RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 XPNPEP3Q9NQH7 507 aa13.14□□□□□ -0.31
CBX3-205ENST00000462165 SWAP70Q9UH65 585 aa13.14□□□□□ -0.31
CBX3-205ENST00000462165 TMX2Q9Y320 296 aa13.14□□□□□ -0.31
CBX3-205ENST00000462165 ROBO3Q96MS0 1386 aa13.14□□□□□ -0.31
CBX3-205ENST00000462165 KIAA0355O15063 1070 aa13.13□□□□□ -0.31
CBX3-205ENST00000462165 WDR46O15213 610 aaKnown RBP13.13□□□□□ -0.31
CBX3-205ENST00000462165 RARBP10826 455 aa13.13□□□□□ -0.31
CBX3-205ENST00000462165 FOSL2P15408 326 aa13.13□□□□□ -0.31
CBX3-205ENST00000462165 ITGB8P26012 769 aa13.13□□□□□ -0.31
CBX3-205ENST00000462165 ICA1Q05084 483 aa13.13□□□□□ -0.31
CBX3-205ENST00000462165 TMEM132BQ14DG7 1078 aa13.13□□□□□ -0.31
CBX3-205ENST00000462165 CEP85Q6P2H3 762 aa13.13□□□□□ -0.31
CBX3-205ENST00000462165 RNF180Q86T96 592 aa13.13□□□□□ -0.31
CBX3-205ENST00000462165 ERC1Q8IUD2 1116 aa13.13□□□□□ -0.31
CBX3-205ENST00000462165 SLC44A5Q8NCS7 719 aa13.13□□□□□ -0.31
CBX3-205ENST00000462165 SDR42E1Q8WUS8 393 aa13.13□□□□□ -0.31
CBX3-205ENST00000462165 SYMPKQ92797 1274 aaKnown RBP13.13□□□□□ -0.31
CBX3-205ENST00000462165 ADAMTS5Q9UNA0 930 aa13.13□□□□□ -0.31
CBX3-205ENST00000462165 DIS3Q9Y2L1 958 aaKnown RBP13.13□□□□□ -0.31
CBX3-205ENST00000462165 ZNF532Q9HCE3 1301 aa13.13□□□□□ -0.31
CBX3-205ENST00000462165 MYH7P12883 1935 aa13.12□□□□□ -0.31
CBX3-205ENST00000462165 TCRBV5S4A2TA0A5A2 114 aa13.12□□□□□ -0.31
CBX3-205ENST00000462165 CCER2I3L3R5 266 aa13.12□□□□□ -0.31
CBX3-205ENST00000462165 EPHB4P54760 987 aa13.12□□□□□ -0.31
CBX3-205ENST00000462165 RIOX2Q8IUF8 465 aa13.12□□□□□ -0.31
CBX3-205ENST00000462165 ITPRIPQ8IWB1 547 aa13.12□□□□□ -0.31
CBX3-205ENST00000462165 FTSJ3Q8IY81 847 aaKnown RBP13.12□□□□□ -0.31
CBX3-205ENST00000462165 SPICE1Q8N0Z3 855 aa13.12□□□□□ -0.31
CBX3-205ENST00000462165 LCORLQ8N3X6 602 aa13.12□□□□□ -0.31
CBX3-205ENST00000462165 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.12□□□□□ -0.31
CBX3-205ENST00000462165 DYNLL2Q96FJ2 89 aa13.12□□□□□ -0.31
CBX3-205ENST00000462165 RNPC3Q96LT9 517 aaKnown RBP13.12□□□□□ -0.31
CBX3-205ENST00000462165 TINF2Q9BSI4 451 aa13.12□□□□□ -0.31
CBX3-205ENST00000462165 PRDM6Q9NQX0 595 aa13.12□□□□□ -0.31
CBX3-205ENST00000462165 EXOC6BQ9Y2D4 811 aa13.12□□□□□ -0.31
CBX3-205ENST00000462165 A0A1W2PQ45 241 aaPredicted RBP13.11□□□□□ -0.31
CBX3-205ENST00000462165 A0A1W2PQY0 241 aa13.11□□□□□ -0.31
CBX3-205ENST00000462165 PITPNM1O00562 1244 aa13.11□□□□□ -0.31
CBX3-205ENST00000462165 PGK1P00558 417 aa13.11□□□□□ -0.31
CBX3-205ENST00000462165 ZNF865P0CJ78 1059 aaPredicted RBP13.11□□□□□ -0.31
CBX3-205ENST00000462165 CYP2D6P10635 497 aa13.11□□□□□ -0.31
CBX3-205ENST00000462165 RLBP1P12271 317 aa13.11□□□□□ -0.31
CBX3-205ENST00000462165 AKR1B1P15121 316 aa13.11□□□□□ -0.31
CBX3-205ENST00000462165 RAG1P15918 1043 aa13.11□□□□□ -0.31
CBX3-205ENST00000462165 ZNF792Q3KQV3 632 aa13.11□□□□□ -0.31
CBX3-205ENST00000462165 CLEC10AQ8IUN9 316 aa13.11□□□□□ -0.31
CBX3-205ENST00000462165 CCDC17Q96LX7 622 aa13.11□□□□□ -0.31
CBX3-205ENST00000462165 MMP19Q99542 508 aa13.11□□□□□ -0.31
CBX3-205ENST00000462165 CHD9Q3L8U1 2897 aa13.11□□□□□ -0.31
CBX3-205ENST00000462165 GREB1LQ9C091 1923 aaPredicted RBP13.1□□□□□ -0.31
CBX3-205ENST00000462165 PQBP1O60828 265 aaKnown RBP13.1□□□□□ -0.31
CBX3-205ENST00000462165 ADAMTS4O75173 837 aa13.1□□□□□ -0.31
CBX3-205ENST00000462165 AKR1A1P14550 325 aa13.1□□□□□ -0.31
CBX3-205ENST00000462165 TAL1P17542 331 aaPredicted RBP13.1□□□□□ -0.31
CBX3-205ENST00000462165 FAAP100Q0VG06 881 aa13.1□□□□□ -0.31
CBX3-205ENST00000462165 KCTD2Q14681 263 aa13.1□□□□□ -0.31
CBX3-205ENST00000462165 HSP90AB4PQ58FF6 505 aa13.1□□□□□ -0.31
CBX3-205ENST00000462165 ANKRD33Q7Z3H0 272 aa13.1□□□□□ -0.31
CBX3-205ENST00000462165 TOX2Q96NM4 488 aa13.1□□□□□ -0.31
CBX3-205ENST00000462165 TSEN34Q9BSV6 310 aaKnown RBP13.1□□□□□ -0.31
CBX3-205ENST00000462165 IL1RAPL2Q9NP60 686 aa13.1□□□□□ -0.31
CBX3-205ENST00000462165 ATP8A2Q9NTI2 1148 aa13.1□□□□□ -0.31
CBX3-205ENST00000462165 TMEM39AQ9NV64 488 aa13.1□□□□□ -0.31
CBX3-205ENST00000462165 ZNF214Q9UL59 606 aaPredicted RBP13.1□□□□□ -0.31
CBX3-205ENST00000462165 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.09□□□□□ -0.31
CBX3-205ENST00000462165 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.09□□□□□ -0.31
CBX3-205ENST00000462165 GOLIM4O00461 696 aa13.09□□□□□ -0.31
CBX3-205ENST00000462165 VWA5AO00534 786 aa13.09□□□□□ -0.31
CBX3-205ENST00000462165 PGK2P07205 417 aa13.09□□□□□ -0.31
CBX3-205ENST00000462165 DNAJB2P25686 324 aa13.09□□□□□ -0.31
CBX3-205ENST00000462165 COPB2P35606 906 aa13.09□□□□□ -0.31
CBX3-205ENST00000462165 STAT3P40763 770 aa13.09□□□□□ -0.31
CBX3-205ENST00000462165 FPGSQ05932 587 aa13.09□□□□□ -0.31
CBX3-205ENST00000462165 C12orf60Q5U649 245 aa13.09□□□□□ -0.31
CBX3-205ENST00000462165 REPS2Q8NFH8 660 aa13.09□□□□□ -0.31
CBX3-205ENST00000462165 RHPN1Q8TCX5 695 aa13.09□□□□□ -0.31
CBX3-205ENST00000462165 SP7Q8TDD2 431 aaPredicted RBP13.09□□□□□ -0.31
CBX3-205ENST00000462165 DNAJC2Q99543 621 aaKnown RBP13.09□□□□□ -0.31
CBX3-205ENST00000462165 ARMT1Q9H993 441 aa13.09□□□□□ -0.31
CBX3-205ENST00000462165 FBXO28Q9NVF7 368 aa13.09□□□□□ -0.31
CBX3-205ENST00000462165 PPP1R9AQ9ULJ8 1098 aa13.09□□□□□ -0.31
CBX3-205ENST00000462165 REV3LO60673 3130 aa13.08□□□□□ -0.31
CBX3-205ENST00000462165 MOXD2PA6NHM9 499 aa13.08□□□□□ -0.32
CBX3-205ENST00000462165 PRKAB2O43741 272 aa13.08□□□□□ -0.32
CBX3-205ENST00000462165 EEF2P13639 858 aaKnown RBP13.08□□□□□ -0.32
CBX3-205ENST00000462165 CDK8P49336 464 aa13.08□□□□□ -0.32
CBX3-205ENST00000462165 ACLYP53396 1101 aa13.08□□□□□ -0.32
CBX3-205ENST00000462165 GRIN2CQ14957 1233 aa13.08□□□□□ -0.32
CBX3-205ENST00000462165 TJAP1Q5JTD0 557 aa13.08□□□□□ -0.32
CBX3-205ENST00000462165 C16orf86Q6ZW13 317 aa13.08□□□□□ -0.32
CBX3-205ENST00000462165 CLASRPQ8N2M8 674 aaKnown RBP13.08□□□□□ -0.32
CBX3-205ENST00000462165 MSL3Q8N5Y2 521 aaKnown RBP13.08□□□□□ -0.32
CBX3-205ENST00000462165 KLHDC9Q8NEP7 349 aa13.08□□□□□ -0.32
CBX3-205ENST00000462165 NUP133Q8WUM0 1156 aa13.08□□□□□ -0.32
CBX3-205ENST00000462165 KANSL2Q9H9L4 492 aa13.08□□□□□ -0.32
CBX3-205ENST00000462165 STARD7Q9NQZ5 370 aa13.08□□□□□ -0.32
CBX3-205ENST00000462165 CHD7Q9P2D1 2997 aa13.08□□□□□ -0.32
CBX3-205ENST00000462165 TTC28Q96AY4 2481 aa13.08□□□□□ -0.32
CBX3-205ENST00000462165 MCM3APO60318 1980 aa13.07□□□□□ -0.32
CBX3-205ENST00000462165 DCDC2CA8MYV0 355 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms