RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 CALM3P0DP25 149 aa17.71■□□□□ 0.43
TMEM39A-203ENST00000461654 METAP2P50579 478 aaKnown RBP eCLIP17.71■□□□□ 0.43
TMEM39A-203ENST00000461654 RCAN1P53805 252 aa17.71■□□□□ 0.43
TMEM39A-203ENST00000461654 RRP1BQ14684 758 aaKnown RBP17.71■□□□□ 0.43
TMEM39A-203ENST00000461654 SEC23AQ15436 765 aa17.71■□□□□ 0.43
TMEM39A-203ENST00000461654 APOA5Q6Q788 366 aa17.71■□□□□ 0.43
TMEM39A-203ENST00000461654 PARK7Q99497 189 aaKnown RBP17.71■□□□□ 0.43
TMEM39A-203ENST00000461654 LLPHQ9BRT6 129 aaKnown RBP17.71■□□□□ 0.43
TMEM39A-203ENST00000461654 KAT14Q9H8E8 782 aa17.71■□□□□ 0.43
TMEM39A-203ENST00000461654 GINM1Q9NU53 330 aa17.71■□□□□ 0.43
TMEM39A-203ENST00000461654 DOCK1Q14185 1865 aa17.7■□□□□ 0.42
TMEM39A-203ENST00000461654 GOLGA8AA7E2F4 631 aa17.7■□□□□ 0.42
TMEM39A-203ENST00000461654 MPHOSPH10O00566 681 aaKnown RBP17.7■□□□□ 0.42
TMEM39A-203ENST00000461654 SHMT1P34896 483 aa17.7■□□□□ 0.42
TMEM39A-203ENST00000461654 PRMT2P55345 433 aa17.7■□□□□ 0.42
TMEM39A-203ENST00000461654 SOX10P56693 466 aa17.7■□□□□ 0.42
TMEM39A-203ENST00000461654 CCT2P78371 535 aaKnown RBP17.7■□□□□ 0.42
TMEM39A-203ENST00000461654 KIF22Q14807 665 aa17.7■□□□□ 0.42
TMEM39A-203ENST00000461654 CERKLQ49MI3 558 aaPredicted RBP17.7■□□□□ 0.42
TMEM39A-203ENST00000461654 ZNF280CQ8ND82 737 aa17.7■□□□□ 0.42
TMEM39A-203ENST00000461654 ARMC5Q96C12 935 aa17.7■□□□□ 0.42
TMEM39A-203ENST00000461654 KIF3AQ9Y496 699 aa17.7■□□□□ 0.42
TMEM39A-203ENST00000461654 CCDC196A0A1B0GTZ2 297 aa17.69■□□□□ 0.42
TMEM39A-203ENST00000461654 USP17L5A8MUK1 530 aa17.69■□□□□ 0.42
TMEM39A-203ENST00000461654 CDKL5O76039 1030 aa17.69■□□□□ 0.42
TMEM39A-203ENST00000461654 SCRN1Q12765 414 aa17.69■□□□□ 0.42
TMEM39A-203ENST00000461654 PPP2R5BQ15173 497 aa17.69■□□□□ 0.42
TMEM39A-203ENST00000461654 MICU3Q86XE3 530 aa17.69■□□□□ 0.42
TMEM39A-203ENST00000461654 ZNF654Q8IZM8 581 aa17.69■□□□□ 0.42
TMEM39A-203ENST00000461654 WDR18Q9BV38 432 aa17.69■□□□□ 0.42
TMEM39A-203ENST00000461654 CPA4Q9UI42 421 aa17.69■□□□□ 0.42
TMEM39A-203ENST00000461654 STX8Q9UNK0 236 aa17.69■□□□□ 0.42
TMEM39A-203ENST00000461654 PHIPQ8WWQ0 1821 aa17.68■□□□□ 0.42
TMEM39A-203ENST00000461654 TRIM75PA6NK02 468 aa17.68■□□□□ 0.42
TMEM39A-203ENST00000461654 NMT2O60551 498 aa17.68■□□□□ 0.42
TMEM39A-203ENST00000461654 DDAH1O94760 285 aa17.68■□□□□ 0.42
TMEM39A-203ENST00000461654 ASNSP08243 561 aa17.68■□□□□ 0.42
TMEM39A-203ENST00000461654 BCRP11274 1271 aa17.68■□□□□ 0.42
TMEM39A-203ENST00000461654 HMGN5P82970 282 aaKnown RBP17.68■□□□□ 0.42
TMEM39A-203ENST00000461654 SPP2Q13103 211 aa17.68■□□□□ 0.42
TMEM39A-203ENST00000461654 SH3D19Q5HYK7 790 aa17.68■□□□□ 0.42
TMEM39A-203ENST00000461654 TATDN1Q6P1N9 297 aa17.68■□□□□ 0.42
TMEM39A-203ENST00000461654 PROCA1Q8NCQ7 364 aaPredicted RBP17.68■□□□□ 0.42
TMEM39A-203ENST00000461654 NUP133Q8WUM0 1156 aa17.68■□□□□ 0.42
TMEM39A-203ENST00000461654 ANKS1AQ92625 1134 aa17.68■□□□□ 0.42
TMEM39A-203ENST00000461654 DNAJC18Q9H819 358 aa17.68■□□□□ 0.42
TMEM39A-203ENST00000461654 AS3MTQ9HBK9 375 aa17.68■□□□□ 0.42
TMEM39A-203ENST00000461654 SENP2Q9HC62 589 aa17.68■□□□□ 0.42
TMEM39A-203ENST00000461654 CABP5Q9NP86 173 aa17.68■□□□□ 0.42
TMEM39A-203ENST00000461654 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.68■□□□□ 0.42
TMEM39A-203ENST00000461654 AGTPBP1Q9UPW5 1226 aa17.68■□□□□ 0.42
TMEM39A-203ENST00000461654 PLIN4Q96Q06 1357 aa17.67■□□□□ 0.42
TMEM39A-203ENST00000461654 CYP2C8P10632 490 aa17.67■□□□□ 0.42
TMEM39A-203ENST00000461654 PDIA4P13667 645 aaKnown RBP17.67■□□□□ 0.42
TMEM39A-203ENST00000461654 AKR1B1P15121 316 aa17.67■□□□□ 0.42
TMEM39A-203ENST00000461654 PDCP20941 246 aa17.67■□□□□ 0.42
TMEM39A-203ENST00000461654 NUCB2P80303 420 aa17.67■□□□□ 0.42
TMEM39A-203ENST00000461654 RTN1Q16799 776 aa17.67■□□□□ 0.42
TMEM39A-203ENST00000461654 ABCB5Q2M3G0 1257 aa17.67■□□□□ 0.42
TMEM39A-203ENST00000461654 GADL1Q6ZQY3 521 aa17.67■□□□□ 0.42
TMEM39A-203ENST00000461654 FAM184AQ8NB25 1140 aa17.67■□□□□ 0.42
TMEM39A-203ENST00000461654 NCOA5Q9HCD5 579 aaKnown RBP17.67■□□□□ 0.42
TMEM39A-203ENST00000461654 IL17RBQ9NRM6 502 aa17.67■□□□□ 0.42
TMEM39A-203ENST00000461654 SIPA1L1O43166 1804 aa17.66■□□□□ 0.42
TMEM39A-203ENST00000461654 TOP1P11387 765 aaKnown RBP17.66■□□□□ 0.42
TMEM39A-203ENST00000461654 GJB2P29033 226 aa17.66■□□□□ 0.42
TMEM39A-203ENST00000461654 CTGFP29279 349 aa17.66■□□□□ 0.42
TMEM39A-203ENST00000461654 KIF5BP33176 963 aa17.66■□□□□ 0.42
TMEM39A-203ENST00000461654 TMEM179Q6ZVK1 233 aa17.66■□□□□ 0.42
TMEM39A-203ENST00000461654 CCDC84Q86UT8 332 aaPredicted RBP17.66■□□□□ 0.42
TMEM39A-203ENST00000461654 RAB11FIP4Q86YS3 637 aa17.66■□□□□ 0.42
TMEM39A-203ENST00000461654 CTCFLQ8NI51 663 aaPredicted RBP17.66■□□□□ 0.42
TMEM39A-203ENST00000461654 ARHGAP39Q9C0H5 1083 aa17.66■□□□□ 0.42
TMEM39A-203ENST00000461654 RBM28Q9NW13 759 aaKnown RBP17.66■□□□□ 0.42
TMEM39A-203ENST00000461654 TTLL1O95922 423 aa17.65■□□□□ 0.42
TMEM39A-203ENST00000461654 RXRAP19793 462 aa17.65■□□□□ 0.42
TMEM39A-203ENST00000461654 HOXD10P28358 340 aa17.65■□□□□ 0.42
TMEM39A-203ENST00000461654 DDIT3P35638 169 aa17.65■□□□□ 0.42
TMEM39A-203ENST00000461654 PSMC4P43686 418 aa17.65■□□□□ 0.42
TMEM39A-203ENST00000461654 JAG1P78504 1218 aa17.65■□□□□ 0.42
TMEM39A-203ENST00000461654 ST3GAL1Q11201 340 aa17.65■□□□□ 0.42
TMEM39A-203ENST00000461654 RCSD1Q6JBY9 416 aa17.65■□□□□ 0.42
TMEM39A-203ENST00000461654 NBPF11Q86T75 865 aa17.65■□□□□ 0.42
TMEM39A-203ENST00000461654 CCDC144CPQ8IYA2 1237 aa17.65■□□□□ 0.42
TMEM39A-203ENST00000461654 FANCBQ8NB91 859 aa17.65■□□□□ 0.42
TMEM39A-203ENST00000461654 PNMA1Q8ND90 353 aa17.65■□□□□ 0.42
TMEM39A-203ENST00000461654 CEP95Q96GE4 821 aa17.65■□□□□ 0.42
TMEM39A-203ENST00000461654 MYL10Q9BUA6 226 aa17.65■□□□□ 0.42
TMEM39A-203ENST00000461654 KANSL2Q9H9L4 492 aa17.65■□□□□ 0.42
TMEM39A-203ENST00000461654 MTMR4Q9NYA4 1195 aa17.65■□□□□ 0.42
TMEM39A-203ENST00000461654 PTCH2Q9Y6C5 1203 aa17.65■□□□□ 0.42
TMEM39A-203ENST00000461654 NID2Q14112 1375 aa17.65■□□□□ 0.42
TMEM39A-203ENST00000461654 PTPDC1A2A3K4 754 aa17.64■□□□□ 0.41
TMEM39A-203ENST00000461654 C19orf81C9J6K1 198 aa17.64■□□□□ 0.41
TMEM39A-203ENST00000461654 BACE1P56817 501 aa17.64■□□□□ 0.41
TMEM39A-203ENST00000461654 TRIM47Q96LD4 638 aa17.64■□□□□ 0.41
TMEM39A-203ENST00000461654 TMEM47Q9BQJ4 181 aa17.64■□□□□ 0.41
TMEM39A-203ENST00000461654 SRRDQ9UH36 339 aa17.64■□□□□ 0.41
TMEM39A-203ENST00000461654 PNMA3Q9UL41 463 aa17.64■□□□□ 0.41
TMEM39A-203ENST00000461654 PTPRFP10586 1907 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms