RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 FAM160B2Q86V87 743 aa12.4□□□□□ -0.42
RTF1-202ENST00000462276 CLEC10AQ8IUN9 316 aa12.4□□□□□ -0.42
RTF1-202ENST00000462276 SMARCC2Q8TAQ2 1214 aa12.4□□□□□ -0.42
RTF1-202ENST00000462276 HHIPL1Q96JK4 782 aa12.4□□□□□ -0.42
RTF1-202ENST00000462276 MYL10Q9BUA6 226 aa12.4□□□□□ -0.42
RTF1-202ENST00000462276 RNF26Q9BY78 433 aaPredicted RBP12.4□□□□□ -0.42
RTF1-202ENST00000462276 TMOD4Q9NZQ9 345 aa12.4□□□□□ -0.42
RTF1-202ENST00000462276 MAD2L2Q9UI95 211 aa12.4□□□□□ -0.42
RTF1-202ENST00000462276 PNMA2Q9UL42 364 aa12.4□□□□□ -0.42
RTF1-202ENST00000462276 KCNH4Q9UQ05 1017 aa12.4□□□□□ -0.42
RTF1-202ENST00000462276 STK36Q9NRP7 1315 aa12.39□□□□□ -0.43
RTF1-202ENST00000462276 PRPF3O43395 683 aaKnown RBP12.39□□□□□ -0.43
RTF1-202ENST00000462276 ZBTB48P10074 688 aaPredicted RBP12.39□□□□□ -0.43
RTF1-202ENST00000462276 CDC27P30260 824 aa12.39□□□□□ -0.43
RTF1-202ENST00000462276 ECE1P42892 770 aa12.39□□□□□ -0.43
RTF1-202ENST00000462276 SSRP1Q08945 709 aaKnown RBP12.39□□□□□ -0.43
RTF1-202ENST00000462276 BTNL9Q6UXG8 535 aa12.39□□□□□ -0.43
RTF1-202ENST00000462276 NSUN7Q8NE18 718 aaKnown RBP12.39□□□□□ -0.43
RTF1-202ENST00000462276 ELP3Q9H9T3 547 aa12.39□□□□□ -0.43
RTF1-202ENST00000462276 NCOA5Q9HCD5 579 aaKnown RBP12.39□□□□□ -0.43
RTF1-202ENST00000462276 FEM1BQ9UK73 627 aa12.39□□□□□ -0.43
RTF1-202ENST00000462276 TRIM75PA6NK02 468 aa12.38□□□□□ -0.43
RTF1-202ENST00000462276 DEXIO95424 95 aa12.38□□□□□ -0.43
RTF1-202ENST00000462276 FMNL1O95466 1100 aaPredicted RBP12.38□□□□□ -0.43
RTF1-202ENST00000462276 RXRAP19793 462 aa12.38□□□□□ -0.43
RTF1-202ENST00000462276 HUNKP57058 714 aa12.38□□□□□ -0.43
RTF1-202ENST00000462276 FUT2Q10981 343 aa12.38□□□□□ -0.43
RTF1-202ENST00000462276 ST3GAL1Q11201 340 aa12.38□□□□□ -0.43
RTF1-202ENST00000462276 SNAPC2Q13487 334 aa12.38□□□□□ -0.43
RTF1-202ENST00000462276 MTMR2Q13614 643 aa12.38□□□□□ -0.43
RTF1-202ENST00000462276 CCDC96Q2M329 555 aa12.38□□□□□ -0.43
RTF1-202ENST00000462276 MOB2Q70IA6 237 aa12.38□□□□□ -0.43
RTF1-202ENST00000462276 TEX2Q8IWB9 1127 aa12.38□□□□□ -0.43
RTF1-202ENST00000462276 CCDC144CPQ8IYA2 1237 aa12.38□□□□□ -0.43
RTF1-202ENST00000462276 FAM184AQ8NB25 1140 aa12.38□□□□□ -0.43
RTF1-202ENST00000462276 PROCA1Q8NCQ7 364 aaPredicted RBP12.38□□□□□ -0.43
RTF1-202ENST00000462276 CLMNQ96JQ2 1002 aa12.38□□□□□ -0.43
RTF1-202ENST00000462276 RIOX1Q9H6W3 641 aa12.38□□□□□ -0.43
RTF1-202ENST00000462276 EMILIN3Q9NT22 766 aa12.38□□□□□ -0.43
RTF1-202ENST00000462276 ORC3Q9UBD5 711 aaPredicted RBP12.38□□□□□ -0.43
RTF1-202ENST00000462276 CIZ1Q9ULV3 898 aaPredicted RBP12.38□□□□□ -0.43
RTF1-202ENST00000462276 FZD1Q9UP38 647 aa12.38□□□□□ -0.43
RTF1-202ENST00000462276 SIPA1L1O43166 1804 aa12.38□□□□□ -0.43
RTF1-202ENST00000462276 A0A0G2JLL6 359 aaPredicted RBP12.37□□□□□ -0.43
RTF1-202ENST00000462276 PTPDC1A2A3K4 754 aa12.37□□□□□ -0.43
RTF1-202ENST00000462276 TMEM88BA6NKF7 163 aa12.37□□□□□ -0.43
RTF1-202ENST00000462276 hCG_1984214I3L0E3 225 aa12.37□□□□□ -0.43
RTF1-202ENST00000462276 IRF6O14896 467 aa12.37□□□□□ -0.43
RTF1-202ENST00000462276 RAD21O60216 631 aa12.37□□□□□ -0.43
RTF1-202ENST00000462276 CTDNEP1O95476 244 aa12.37□□□□□ -0.43
RTF1-202ENST00000462276 CETPP11597 493 aa12.37□□□□□ -0.43
RTF1-202ENST00000462276 XBP1P17861 261 aa12.37□□□□□ -0.43
RTF1-202ENST00000462276 STAT2P52630 851 aa12.37□□□□□ -0.43
RTF1-202ENST00000462276 GTF2A2P52657 109 aa12.37□□□□□ -0.43
RTF1-202ENST00000462276 PABPC4Q13310 644 aaKnown RBP eCLIP12.37□□□□□ -0.43
RTF1-202ENST00000462276 PRRT2Q7Z6L0 340 aaPredicted RBP12.37□□□□□ -0.43
RTF1-202ENST00000462276 NBPF11Q86T75 865 aa12.37□□□□□ -0.43
RTF1-202ENST00000462276 SAPCD2Q86UD0 394 aa12.37□□□□□ -0.43
RTF1-202ENST00000462276 SRBD1Q8N5C6 995 aaKnown RBP12.37□□□□□ -0.43
RTF1-202ENST00000462276 DNAJC5GQ8N7S2 189 aa12.37□□□□□ -0.43
RTF1-202ENST00000462276 ZNF713Q8N859 430 aaPredicted RBP12.37□□□□□ -0.43
RTF1-202ENST00000462276 PRPF38AQ8NAV1 312 aaKnown RBP12.37□□□□□ -0.43
RTF1-202ENST00000462276 CCDC102AQ96A19 550 aa12.37□□□□□ -0.43
RTF1-202ENST00000462276 OPTNQ96CV9 577 aa12.37□□□□□ -0.43
RTF1-202ENST00000462276 RRP36Q96EU6 259 aaKnown RBP12.37□□□□□ -0.43
RTF1-202ENST00000462276 OTUD5Q96G74 571 aa12.37□□□□□ -0.43
RTF1-202ENST00000462276 HOXC10Q9NYD6 342 aa12.37□□□□□ -0.43
RTF1-202ENST00000462276 V9GY48 417 aaPredicted RBP12.37□□□□□ -0.43
RTF1-202ENST00000462276 MYPNQ86TC9 1320 aa12.37□□□□□ -0.43
RTF1-202ENST00000462276 USP17L15C9J2P7 530 aa12.36□□□□□ -0.43
RTF1-202ENST00000462276 USP17L13C9JLJ4 530 aa12.36□□□□□ -0.43
RTF1-202ENST00000462276 TMEM232C9JQI7 657 aa12.36□□□□□ -0.43
RTF1-202ENST00000462276 USP17L11C9JVI0 530 aa12.36□□□□□ -0.43
RTF1-202ENST00000462276 USP17L18D6R9N7 530 aa12.36□□□□□ -0.43
RTF1-202ENST00000462276 USP17L22D6RA61 530 aa12.36□□□□□ -0.43
RTF1-202ENST00000462276 USP17L17D6RBQ6 530 aa12.36□□□□□ -0.43
RTF1-202ENST00000462276 USP17L19D6RCP7 530 aa12.36□□□□□ -0.43
RTF1-202ENST00000462276 USP17L20D6RJB6 530 aa12.36□□□□□ -0.43
RTF1-202ENST00000462276 VCAM1P19320 739 aa12.36□□□□□ -0.43
RTF1-202ENST00000462276 GJB2P29033 226 aa12.36□□□□□ -0.43
RTF1-202ENST00000462276 HOXA7P31268 230 aaPredicted RBP12.36□□□□□ -0.43
RTF1-202ENST00000462276 HMGCS2P54868 508 aa12.36□□□□□ -0.43
RTF1-202ENST00000462276 INHBEP58166 350 aa12.36□□□□□ -0.43
RTF1-202ENST00000462276 FMR1Q06787 632 aaKnown RBP eCLIP12.36□□□□□ -0.431e-6■■■□□ 18.6
RTF1-202ENST00000462276 USP17L24Q0WX57 530 aa12.36□□□□□ -0.43
RTF1-202ENST00000462276 SPRYD7Q5W111 196 aa12.36□□□□□ -0.43
RTF1-202ENST00000462276 RAB11FIP4Q86YS3 637 aa12.36□□□□□ -0.43
RTF1-202ENST00000462276 SPICE1Q8N0Z3 855 aa12.36□□□□□ -0.43
RTF1-202ENST00000462276 STAG2Q8N3U4 1231 aa12.36□□□□□ -0.43
RTF1-202ENST00000462276 SLC26A6Q9BXS9 759 aa12.36□□□□□ -0.43
RTF1-202ENST00000462276 GPCPD1Q9NPB8 672 aa12.36□□□□□ -0.43
RTF1-202ENST00000462276 SEC63Q9UGP8 760 aaKnown RBP12.36□□□□□ -0.43
RTF1-202ENST00000462276 MTMR7Q9Y216 660 aa12.36□□□□□ -0.43
RTF1-202ENST00000462276 SLC45A1Q9Y2W3 748 aa12.36□□□□□ -0.43
RTF1-202ENST00000462276 TLL2Q9Y6L7 1015 aa12.36□□□□□ -0.43
RTF1-202ENST00000462276 PAPPA2Q9BXP8 1791 aa12.35□□□□□ -0.43
RTF1-202ENST00000462276 PNMA6FA0A0J9YX94 578 aa12.35□□□□□ -0.43
RTF1-202ENST00000462276 PLEKHA8P1O95397 391 aa12.35□□□□□ -0.43
RTF1-202ENST00000462276 GOLGA8HP0CJ92 632 aa12.35□□□□□ -0.43
RTF1-202ENST00000462276 SLC4A3P48751 1232 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms