.62
PKP4-208ENST00000462335 HMGB1P09429 215 aaKnown RBP11.2□□□□□ -0.62
PKP4-208ENST00000462335 PARP1P09874 1014 aaKnown RBP11.2□□□□□ -0.62
PKP4-208ENST00000462335 STAT3P40763 770 aa11.2□□□□□ -0.62
PKP4-208ENST00000462335 FLT3LGP49771 235 aa11.2□□□□□ -0.62
PKP4-208ENST00000462335 LBX2Q6XYB7 198 aa11.2□□□□□ -0.62
PKP4-208ENST00000462335 SOCS4Q8WXH5 440 aa11.2□□□□□ -0.62
PKP4-208ENST00000462335 NBPF3Q9H094 633 aa11.2□□□□□ -0.62
PKP4-208ENST00000462335 TXNRD2Q9NNW7 524 aa11.2□□□□□ -0.62
PKP4-208ENST00000462335 NAP1L2Q9ULW6 460 aaPredicted RBP11.2□□□□□ -0.62
PKP4-208ENST00000462335 HPS5Q9UPZ3 1129 aa11.2□□□□□ -0.62
PKP4-208ENST00000462335 FRMPD2Q68DX3 1309 aaPredicted RBP11.19□□□□□ -0.62
PKP4-208ENST00000462335 PRC1O43663 620 aa11.19□□□□□ -0.62
PKP4-208ENST00000462335 STRNO43815 780 aa11.19□□□□□ -0.62
PKP4-208ENST00000462335 ADCY3O60266 1144 aa11.19□□□□□ -0.62
PKP4-208ENST00000462335 MYCP01106 439 aaPredicted RBP11.19□□□□□ -0.62
PKP4-208ENST00000462335 FCER1AP12319 257 aa11.19□□□□□ -0.62
PKP4-208ENST00000462335 CYP2B6P20813 491 aa11.19□□□□□ -0.62
PKP4-208ENST00000462335 PSMA5P28066 241 aa11.19□□□□□ -0.62
PKP4-208ENST00000462335 GRK4P32298 578 aa11.19□□□□□ -0.62
PKP4-208ENST00000462335 RGS2P41220 211 aa11.19□□□□□ -0.62
PKP4-208ENST00000462335 PRKCZQ05513 592 aa11.19□□□□□ -0.62
PKP4-208ENST00000462335 KCTD2Q14681 263 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms